More than 300 homologs were found in PanDaTox collection
for query gene PA14_27700 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_27700  putative transcriptional regulator  100 
 
 
241 aa  483  1e-135  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.0112492 
 
 
-
 
NC_007509  Bcep18194_C6981  cyclic nucleotide-binding domain-containing protein  43.4 
 
 
224 aa  164  1.0000000000000001e-39  Burkholderia sp. 383  Bacteria  normal  normal  0.691618 
 
 
-
 
NC_008390  Bamb_1214  cyclic nucleotide-binding protein  44.55 
 
 
275 aa  160  1e-38  Burkholderia ambifaria AMMD  Bacteria  normal  0.988172  n/a   
 
 
-
 
NC_010551  BamMC406_1241  cyclic nucleotide-binding protein  44.08 
 
 
224 aa  159  3e-38  Burkholderia ambifaria MC40-6  Bacteria  normal  0.357414  normal 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  32.12 
 
 
243 aa  101  1e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_009636  Smed_0098  CRP/FNR family transcriptional regulator  32.5 
 
 
234 aa  87.8  2e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.2435  normal 
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  33.84 
 
 
228 aa  87.4  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  30.28 
 
 
226 aa  87.4  2e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  32.31 
 
 
226 aa  87.4  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_011894  Mnod_3035  transcriptional regulator, Crp/Fnr family  35.29 
 
 
224 aa  85.1  0.000000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.738115  n/a   
 
 
-
 
NC_009485  BBta_0559  Crp/FNR family transcriptional regulator  28.04 
 
 
225 aa  81.6  0.00000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.338488  normal  0.42035 
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  30.45 
 
 
224 aa  80.9  0.00000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_007958  RPD_1005  cyclic nucleotide-binding  28.97 
 
 
226 aa  80.5  0.00000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.184599  normal  0.14907 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  33.49 
 
 
230 aa  80.1  0.00000000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2102  CRP/FNR family transcriptional regulator  28.57 
 
 
227 aa  78.2  0.0000000000001  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  30.48 
 
 
229 aa  77  0.0000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  32.98 
 
 
228 aa  76.3  0.0000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  24.64 
 
 
219 aa  75.9  0.0000000000006  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_009953  Sare_3499  Crp/FNR family transcriptional regulator  29.41 
 
 
230 aa  74.7  0.000000000001  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00506626 
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  28.37 
 
 
223 aa  74.3  0.000000000001  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_009380  Strop_3269  CRP/FNR family transcriptional regulator  29.41 
 
 
230 aa  73.6  0.000000000003  Salinispora tropica CNB-440  Bacteria  normal  0.883713  normal 
 
 
-
 
NC_008228  Patl_3367  Crp/FNR family transcriptional regulator  27.14 
 
 
230 aa  72.4  0.000000000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0894  cyclic nucleotide-binding  28.8 
 
 
226 aa  71.6  0.00000000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4520  transcriptional regulator, Crp/Fnr family  30.48 
 
 
236 aa  71.2  0.00000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_3161  cyclic nucleotide-binding protein  32.99 
 
 
230 aa  71.2  0.00000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  29.67 
 
 
248 aa  70.5  0.00000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  28.57 
 
 
225 aa  70.5  0.00000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013440  Hoch_4102  transcriptional regulator, Crp/Fnr family  27.92 
 
 
251 aa  70.9  0.00000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.363021  normal  0.0126572 
 
 
-
 
NC_012791  Vapar_2630  transcriptional regulator, Crp/Fnr family  27.36 
 
 
239 aa  70.5  0.00000000002  Variovorax paradoxus S110  Bacteria  decreased coverage  0.00642792  n/a   
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  27.4 
 
 
245 aa  70.1  0.00000000003  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3629  Crp/FNR family transcriptional regulator  29.96 
 
 
263 aa  70.1  0.00000000003  Frankia sp. CcI3  Bacteria  normal  normal  0.332638 
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  26.94 
 
 
231 aa  69.7  0.00000000004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1844  CRP/FNR family transcriptional regulator  26.61 
 
 
240 aa  69.7  0.00000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.128261  normal  0.368407 
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  28.79 
 
 
224 aa  69.7  0.00000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  28.44 
 
 
227 aa  68.9  0.00000000006  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  28.77 
 
 
237 aa  69.3  0.00000000006  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  28.5 
 
 
222 aa  68.9  0.00000000007  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_009511  Swit_2706  Crp/FNR family transcriptional regulator  33.53 
 
 
228 aa  68.2  0.0000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.154877  normal 
 
 
-
 
NC_009921  Franean1_1101  Crp/FNR family transcriptional regulator  28.69 
 
 
246 aa  68.6  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  27.03 
 
 
229 aa  68.2  0.0000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  27.73 
 
 
224 aa  68.2  0.0000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3075  Crp/FNR family transcriptional regulator  27.7 
 
 
239 aa  67.8  0.0000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.193734 
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  26.11 
 
 
225 aa  66.6  0.0000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_007794  Saro_2016  Crp/FNR family transcriptional regulator  29.7 
 
 
229 aa  66.6  0.0000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0776172  n/a   
 
 
-
 
NC_007948  Bpro_3800  Crp/FNR family transcriptional regulator  27.88 
 
 
225 aa  67  0.0000000003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3781  transcriptional regulator, Crp/Fnr family  32.98 
 
 
230 aa  65.9  0.0000000005  Ralstonia pickettii 12D  Bacteria  normal  0.505907  normal 
 
 
-
 
NC_010678  Rpic_4858  transcriptional regulator, Crp/Fnr family  32.98 
 
 
230 aa  65.9  0.0000000005  Ralstonia pickettii 12J  Bacteria  normal  normal  0.748285 
 
 
-
 
NC_013947  Snas_5052  transcriptional regulator, Crp/Fnr family  27.48 
 
 
228 aa  65.9  0.0000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.267336 
 
 
-
 
NC_011138  MADE_01198  cyclic nucleotide-binding protein  29.65 
 
 
229 aa  65.5  0.0000000007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0595  CRP/FNR family transcriptional regulator  27.88 
 
 
228 aa  65.5  0.0000000007  Roseiflexus sp. RS-1  Bacteria  normal  0.130469  unclonable  0.00000708114 
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  27.35 
 
 
225 aa  65.1  0.0000000009  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  28.7 
 
 
226 aa  64.7  0.000000001  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_012856  Rpic12D_3062  transcriptional regulator, Crp/Fnr family  29.85 
 
 
232 aa  64.7  0.000000001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  28.51 
 
 
229 aa  64.7  0.000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1779  Crp/FNR family transcriptional regulator  28 
 
 
239 aa  65.1  0.000000001  Acidovorax sp. JS42  Bacteria  normal  0.72161  normal 
 
 
-
 
NC_011662  Tmz1t_2638  transcriptional regulator, Crp/Fnr family  25.23 
 
 
222 aa  64.3  0.000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  28.18 
 
 
253 aa  64.3  0.000000002  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_010682  Rpic_3408  transcriptional regulator, Crp/Fnr family  29.85 
 
 
243 aa  63.9  0.000000002  Ralstonia pickettii 12J  Bacteria  normal  normal  0.258046 
 
 
-
 
NC_014151  Cfla_3095  transcriptional regulator, Crp/Fnr family  28.57 
 
 
220 aa  63.5  0.000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000148221 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  28.41 
 
 
227 aa  63.5  0.000000003  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  23.98 
 
 
226 aa  63.5  0.000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  24.09 
 
 
225 aa  63.5  0.000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  25.91 
 
 
225 aa  63.2  0.000000004  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  26.27 
 
 
227 aa  63.2  0.000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  26.69 
 
 
231 aa  63.2  0.000000004  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  25.7 
 
 
220 aa  62.4  0.000000006  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_014212  Mesil_0258  transcriptional regulator, Crp/Fnr family  30.18 
 
 
222 aa  62.4  0.000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_26230  cAMP-binding protein  26.06 
 
 
225 aa  62.4  0.000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.466611  n/a   
 
 
-
 
NC_011992  Dtpsy_1943  transcriptional regulator, Crp/Fnr family  27.5 
 
 
239 aa  62.4  0.000000006  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0117  cyclic nucleotide-binding: regulatory protein, Crp  27.8 
 
 
228 aa  62.4  0.000000007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1297  Crp/FNR family transcriptional regulator  27.49 
 
 
222 aa  61.6  0.000000009  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  26.09 
 
 
254 aa  61.6  0.00000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  27.63 
 
 
233 aa  61.6  0.00000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  29.41 
 
 
243 aa  61.2  0.00000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  26.36 
 
 
225 aa  61.2  0.00000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_012918  GM21_3198  transcriptional regulator, Crp/Fnr family  26.54 
 
 
221 aa  60.8  0.00000002  Geobacter sp. M21  Bacteria  n/a    normal  0.90573 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  27.81 
 
 
242 aa  60.8  0.00000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  25.45 
 
 
230 aa  60.5  0.00000002  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  25.45 
 
 
241 aa  60.1  0.00000003  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  28.7 
 
 
226 aa  60.1  0.00000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4994  cyclic nucleotide-binding protein  25.57 
 
 
247 aa  60.1  0.00000003  Delftia acidovorans SPH-1  Bacteria  normal  0.103725  normal 
 
 
-
 
NC_007948  Bpro_2959  Crp/FNR family transcriptional regulator  27.44 
 
 
241 aa  60.5  0.00000003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1063  transcriptional regulator, Crp/Fnr family  28.07 
 
 
238 aa  60.1  0.00000003  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0608  transcriptional regulator, Crp/Fnr family  27.92 
 
 
225 aa  60.1  0.00000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.847542  normal 
 
 
-
 
NC_010002  Daci_3287  Crp/FNR family transcriptional regulator  26.76 
 
 
239 aa  60.1  0.00000003  Delftia acidovorans SPH-1  Bacteria  normal  0.370075  normal  0.683237 
 
 
-
 
NC_012791  Vapar_3129  transcriptional regulator, Crp/Fnr family  29.11 
 
 
224 aa  60.1  0.00000003  Variovorax paradoxus S110  Bacteria  normal  0.0256895  n/a   
 
 
-
 
NC_009511  Swit_3029  CRP/FNR family transcriptional regulator  27.49 
 
 
228 aa  59.7  0.00000004  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  27.75 
 
 
225 aa  59.7  0.00000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  29.33 
 
 
254 aa  59.7  0.00000004  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0906  Crp/FNR family transcriptional regulator  28.24 
 
 
238 aa  59.7  0.00000004  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  25.45 
 
 
225 aa  59.7  0.00000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  25.91 
 
 
229 aa  59.7  0.00000004  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_008825  Mpe_A1119  catabolite gene activator (cAMP receptor protein) (cAMP-regulatory protein)  26.11 
 
 
222 aa  59.3  0.00000005  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.106899 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  25.45 
 
 
225 aa  59.3  0.00000005  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  27.59 
 
 
240 aa  59.3  0.00000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  25.71 
 
 
222 aa  58.9  0.00000006  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  26.27 
 
 
229 aa  58.9  0.00000007  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  26.87 
 
 
228 aa  58.5  0.0000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3158  transcriptional regulator, Crp/Fnr family  23.38 
 
 
223 aa  58.5  0.0000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  24.04 
 
 
231 aa  57.4  0.0000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
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