55 homologs were found in PanDaTox collection
for query gene PA14_01770 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_01770  putative nucleoside-binding outer membrane protein  100 
 
 
282 aa  578  1e-164  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0718  normal  0.572812 
 
 
-
 
NC_007963  Csal_0110  nucleoside-specific channel-forming protein, Tsx  39.27 
 
 
289 aa  221  1.9999999999999999e-56  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002697  outer membrane protein OmpK  38.25 
 
 
272 aa  169  4e-41  Vibrio sp. Ex25  Bacteria  normal  0.302081  n/a   
 
 
-
 
NC_009783  VIBHAR_03287  hypothetical protein  39.04 
 
 
273 aa  168  1e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_2816  nucleoside-specific channel-forming protein, Tsx  38.79 
 
 
277 aa  160  2e-38  Shewanella loihica PV-4  Bacteria  unclonable  0.0000000631711  unclonable  0.00000283394 
 
 
-
 
NC_004347  SO_1215  outer membrane protein OmpK, putative  37.41 
 
 
283 aa  155  5.0000000000000005e-37  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_3757  nucleoside-specific channel-forming protein, Tsx  40 
 
 
319 aa  154  1e-36  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3379  nucleoside-specific channel-forming protein, Tsx  35.16 
 
 
278 aa  154  2e-36  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000573921  hitchhiker  0.00247146 
 
 
-
 
NC_010506  Swoo_3550  nucleoside-specific channel-forming protein Tsx  38.13 
 
 
277 aa  152  5e-36  Shewanella woodyi ATCC 51908  Bacteria  unclonable  0.000000115802  decreased coverage  0.000000668539 
 
 
-
 
NC_009901  Spea_3049  nucleoside-specific channel-forming protein Tsx  38.17 
 
 
287 aa  148  9e-35  Shewanella pealeana ATCC 700345  Bacteria  unclonable  0.00000000184608  n/a   
 
 
-
 
NC_012917  PC1_3573  nucleoside-specific channel-forming protein Tsx  35.62 
 
 
286 aa  148  1.0000000000000001e-34  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.772906  n/a   
 
 
-
 
NC_008321  Shewmr4_1036  nucleoside-specific channel-forming protein, Tsx  36.75 
 
 
279 aa  147  2.0000000000000003e-34  Shewanella sp. MR-4  Bacteria  unclonable  0.0000000103481  unclonable  0.0000000000147865 
 
 
-
 
NC_008322  Shewmr7_1101  nucleoside-specific channel-forming protein, Tsx  36.75 
 
 
279 aa  147  2.0000000000000003e-34  Shewanella sp. MR-7  Bacteria  unclonable  0.00000152935  unclonable  0.0000213544 
 
 
-
 
NC_004578  PSPTO_4122  nucleoside-specific channel-forming protein  39.18 
 
 
304 aa  146  3e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1001  nucleoside-specific channel-forming protein, Tsx  34.03 
 
 
279 aa  146  4.0000000000000006e-34  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000919402  n/a   
 
 
 
NC_007005  Psyr_3858  nucleoside-specific channel-forming protein, Tsx  39.18 
 
 
319 aa  145  6e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.297258 
 
 
-
 
NC_007954  Sden_1024  nucleoside-specific channel-forming protein, Tsx  32.99 
 
 
295 aa  145  6e-34  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000000282973  n/a   
 
 
-
 
NC_008577  Shewana3_1040  nucleoside-specific channel-forming protein, Tsx  36.29 
 
 
279 aa  145  9e-34  Shewanella sp. ANA-3  Bacteria  unclonable  0.0000000125932  unclonable  0.0000000000727651 
 
 
-
 
NC_009832  Spro_2072  nucleoside-specific channel-forming protein Tsx  34.85 
 
 
293 aa  144  1e-33  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1139  nucleoside-specific channel-forming protein Tsx  37.71 
 
 
283 aa  144  1e-33  Shewanella baltica OS223  Bacteria  hitchhiker  0.0000000567301  unclonable  0.00000000000471998 
 
 
-
 
NC_010498  EcSMS35_4384  nucleoside-specific channel-forming protein Tsx  36.16 
 
 
286 aa  144  2e-33  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.605519 
 
 
-
 
NC_009665  Shew185_3231  nucleoside-specific channel-forming protein Tsx  36.55 
 
 
285 aa  143  4e-33  Shewanella baltica OS185  Bacteria  unclonable  0.00000000002039  n/a   
 
 
-
 
NC_009438  Sputcn32_2823  nucleoside-specific channel-forming protein, Tsx  35.9 
 
 
279 aa  143  4e-33  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000000000597906  n/a   
 
 
-
 
NC_009457  VC0395_A1893  nucleoside-specific channel-forming protein  36.61 
 
 
296 aa  142  6e-33  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0879  nucleoside-specific channel-forming protein, Tsx  33.09 
 
 
294 aa  141  9.999999999999999e-33  Enterobacter sp. 638  Bacteria  normal  0.543775  normal 
 
 
-
 
NC_009052  Sbal_3228  nucleoside-specific channel-forming protein Tsx  36.61 
 
 
301 aa  141  9.999999999999999e-33  Shewanella baltica OS155  Bacteria  unclonable  0.00000000169174  n/a   
 
 
-
 
NC_012912  Dd1591_0629  nucleoside-specific channel-forming protein Tsx  32.65 
 
 
287 aa  140  1.9999999999999998e-32  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3367  nucleoside-specific channel-forming protein Tsx  35.68 
 
 
289 aa  140  3e-32  Shewanella baltica OS195  Bacteria  unclonable  0.000000101971  hitchhiker  0.00176833 
 
 
-
 
NC_013421  Pecwa_3759  Nucleoside-specific channel-forming protein, Tsx-like protein  36.33 
 
 
270 aa  139  3.9999999999999997e-32  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A0453  nucleoside-specific channel-forming protein tsx  34.35 
 
 
287 aa  139  6e-32  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B0451  nucleoside-specific channel-forming protein tsx  34.35 
 
 
287 aa  139  6e-32  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0471  nucleoside-specific channel-forming protein tsx  34.35 
 
 
287 aa  139  6e-32  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0513  nucleoside-specific channel-forming protein tsx  34.35 
 
 
287 aa  139  6e-32  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0459  nucleoside-specific channel-forming protein tsx  34.35 
 
 
287 aa  139  6e-32  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0668  nucleoside-specific channel-forming protein Tsx  31.86 
 
 
287 aa  135  9e-31  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0493  nucleoside-specific channel-forming protein Tsx  32.88 
 
 
294 aa  134  1.9999999999999998e-30  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.521942  normal 
 
 
-
 
NC_010498  EcSMS35_0445  nucleoside-specific channel-forming protein Tsx  32.88 
 
 
294 aa  134  1.9999999999999998e-30  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_3222  nucleoside-specific channel-forming protein Tsx  32.88 
 
 
294 aa  134  1.9999999999999998e-30  Escherichia coli ATCC 8739  Bacteria  normal  0.904335  hitchhiker  0.00000141914 
 
 
-
 
NC_012892  B21_00363  hypothetical protein  32.88 
 
 
294 aa  134  1.9999999999999998e-30  Escherichia coli BL21  Bacteria  normal  0.502644  n/a   
 
 
-
 
NC_009801  EcE24377A_0442  nucleoside-specific channel-forming protein  32.88 
 
 
294 aa  134  1.9999999999999998e-30  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0482  nucleoside-specific channel-forming protein  32.88 
 
 
294 aa  134  1.9999999999999998e-30  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00359  nucleoside channel, receptor of phage T6 and colicin K  32.88 
 
 
294 aa  134  1.9999999999999998e-30  Escherichia coli BL21(DE3)  Bacteria  normal  0.527354  n/a   
 
 
-
 
CP001637  EcDH1_3198  nucleoside-specific channel-forming protein Tsx  32.88 
 
 
294 aa  134  1.9999999999999998e-30  Escherichia coli DH1  Bacteria  normal  0.0134636  n/a   
 
 
-
 
NC_010658  SbBS512_E0332  nucleoside-specific channel-forming protein Tsx  32.54 
 
 
294 aa  132  6e-30  Shigella boydii CDC 3083-94  Bacteria  normal  0.188825  n/a   
 
 
-
 
NC_009439  Pmen_3697  nucleoside-binding outer membrane protein-like protein  30.3 
 
 
266 aa  46.2  0.0005  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4131  hypothetical protein  26.76 
 
 
250 aa  44.3  0.002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_02060  hypothetical protein  28.07 
 
 
278 aa  44.7  0.002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.520939  normal  0.571612 
 
 
-
 
NC_008345  Sfri_3402  hypothetical protein  29.66 
 
 
250 aa  44.7  0.002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0544  hypothetical protein  25.5 
 
 
250 aa  44.3  0.002  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000326106  n/a   
 
 
-
 
NC_009656  PSPA7_0245  hypothetical protein  28.07 
 
 
278 aa  44.7  0.002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0194  hypothetical protein  28.03 
 
 
278 aa  43.9  0.003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.7975  normal  0.0633994 
 
 
-
 
NC_009439  Pmen_2763  nucleoside-binding outer membrane protein-like protein  28.26 
 
 
286 aa  43.5  0.003  Pseudomonas mendocina ymp  Bacteria  normal  0.251865  normal  0.794833 
 
 
-
 
NC_011663  Sbal223_0492  nucleoside-specific channel-forming protein Tsx  25.35 
 
 
250 aa  43.5  0.004  Shewanella baltica OS223  Bacteria  decreased coverage  0.000160917  normal 
 
 
-
 
NC_009052  Sbal_3851  hypothetical protein  25.35 
 
 
250 aa  43.5  0.004  Shewanella baltica OS155  Bacteria  normal  0.0452291  n/a   
 
 
-
 
NC_007954  Sden_3073  hypothetical protein  26.22 
 
 
251 aa  42.4  0.009  Shewanella denitrificans OS217  Bacteria  normal  0.0238375  n/a   
 
 
-
 
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