More than 300 homologs were found in PanDaTox collection
for query gene Oter_4415 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_4415  AraC family transcriptional regulator  100 
 
 
303 aa  613  9.999999999999999e-175  Opitutus terrae PB90-1  Bacteria  hitchhiker  0.0031509  normal  0.543799 
 
 
-
 
NC_010571  Oter_4074  AraC family transcriptional regulator  54.04 
 
 
290 aa  324  9e-88  Opitutus terrae PB90-1  Bacteria  normal  normal  0.63505 
 
 
-
 
NC_010571  Oter_1732  AraC family transcriptional regulator  49.82 
 
 
323 aa  289  3e-77  Opitutus terrae PB90-1  Bacteria  normal  0.0413947  normal 
 
 
-
 
NC_010571  Oter_4426  AraC family transcriptional regulator  29.55 
 
 
290 aa  115  1.0000000000000001e-24  Opitutus terrae PB90-1  Bacteria  normal  normal  0.378526 
 
 
-
 
NC_012034  Athe_0937  transcriptional regulator, AraC family  27.09 
 
 
291 aa  113  3e-24  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.440102  n/a   
 
 
-
 
NC_010001  Cphy_3861  two component AraC family transcriptional regulator  31.69 
 
 
259 aa  89.7  6e-17  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1958  response regulator receiver protein  37.4 
 
 
530 aa  89.4  7e-17  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000471781  n/a   
 
 
-
 
NC_010320  Teth514_0224  response regulator receiver protein  31.78 
 
 
537 aa  88.6  1e-16  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3156  two component transcriptional regulator, AraC family  32.89 
 
 
515 aa  87.8  2e-16  Geobacillus sp. WCH70  Bacteria  normal  0.949308  n/a   
 
 
-
 
NC_011094  SeSA_A2206  regulatory protein PocR  25.2 
 
 
303 aa  87  3e-16  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.742166  normal 
 
 
-
 
NC_011205  SeD_A2372  regulatory protein PocR  26.05 
 
 
303 aa  86.3  6e-16  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.740068  normal 
 
 
-
 
NC_011149  SeAg_B2159  regulatory protein PocR  26.05 
 
 
303 aa  86.3  6e-16  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.385139  n/a   
 
 
-
 
NC_011080  SNSL254_A2213  regulatory protein PocR  26.05 
 
 
303 aa  86.3  6e-16  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.639643  normal 
 
 
-
 
NC_011083  SeHA_C2259  regulatory protein PocR  26.05 
 
 
303 aa  86.3  6e-16  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.746184  normal  0.221956 
 
 
-
 
NC_009801  EcE24377A_2277  regulatory protein PocR  25.97 
 
 
304 aa  85.9  7e-16  Escherichia coli E24377A  Bacteria  hitchhiker  0.000774305  n/a   
 
 
-
 
NC_011898  Ccel_0944  two component transcriptional regulator, AraC family  38.61 
 
 
539 aa  85.5  0.000000000000001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007412  Ava_C0027  AraC family transcriptional regulator  41.3 
 
 
299 aa  83.6  0.000000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.618912  normal  0.0626425 
 
 
-
 
NC_010001  Cphy_0293  two component AraC family transcriptional regulator  36.28 
 
 
532 aa  82  0.00000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2641  AraC family transcriptional regulator  38.71 
 
 
301 aa  81.6  0.00000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_1982  two component transcriptional regulator, AraC family  31.25 
 
 
544 aa  81.3  0.00000000000002  Clostridium cellulolyticum H10  Bacteria  normal  0.184696  n/a   
 
 
-
 
NC_012034  Athe_0102  two component transcriptional regulator, AraC family  36.27 
 
 
519 aa  80.9  0.00000000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2105  putative sigma54 specific transcriptional regulator  41.18 
 
 
497 aa  80.5  0.00000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.619214  normal  0.0553697 
 
 
-
 
NC_013411  GYMC61_2718  two component transcriptional regulator, AraC family  36.7 
 
 
259 aa  80.1  0.00000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_0399  response regulator receiver protein  27.84 
 
 
365 aa  79.7  0.00000000000005  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3282  two component AraC family transcriptional regulator  36.36 
 
 
535 aa  79.7  0.00000000000006  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2369  transcriptional regulator  43 
 
 
368 aa  79.3  0.00000000000006  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1583  two component AraC family transcriptional regulator  31.91 
 
 
533 aa  79.7  0.00000000000006  Clostridium phytofermentans ISDg  Bacteria  normal  0.160886  n/a   
 
 
-
 
NC_011898  Ccel_2113  two component transcriptional regulator, AraC family  23.78 
 
 
538 aa  79.7  0.00000000000006  Clostridium cellulolyticum H10  Bacteria  normal  0.141697  n/a   
 
 
-
 
NC_013889  TK90_2326  transcriptional regulator, AraC family  36.15 
 
 
295 aa  79  0.00000000000009  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0937352 
 
 
-
 
NC_007644  Moth_2113  two component AraC family transcriptional regulator  35.04 
 
 
548 aa  79  0.00000000000009  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2161  helix-turn-helix domain-containing protein  39.5 
 
 
294 aa  79  0.00000000000009  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_42360  transcriptional regulator, AraC family  37.5 
 
 
318 aa  78.6  0.0000000000001  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0251  AraC family transcriptional regulator  41.49 
 
 
309 aa  78.2  0.0000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2058  transcriptional regulator, AraC family  29.17 
 
 
286 aa  79  0.0000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2634  AraC family transcriptional regulator  36.89 
 
 
204 aa  78.6  0.0000000000001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3979  two component transcriptional regulator, AraC family  35.64 
 
 
348 aa  77.8  0.0000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0835  AraC family transcriptional regulator  37.76 
 
 
306 aa  77.8  0.0000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.283236  n/a   
 
 
-
 
NC_009620  Smed_4732  helix-turn-helix domain-containing protein  41.41 
 
 
293 aa  77.4  0.0000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.0052536 
 
 
-
 
NC_009012  Cthe_3164  two component AraC family transcriptional regulator  34.29 
 
 
544 aa  77  0.0000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0633186  n/a   
 
 
-
 
NC_010501  PputW619_2042  AraC family transcriptional regulator  37.37 
 
 
301 aa  77.4  0.0000000000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3305  two component transcriptional regulator, AraC family  33.63 
 
 
513 aa  77.4  0.0000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1228  two component transcriptional regulator, AraC family  35.92 
 
 
532 aa  77  0.0000000000003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2708  transcriptional activator MltR  35.83 
 
 
301 aa  76.6  0.0000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.215541  n/a   
 
 
-
 
NC_010524  Lcho_3182  AraC family transcriptional regulator  40 
 
 
315 aa  77  0.0000000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000265571 
 
 
-
 
NC_008228  Patl_3778  AraC family transcriptional regulator  39.39 
 
 
329 aa  76.6  0.0000000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3787  transcriptional regulator  33.33 
 
 
321 aa  77  0.0000000000004  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.113221 
 
 
-
 
NC_009483  Gura_3104  response regulator receiver protein  32.04 
 
 
266 aa  76.6  0.0000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3869  AraC family transcriptional regulator  39.39 
 
 
304 aa  76.3  0.0000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2441  helix-turn-helix, AraC type  35.83 
 
 
307 aa  76.3  0.0000000000007  Pseudomonas syringae pv. syringae B728a  Bacteria  decreased coverage  0.0002572  decreased coverage  0.000290212 
 
 
-
 
NC_010001  Cphy_3405  two component AraC family transcriptional regulator  35.71 
 
 
253 aa  75.9  0.0000000000009  Clostridium phytofermentans ISDg  Bacteria  normal  0.100445  n/a   
 
 
-
 
NC_009654  Mmwyl1_1089  helix-turn-helix domain-containing protein  30.97 
 
 
298 aa  75.9  0.0000000000009  Marinomonas sp. MWYL1  Bacteria  normal  0.99301  hitchhiker  0.00294409 
 
 
-
 
NC_011830  Dhaf_4320  transcriptional regulator, AraC family  34.95 
 
 
427 aa  75.5  0.0000000000009  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1891  transcriptional regulator, AraC family  32.85 
 
 
291 aa  75.1  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3034  two component AraC family transcriptional regulator  29.79 
 
 
556 aa  75.1  0.000000000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00618221  n/a   
 
 
-
 
NC_012560  Avin_27420  transcriptional regulator MtlR (AraC family)  39.8 
 
 
299 aa  75.1  0.000000000001  Azotobacter vinelandii DJ  Bacteria  normal  0.467419  n/a   
 
 
-
 
NC_013132  Cpin_2426  transcriptional regulator, AraC family  33.96 
 
 
326 aa  75.5  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.971153  normal  0.0916341 
 
 
-
 
NC_009439  Pmen_4467  AraC family transcriptional regulator  36.73 
 
 
301 aa  75.5  0.000000000001  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_0410  two component transcriptional regulator, AraC family  40.78 
 
 
233 aa  74.7  0.000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_3249  two component transcriptional regulator, AraC family  34 
 
 
531 aa  74.3  0.000000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2926  transcriptional regulator MtlR  36.73 
 
 
287 aa  74.3  0.000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.795893  n/a   
 
 
-
 
NC_008463  PA14_34440  transcriptional regulator MtlR  36.73 
 
 
301 aa  74.3  0.000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0000000000688741  normal  0.560291 
 
 
-
 
NC_013037  Dfer_2104  transcriptional regulator, AraC family  40.38 
 
 
298 aa  75.1  0.000000000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.244646 
 
 
-
 
NC_010001  Cphy_3697  two component AraC family transcriptional regulator  34.26 
 
 
517 aa  73.9  0.000000000003  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000611836  n/a   
 
 
-
 
NC_006274  BCZK2914  methylphosphotriester-DNA alkyltransferase  34.78 
 
 
198 aa  73.6  0.000000000004  Bacillus cereus E33L  Bacteria  normal  0.431589  n/a   
 
 
-
 
NC_009012  Cthe_2212  AraC family transcriptional regulator  37.23 
 
 
302 aa  73.6  0.000000000004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2467  two component transcriptional regulator, AraC family  36.08 
 
 
251 aa  73.2  0.000000000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0937  transcriptional regulator, AraC family  35.2 
 
 
291 aa  72.8  0.000000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.127184  normal 
 
 
-
 
NC_012034  Athe_2033  transcriptional regulator, AraC family  39.08 
 
 
267 aa  72.8  0.000000000007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0125  transcriptional regulator, AraC family  35.71 
 
 
288 aa  72.4  0.000000000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_15370  helix-turn-helix- domain containing protein AraC type  29.1 
 
 
415 aa  72.4  0.000000000008  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3221  transcriptional regulator, AraC family  33.91 
 
 
198 aa  72.4  0.000000000009  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008261  CPF_1111  AraC family transcriptional regulator  31.03 
 
 
506 aa  72.4  0.000000000009  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.0000128485  n/a   
 
 
-
 
NC_010622  Bphy_0499  AraC family transcriptional regulator  35.78 
 
 
339 aa  72  0.00000000001  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00811586 
 
 
-
 
NC_011886  Achl_1710  transcriptional regulator, AraC family  43.02 
 
 
326 aa  72  0.00000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.492868 
 
 
-
 
NC_011729  PCC7424_1148  transcriptional regulator, AraC family  35.79 
 
 
309 aa  71.6  0.00000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008261  CPF_1172  AraC family DNA-binding response regulator  32.71 
 
 
250 aa  72.4  0.00000000001  Clostridium perfringens ATCC 13124  Bacteria  normal  0.409048  n/a   
 
 
-
 
NC_011772  BCG9842_B2642  transcriptional regulator, AraC family  34.78 
 
 
198 aa  72  0.00000000001  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000194016 
 
 
-
 
NC_008786  Veis_3165  helix-turn-helix domain-containing protein  30.54 
 
 
308 aa  72  0.00000000001  Verminephrobacter eiseniae EF01-2  Bacteria  hitchhiker  0.00840402  normal 
 
 
-
 
NC_010552  BamMC406_4632  AraC family transcriptional regulator  29.1 
 
 
316 aa  72  0.00000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.569454  normal 
 
 
-
 
NC_012852  Rleg_6086  transcriptional regulator, AraC family  36.79 
 
 
288 aa  71.2  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.993456 
 
 
-
 
NC_010625  Bphy_5694  AraC family transcriptional regulator  29.35 
 
 
319 aa  70.9  0.00000000002  Burkholderia phymatum STM815  Bacteria  normal  0.730665  normal  0.260224 
 
 
-
 
NC_011004  Rpal_1524  transcriptional regulator, AraC family  35.35 
 
 
301 aa  71.2  0.00000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.753144  n/a   
 
 
-
 
NC_007963  Csal_2607  AraC family transcriptional regulator  32.05 
 
 
303 aa  71.6  0.00000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.334421  n/a   
 
 
-
 
NC_008262  CPR_1003  DNA-binding response regulator  31.78 
 
 
250 aa  71.2  0.00000000002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0530  transcriptional regulator, AraC family  37.72 
 
 
292 aa  71.2  0.00000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.285537 
 
 
-
 
NC_012034  Athe_2055  two component transcriptional regulator, AraC family  28.48 
 
 
519 aa  71.2  0.00000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2123  two component AraC family transcriptional regulator  40.7 
 
 
414 aa  71.6  0.00000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.331776  n/a   
 
 
-
 
NC_009439  Pmen_1650  AraC family transcriptional regulator  36.46 
 
 
316 aa  71.6  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2890  transcriptional regulator, AraC family  37.23 
 
 
300 aa  70.9  0.00000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.178075  n/a   
 
 
-
 
NC_013730  Slin_3263  transcriptional regulator, AraC family  32.5 
 
 
326 aa  70.5  0.00000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.380473 
 
 
-
 
NC_010001  Cphy_0464  AraC family transcriptional regulator  37.36 
 
 
259 aa  70.9  0.00000000003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_7037  AraC family transcriptional regulator  36.08 
 
 
301 aa  70.5  0.00000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.283867  normal  0.289972 
 
 
-
 
NC_010338  Caul_0624  AraC family transcriptional regulator  37.5 
 
 
299 aa  70.5  0.00000000003  Caulobacter sp. K31  Bacteria  normal  normal  0.401422 
 
 
-
 
NC_008751  Dvul_0479  AraC family transcriptional regulator  35.61 
 
 
279 aa  70.9  0.00000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  hitchhiker  0.00109362 
 
 
-
 
NC_012792  Vapar_6144  transcriptional regulator, AraC family  36 
 
 
301 aa  70.5  0.00000000003  Variovorax paradoxus S110  Bacteria  normal  0.185797  n/a   
 
 
-
 
NC_014212  Mesil_1022  transcriptional regulator, AraC family  41.84 
 
 
145 aa  70.9  0.00000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  0.532062  normal  0.274495 
 
 
-
 
NC_011830  Dhaf_2638  transcriptional regulator, AraC family  36.36 
 
 
282 aa  70.1  0.00000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_1458  AraC family transcriptional regulator  34.86 
 
 
301 aa  70.5  0.00000000004  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4301  transcriptional regulator, AraC family  31.73 
 
 
286 aa  70.1  0.00000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.220521  normal  0.797318 
 
 
-
 
NC_008544  Bcen2424_6370  AraC family transcriptional regulator  34.86 
 
 
301 aa  70.5  0.00000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
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