20 homologs were found in PanDaTox collection
for query gene Noca_1722 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008699  Noca_1722  helix-turn-helix domain-containing protein  100 
 
 		 204 aa  408  1e-113  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
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NC_008699  Noca_1101  helix-turn-helix domain-containing protein  92.46 
 
 		 316 aa  375  1e-103  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
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NC_007777  Francci3_0807  XRE family transcriptional regulator  36.71 
 
 		 169 aa  93.6  2e-18  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
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NC_013124  Afer_0033  transcriptional regulator, XRE family  44.64 
 
 		 169 aa  49.3  0.00004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.400371  n/a   
 
 
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NC_013172  Bfae_17690  UDP-N-acetylglucosamine 1-carboxyvinyltransferase  42.59 
 
 		 517 aa  46.6  0.0003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.356525  n/a   
 
 
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NC_011830  Dhaf_4562  transcriptional regulator, XRE family  37.7 
 
 		 98 aa  45.8  0.0004  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00197637  n/a   
 
 
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NC_013521  Sked_13300  UDP-N-acetylglucosamine 1-carboxyvinyltransferase  46.3 
 
 		 509 aa  45.1  0.0007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.801467  normal  0.209244 
 
 
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NC_013721  HMPREF0424_1165  toxin-antitoxin system, antitoxin component, Xre family  37.74 
 
 		 94 aa  43.9  0.002  Gardnerella vaginalis 409-05  Bacteria  n/a    decreased coverage  0.00000000604987 
 
 
-
 
NC_010333  Caul_5447  XRE family transcriptional regulator  50 
 
 		 103 aa  43.5  0.002  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
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NC_013739  Cwoe_2651  transcriptional regulator, XRE family  37.29 
 
 		 112 aa  43.1  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.524838 
 
 
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NC_011146  Gbem_1829  transcriptional regulator, XRE family  41.67 
 
 		 103 aa  43.1  0.003  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1535  transcriptional regulator, LacI family  37.93 
 
 		 465 aa  42.7  0.004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.38669  decreased coverage  0.00974115 
 
 
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NC_013385  Adeg_1361  transcriptional regulator, XRE family  40.43 
 
 		 93 aa  42.7  0.004  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_3620  transcriptional regulator, XRE family  37.5 
 
 		 99 aa  42  0.006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.494695  n/a   
 
 
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NC_013595  Sros_8282  putative transcriptional regulator, XRE family  48.15 
 
 		 92 aa  42  0.006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.145655  normal  0.802866 
 
 
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NC_012918  GM21_2419  transcriptional regulator, XRE family  40 
 
 		 104 aa  42  0.007  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013757  Gobs_3103  transcriptional regulator, XRE family  44.9 
 
 		 503 aa  41.6  0.008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.597911  n/a   
 
 
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NC_014148  Plim_2143  helix-turn-helix domain protein  51.28 
 
 		 82 aa  41.6  0.009  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
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NC_009440  Msed_1598  helix-turn-helix domain-containing protein  30.4 
 
 		 241 aa  41.2  0.009  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  0.141613 
 
 
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NC_007953  Bxe_C0772  transcriptional regulator  35.29 
 
 		 204 aa  41.2  0.01  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.855503 
 
 
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