16 homologs were found in PanDaTox collection
for query gene Noca_0713 on replicon NC_008699
Organism: Nocardioides sp. JS614



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008699  Noca_0713  hypothetical protein  100 
 
 
167 aa  337  5e-92  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0809  hypothetical protein  33.81 
 
 
220 aa  79.3  0.00000000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.612305  n/a   
 
 
-
 
NC_013159  Svir_03420  hypothetical protein  33.6 
 
 
224 aa  75.1  0.0000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.151092  normal 
 
 
-
 
NC_014210  Ndas_3561  hypothetical protein  33.6 
 
 
215 aa  69.7  0.00000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.732153 
 
 
-
 
NC_008541  Arth_0626  putative secreted lipoprotein  31.11 
 
 
213 aa  68.6  0.00000000004  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0724  hypothetical protein  32.35 
 
 
219 aa  57  0.0000001  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00634276  normal  0.0883262 
 
 
-
 
NC_013093  Amir_2470  hypothetical protein  30 
 
 
215 aa  56.2  0.0000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0753  putative secreted lipoprotein  30.15 
 
 
213 aa  54.3  0.0000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00793429 
 
 
-
 
NC_013093  Amir_0503  hypothetical protein  28.26 
 
 
178 aa  48.5  0.00005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3513  hypothetical protein  29.81 
 
 
251 aa  44.7  0.0006  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0554  peptidase C14, caspase catalytic subunit P20  32.54 
 
 
224 aa  42.7  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.210813  n/a   
 
 
-
 
NC_009074  BURPS668_1363  multidrug resistance protein MdtB  28.7 
 
 
1036 aa  40.8  0.008  Burkholderia pseudomallei 668  Bacteria  normal  0.387551  n/a   
 
 
-
 
NC_009076  BURPS1106A_1368  multidrug resistance protein MdtB  28.7 
 
 
1036 aa  40.8  0.008  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1500  AcrB/AcrD/AcrF family protein  28.7 
 
 
1036 aa  40.8  0.009  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2867  AcrB/AcrD/AcrF family protein  28.7 
 
 
1036 aa  40.8  0.009  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4762  hypothetical protein  30.53 
 
 
190 aa  40.8  0.009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal  0.390829 
 
 
-
 
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