More than 300 homologs were found in PanDaTox collection
for query gene Nmul_A0840 on replicon NC_007614
Organism: Nitrosospira multiformis ATCC 25196



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007614  Nmul_A0840  cold-shock DNA-binding domain-containing protein  100 
 
 
69 aa  140  5e-33  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0431891  n/a   
 
 
-
 
NC_010623  Bphy_4995  cold-shock DNA-binding domain-containing protein  73.85 
 
 
67 aa  105  3e-22  Burkholderia phymatum STM815  Bacteria  normal  0.833631  normal 
 
 
-
 
NC_010681  Bphyt_3078  cold-shock DNA-binding domain protein  75.38 
 
 
67 aa  104  4e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0913  cold-shock DNA-binding protein family protein  73.85 
 
 
67 aa  103  1e-21  Burkholderia xenovorans LB400  Bacteria  normal  0.587921  normal 
 
 
-
 
NC_010622  Bphy_0676  cold-shock DNA-binding domain-containing protein  72.31 
 
 
67 aa  102  2e-21  Burkholderia phymatum STM815  Bacteria  normal  0.197262  normal  0.753603 
 
 
-
 
NC_007298  Daro_1388  cold-shock DNA-binding protein family protein  73.44 
 
 
67 aa  102  2e-21  Dechloromonas aromatica RCB  Bacteria  decreased coverage  0.0000000000000202704  normal  0.239262 
 
 
-
 
NC_008543  Bcen2424_5764  cold-shock DNA-binding domain-containing protein  66.67 
 
 
170 aa  102  2e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  hitchhiker  0.008002 
 
 
-
 
NC_011662  Tmz1t_1374  cold-shock DNA-binding domain protein  76.19 
 
 
67 aa  102  2e-21  Thauera sp. MZ1T  Bacteria  normal  0.287556  n/a   
 
 
-
 
NC_007947  Mfla_1188  cold-shock DNA-binding protein family protein  74.24 
 
 
68 aa  102  2e-21  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00084266  normal 
 
 
-
 
NC_010622  Bphy_2727  cold-shock DNA-binding domain-containing protein  73.85 
 
 
67 aa  102  2e-21  Burkholderia phymatum STM815  Bacteria  normal  0.312449  normal 
 
 
-
 
NC_008542  Bcen2424_2520  cold-shock DNA-binding domain-containing protein  76.19 
 
 
67 aa  101  3e-21  Burkholderia cenocepacia HI2424  Bacteria  unclonable  0.000000000000151269  n/a   
 
 
-
 
NC_007298  Daro_3392  cold-shock DNA-binding protein family protein  73.44 
 
 
68 aa  102  3e-21  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5852  cold-shock DNA-binding protein family protein  76.19 
 
 
67 aa  101  3e-21  Burkholderia sp. 383  Bacteria  decreased coverage  0.0000000000587256  normal  0.480668 
 
 
 
NC_008060  Bcen_1909  cold-shock DNA-binding domain-containing protein  76.19 
 
 
67 aa  101  3e-21  Burkholderia cenocepacia AU 1054  Bacteria  hitchhiker  0.0000000083542  n/a   
 
 
-
 
NC_010508  Bcenmc03_2545  cold-shock DNA-binding domain-containing protein  76.19 
 
 
67 aa  101  3e-21  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000000242015  decreased coverage  0.000000000715587 
 
 
-
 
NC_007951  Bxe_A0430  cold-shock DNA-binding protein family protein  73.85 
 
 
67 aa  100  6e-21  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0000180464  normal 
 
 
-
 
NC_010681  Bphyt_3528  cold-shock DNA-binding domain protein  73.85 
 
 
67 aa  100  6e-21  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.00720053  normal  0.332876 
 
 
-
 
NC_011662  Tmz1t_1681  cold-shock DNA-binding domain protein  69.12 
 
 
69 aa  100  7e-21  Thauera sp. MZ1T  Bacteria  normal  0.248337  n/a   
 
 
-
 
NC_007434  BURPS1710b_1112  cold shock transcription regulator protein  74.6 
 
 
81 aa  100  9e-21  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00000000170415  n/a   
 
 
-
 
NC_007651  BTH_I0761  cold-shock domain-contain protein  74.6 
 
 
81 aa  100  9e-21  Burkholderia thailandensis E264  Bacteria  unclonable  0.00000000000025188  n/a   
 
 
-
 
NC_008061  Bcen_5095  cold-shock DNA-binding domain-containing protein  69.7 
 
 
67 aa  100  9e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2156  cold-shock domain-contain protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.00000351487  n/a   
 
 
-
 
NC_006348  BMA2279  cold-shock domain-contain protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia mallei ATCC 23344  Bacteria  decreased coverage  0.000000000750079  n/a   
 
 
-
 
NC_010551  BamMC406_2438  cold-shock DNA-binding domain-containing protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia ambifaria MC40-6  Bacteria  unclonable  0.00000000000180609  unclonable  0.0000000000176576 
 
 
-
 
NC_007348  Reut_B5340  cold-shock DNA-binding protein family protein  72.31 
 
 
83 aa  99.8  1e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0962  cold shock protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.000153995  n/a   
 
 
-
 
NC_008836  BMA10229_A1051  cold-shock domain-contain protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.000000000117316  n/a   
 
 
-
 
NC_010515  Bcenmc03_4409  cold-shock DNA-binding domain-containing protein  69.7 
 
 
67 aa  99.4  1e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0775  cold-shock DNA-binding domain-containing protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia multivorans ATCC 17616  Bacteria  decreased coverage  0.0000000000150831  hitchhiker  0.000000000149768 
 
 
-
 
NC_009074  BURPS668_0958  cold shock protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia pseudomallei 668  Bacteria  unclonable  0.000000000000117939  n/a   
 
 
-
 
NC_008390  Bamb_2568  cold-shock DNA-binding domain-containing protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia ambifaria AMMD  Bacteria  hitchhiker  0.000000063088  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0574  cold-shock domain-contain protein  74.6 
 
 
67 aa  99.8  1e-20  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000000000000358394  n/a   
 
 
-
 
NC_010681  Bphyt_3167  cold-shock DNA-binding domain protein  74.6 
 
 
68 aa  98.6  2e-20  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000000493488  hitchhiker  0.00220171 
 
 
-
 
NC_009074  BURPS668_2941  cold-shock domain-contain protein  73.44 
 
 
67 aa  99  2e-20  Burkholderia pseudomallei 668  Bacteria  unclonable  0.000000000000529081  n/a   
 
 
-
 
NC_007404  Tbd_0679  cold-shock DNA-binding protein family protein  71.88 
 
 
68 aa  99  2e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.233328  normal  0.774201 
 
 
-
 
NC_007434  BURPS1710b_3041  cold shock transcription regulator protein  73.44 
 
 
67 aa  99  2e-20  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000233724  n/a   
 
 
-
 
NC_009076  BURPS1106A_3007  cold-shock domain-contain protein  73.44 
 
 
67 aa  99  2e-20  Burkholderia pseudomallei 1106a  Bacteria  unclonable  0.0000126299  n/a   
 
 
-
 
NC_007651  BTH_I1594  cold-shock domain-contain protein  73.44 
 
 
67 aa  99  2e-20  Burkholderia thailandensis E264  Bacteria  unclonable  0.000000000000225603  n/a   
 
 
-
 
NC_007951  Bxe_A0798  cold-shock DNA-binding protein family protein  74.6 
 
 
68 aa  98.6  2e-20  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.0000000000000106482  normal 
 
 
-
 
NC_007952  Bxe_B2780  cold-shock DNA-binding protein family protein  69.23 
 
 
67 aa  98.6  2e-20  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00000626517  normal 
 
 
-
 
NC_008544  Bcen2424_5888  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  98.2  3e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  0.232235  normal  0.225892 
 
 
-
 
NC_010676  Bphyt_6907  cold-shock DNA-binding domain protein  70.31 
 
 
67 aa  98.2  3e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.240211  normal  0.394944 
 
 
-
 
NC_010676  Bphyt_6765  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  98.6  3e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.929729  normal  0.307986 
 
 
-
 
NC_007511  Bcep18194_B1151  cold-shock DNA-binding protein family protein  69.23 
 
 
67 aa  98.2  3e-20  Burkholderia sp. 383  Bacteria  normal  0.0114699  normal  0.306384 
 
 
-
 
NC_010552  BamMC406_4522  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  98.2  3e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  0.044588  normal  0.193224 
 
 
-
 
NC_010627  Bphy_7382  cold-shock DNA-binding domain-containing protein  71.88 
 
 
67 aa  98.6  3e-20  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0708981 
 
 
-
 
NC_010512  Bcenmc03_6397  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  98.2  3e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.257839 
 
 
-
 
NC_007952  Bxe_B2951  cold-shock DNA-binding protein family protein  66.18 
 
 
77 aa  98.6  3e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.15288  normal 
 
 
-
 
NC_007974  Rmet_5816  major cold shock protein  69.23 
 
 
67 aa  98.2  3e-20  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_5524  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  98.2  3e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.337597  n/a   
 
 
-
 
NC_008391  Bamb_4064  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  98.2  3e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.325578  normal  0.535982 
 
 
-
 
NC_008542  Bcen2424_1005  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  4e-20  Burkholderia cenocepacia HI2424  Bacteria  decreased coverage  0.000000000138361  n/a   
 
 
-
 
NC_007404  Tbd_0855  cold-shock DNA-binding protein family protein  70.77 
 
 
68 aa  98.2  4e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.563444  normal  0.445485 
 
 
-
 
NC_007510  Bcep18194_A4113  cold-shock DNA-binding protein family protein  73.44 
 
 
67 aa  97.8  4e-20  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000000000103179  normal  0.421912 
 
 
-
 
NC_010084  Bmul_2894  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  4e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0694911  normal  0.905374 
 
 
-
 
NC_008060  Bcen_0527  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  4e-20  Burkholderia cenocepacia AU 1054  Bacteria  unclonable  0.0000000000967156  n/a   
 
 
-
 
NC_010508  Bcenmc03_0965  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  4e-20  Burkholderia cenocepacia MC0-3  Bacteria  unclonable  0.00000000000119944  normal  0.392298 
 
 
-
 
NC_010084  Bmul_2393  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  4e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0273  cold-shock DNA-binding domain protein  68.25 
 
 
67 aa  97.4  5e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0262  cold-shock DNA-binding domain protein  68.25 
 
 
67 aa  97.4  5e-20  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5342  cold-shock DNA-binding protein family protein  71.88 
 
 
67 aa  97.4  5e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3591  cold-shock DNA-binding protein family protein  73.44 
 
 
67 aa  97.8  5e-20  Burkholderia sp. 383  Bacteria  normal  normal  0.724551 
 
 
-
 
NC_007760  Adeh_0252  cold-shock DNA-binding protein family protein  68.25 
 
 
67 aa  97.4  5e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.994476  n/a   
 
 
-
 
NC_010551  BamMC406_0434  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  5e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  0.157399  normal  0.399503 
 
 
-
 
NC_008542  Bcen2424_0503  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  5e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0476  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  5e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.528893 
 
 
-
 
NC_010557  BamMC406_5581  cold-shock DNA-binding domain-containing protein  69.23 
 
 
67 aa  97.4  5e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5818  cold-shock DNA-binding protein family  71.88 
 
 
67 aa  97.4  5e-20  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2602  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  5e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0673828  n/a   
 
 
-
 
NC_008390  Bamb_0408  cold-shock DNA-binding domain-containing protein  73.44 
 
 
67 aa  97.8  5e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.125835  n/a   
 
 
-
 
NC_003296  RSp1053  cold shock-like transcription regulator protein  71.43 
 
 
67 aa  97.4  6e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.470883  normal 
 
 
-
 
NC_010622  Bphy_0567  cold-shock DNA-binding domain-containing protein  73.02 
 
 
68 aa  97.4  6e-20  Burkholderia phymatum STM815  Bacteria  unclonable  0.0000000000101913  hitchhiker  0.000143899 
 
 
-
 
NC_007951  Bxe_A2596  cold-shock DNA-binding protein family protein  66.67 
 
 
67 aa  97.4  6e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.111063  normal 
 
 
-
 
NC_010623  Bphy_5169  cold-shock DNA-binding domain-containing protein  70.31 
 
 
67 aa  97.1  7e-20  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4464  cold-shock DNA-binding domain-containing protein  69.7 
 
 
67 aa  97.1  7e-20  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1449  cold-shock DNA-binding protein family protein  69.7 
 
 
67 aa  97.1  7e-20  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5838  cold-shock DNA-binding domain-containing protein  69.7 
 
 
67 aa  97.1  7e-20  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.284132  normal 
 
 
-
 
NC_009675  Anae109_0273  cold-shock DNA-binding domain-containing protein  68.25 
 
 
67 aa  97.1  7e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.355642 
 
 
-
 
NC_008061  Bcen_3904  cold-shock DNA-binding domain-containing protein  69.7 
 
 
67 aa  97.1  7e-20  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2140  cold-shock DNA-binding protein family protein  71.43 
 
 
67 aa  97.1  8e-20  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.000000000648799  normal 
 
 
-
 
NC_010552  BamMC406_4361  cold-shock DNA-binding domain-containing protein  68.18 
 
 
67 aa  96.7  9e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3900  cold-shock DNA-binding domain-containing protein  68.18 
 
 
67 aa  96.7  9e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.878106  normal 
 
 
-
 
NC_012857  Rpic12D_4386  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  96.7  1e-19  Ralstonia pickettii 12D  Bacteria  normal  normal  0.490734 
 
 
-
 
NC_010551  BamMC406_0877  cold-shock DNA-binding domain-containing protein  71.88 
 
 
67 aa  96.3  1e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.351907  normal 
 
 
-
 
NC_010678  Rpic_4276  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  96.7  1e-19  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0865  cold-shock DNA-binding domain-containing protein  71.88 
 
 
67 aa  96.3  1e-19  Burkholderia ambifaria AMMD  Bacteria  hitchhiker  0.0000000217633  n/a   
 
 
-
 
NC_008392  Bamb_5798  cold-shock DNA-binding domain-containing protein  67.69 
 
 
67 aa  96.7  1e-19  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.992183 
 
 
-
 
NC_009074  BURPS668_3598  CspE-related protein  70.31 
 
 
67 aa  95.5  2e-19  Burkholderia pseudomallei 668  Bacteria  normal  0.164204  n/a   
 
 
-
 
NC_010524  Lcho_1093  cold-shock DNA-binding domain-containing protein  70.15 
 
 
72 aa  95.9  2e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_006348  BMA2791  cold-shock domain-contain protein  70.31 
 
 
67 aa  95.5  2e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  0.827238  n/a   
 
 
-
 
NC_012857  Rpic12D_3895  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  95.9  2e-19  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_3609  cold shock transcription regulator protein  70.31 
 
 
67 aa  95.5  2e-19  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3184  cold-shock domain-contain protein  70.31 
 
 
67 aa  95.5  2e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3622  cold-shock domain-contain protein  70.31 
 
 
67 aa  95.5  2e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_3782  cold-shock DNA-binding domain protein  69.23 
 
 
67 aa  95.9  2e-19  Ralstonia pickettii 12J  Bacteria  normal  0.0399631  normal  0.208523 
 
 
-
 
NC_007651  BTH_I2936  cold-shock domain-contain protein  70.31 
 
 
67 aa  95.5  2e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1668  cold-shock DNA-binding protein family protein  68.75 
 
 
67 aa  95.9  2e-19  Chromohalobacter salexigens DSM 3043  Bacteria  decreased coverage  0.0000281076  n/a   
 
 
-
 
NC_008836  BMA10229_A1750  cold-shock domain-contain protein  70.31 
 
 
67 aa  95.5  2e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0167  cold-shock domain-contain protein  66.15 
 
 
67 aa  94.7  3e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0482  cold-shock domain-contain protein  66.15 
 
 
67 aa  94.7  3e-19  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>