7 homologs were found in PanDaTox collection
for query gene Nmar_R0031 on replicon NC_010085
Organism: Nitrosopumilus maritimus SCM1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010085  Nmar_R0031  tRNA-Thr  100 
 
 
75 bp  149  1.0000000000000001e-34  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_014148  Plim_R0044  tRNA-Pro  100 
 
 
78 bp  48.1  0.0003  Planctomyces limnophilus DSM 3776  Bacteria  hitchhiker  0.000299303  n/a   
 
 
-
 
NC_004116  tRNA-Arg-2  tRNA-Arg  90.7 
 
 
74 bp  46.1  0.001  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0124116  n/a   
 
 
-
 
NC_008527  LACR_t0490  tRNA-Arg  90.7 
 
 
74 bp  46.1  0.001  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_t1999  tRNA-Arg  90.7 
 
 
74 bp  46.1  0.001  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_R0017  tRNA-Thr  96.3 
 
 
76 bp  46.1  0.001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_R0013  tRNA-Thr  89.47 
 
 
75 bp  44.1  0.004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
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