4 homologs were found in PanDaTox collection
for query gene Nham_R0026 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_R0026    100 
 
 
89 bp  176  6e-43  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_miscRNA6  gcvT  100 
 
 
91 bp  87.7  4e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0692861 
 
 
-
 
NC_007925  RPC_R0050    97.67 
 
 
93 bp  77.8  0.0000000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  decreased coverage  0.000329156 
 
 
-
 
NC_007958  RPD_R0028    95.65 
 
 
89 bp  75.8  0.000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
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