4 homologs were found in PanDaTox collection
for query gene Nham_4042 on replicon NC_007959
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007959  Nham_4042    100 
 
 
579 bp  1148    Nitrobacter hamburgensis X14  Bacteria  normal  0.617841  n/a   
 
 
-
 
NC_010511  M446_0615  XRE family transcriptional regulator  93.94 
 
 
258 bp  50.1  0.0007  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0174631 
 
 
-
 
NC_011666  Msil_3883  transcriptional regulator, XRE family  93.94 
 
 
285 bp  50.1  0.0007  Methylocella silvestris BL2  Bacteria  n/a    normal  0.105011 
 
 
-
 
NC_011894  Mnod_1557  transcriptional regulator, XRE family  93.94 
 
 
273 bp  50.1  0.0007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.684199  n/a   
 
 
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