9 homologs were found in PanDaTox collection
for query gene Nham_3862 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_3862  hypothetical protein  100 
 
 
88 aa  178  2e-44  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010518  Mrad2831_6458  hypothetical protein  46.32 
 
 
100 aa  75.9  0.0000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal  0.785876 
 
 
-
 
NC_011892  Mnod_8426  hypothetical protein  51.06 
 
 
70 aa  49.7  0.00001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.237227  n/a   
 
 
-
 
NC_008762  Pnap_4979  hypothetical protein  52.5 
 
 
77 aa  46.2  0.0002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  n/a   
 
 
-
 
NC_013224  Dret_2501  hypothetical protein  52.5 
 
 
75 aa  44.7  0.0005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013224  Dret_2511  hypothetical protein  52.63 
 
 
75 aa  42  0.003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.526212 
 
 
-
 
NC_008254  Meso_0521  hypothetical protein  35.53 
 
 
79 aa  41.2  0.005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0708  hypothetical protein  51.22 
 
 
82 aa  40.8  0.006  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3819  hypothetical protein  34.12 
 
 
84 aa  40.8  0.006  Caulobacter sp. K31  Bacteria  normal  0.481928  normal 
 
 
-
 
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