7 homologs were found in PanDaTox collection
for query gene Nham_3775 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_3775  hypothetical protein  100 
 
 
117 aa  237  2.9999999999999997e-62  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1301  XRE family transcriptional regulator  35.37 
 
 
85 aa  45.8  0.0002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.756983 
 
 
-
 
NC_009621  Smed_5405  XRE family transcriptional regulator  35.37 
 
 
86 aa  43.5  0.0009  Sinorhizobium medicae WSM419  Bacteria  normal  0.784504  normal  0.232793 
 
 
-
 
NC_007958  RPD_3920  XRE family transcriptional regulator  31.71 
 
 
92 aa  42.7  0.002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1807  XRE family transcriptional regulator  32.91 
 
 
94 aa  41.6  0.003  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4118  XRE family transcriptional regulator  32.5 
 
 
117 aa  41.2  0.004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.292967  normal 
 
 
-
 
NC_011666  Msil_3883  transcriptional regulator, XRE family  32.14 
 
 
94 aa  40.4  0.009  Methylocella silvestris BL2  Bacteria  n/a    normal  0.105011 
 
 
-
 
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