13 homologs were found in PanDaTox collection
for query gene Nham_0368 on replicon NC_007964
Organism: Nitrobacter hamburgensis X14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007964  Nham_0368  hypothetical protein  100 
 
 
125 aa  257  4e-68  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2848  hypothetical protein  93.41 
 
 
126 aa  177  4e-44  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2481  hypothetical protein  46.27 
 
 
255 aa  60.5  0.000000007  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0996832 
 
 
-
 
NC_010511  M446_6402  anti-repressor protein  51.67 
 
 
88 aa  57  0.00000009  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009707  JJD26997_0306  DNA-binding protein Roi  47.62 
 
 
247 aa  53.5  0.000001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.000000394975  n/a   
 
 
-
 
NC_009707  JJD26997_1112  DNA-binding protein Roi  47.62 
 
 
247 aa  53.5  0.000001  Campylobacter jejuni subsp. doylei 269.97  Bacteria  hitchhiker  0.000052914  n/a   
 
 
-
 
NC_013421  Pecwa_0869  Phage regulatory protein, Rha-like protein  40.58 
 
 
231 aa  49.3  0.00002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1435  DNA-binding protein Roi  42.86 
 
 
243 aa  48.1  0.00003  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_3395  phage-encoded protein  64.52 
 
 
249 aa  45.8  0.0002  Pseudomonas putida F1  Bacteria  hitchhiker  0.00000514274  normal 
 
 
-
 
NC_009487  SaurJH9_1027  Rha family phage regulatory protein  28.38 
 
 
258 aa  42  0.003  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.000867167  n/a   
 
 
-
 
NC_009632  SaurJH1_1046  Rha family phage regulatory protein  28.38 
 
 
258 aa  42  0.003  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.00498472  n/a   
 
 
-
 
NC_008752  Aave_1690  uncharacterized phage-encoded protein  47.83 
 
 
236 aa  41.2  0.005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0637795 
 
 
-
 
NC_008751  Dvul_1059  antirepressor, putative  31.91 
 
 
227 aa  40.4  0.009  Desulfovibrio vulgaris DP4  Bacteria  normal  0.0737012  normal 
 
 
-
 
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