26 homologs were found in PanDaTox collection
for query gene Ndas_5207 on replicon NC_014211
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014211  Ndas_5207  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
323 aa  640    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.441203 
 
 
-
 
NC_013757  Gobs_2284  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.18 
 
 
323 aa  119  4.9999999999999996e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0993778  n/a   
 
 
-
 
NC_013510  Tcur_3862  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.25 
 
 
316 aa  117  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2553  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.78 
 
 
324 aa  108  2e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8734  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.12 
 
 
311 aa  99.8  5e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_12220  anti-sigma regulatory factor (Ser/Thr protein kinase)  28.29 
 
 
310 aa  95.1  1e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6671  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.56 
 
 
357 aa  93.2  6e-18  Frankia sp. EAN1pec  Bacteria  normal  0.314942  normal 
 
 
-
 
NC_007777  Francci3_0218  putative serine/threonine kinase anti-sigma factor  27.97 
 
 
331 aa  88.6  1e-16  Frankia sp. CcI3  Bacteria  normal  0.614577  normal  0.286809 
 
 
-
 
NC_013595  Sros_0810  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.33 
 
 
317 aa  86.3  6e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.391308  normal 
 
 
-
 
NC_013131  Caci_7185  putative signal transduction histidine kinase  30.84 
 
 
323 aa  85.5  0.000000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2432  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.14 
 
 
312 aa  79.7  0.00000000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0642435  n/a   
 
 
-
 
NC_009953  Sare_4105  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
151 aa  79  0.0000000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0408449 
 
 
-
 
NC_013757  Gobs_0117  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.17 
 
 
331 aa  70.1  0.00000000005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.2493  n/a   
 
 
-
 
NC_013595  Sros_0066  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.46 
 
 
132 aa  69.7  0.00000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3102  hypothetical protein  26.86 
 
 
345 aa  69.7  0.00000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.142812  normal 
 
 
-
 
NC_009380  Strop_3724  ATPase domain-containing protein  31.58 
 
 
163 aa  68.9  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1390  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.64 
 
 
468 aa  67  0.0000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  0.057266  n/a   
 
 
-
 
NC_013235  Namu_2189  hypothetical protein  25.57 
 
 
323 aa  60.8  0.00000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0960654  hitchhiker  0.00117014 
 
 
-
 
NC_009972  Haur_0731  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.9 
 
 
139 aa  52.8  0.000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.993652  n/a   
 
 
-
 
NC_011831  Cagg_3034  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.52 
 
 
155 aa  52.4  0.00001  Chloroflexus aggregans DSM 9485  Bacteria  normal  decreased coverage  0.00000275353 
 
 
-
 
NC_014165  Tbis_1514  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.98 
 
 
127 aa  48.1  0.0002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0502369  normal 
 
 
-
 
NC_009523  RoseRS_0030  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.23 
 
 
144 aa  47.4  0.0004  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.786698 
 
 
-
 
NC_009972  Haur_1624  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.63 
 
 
154 aa  46.2  0.0007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4212  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.64 
 
 
144 aa  45.4  0.001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.797188  normal  0.229717 
 
 
-
 
NC_013595  Sros_3107  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.76 
 
 
151 aa  44.3  0.003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.111934  normal 
 
 
-
 
NC_013739  Cwoe_4563  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.53 
 
 
286 aa  44.3  0.003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>