147 homologs were found in PanDaTox collection
for query gene Ndas_4319 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_4319  transcriptional regulator, CarD family  100 
 
 
160 aa  318  9.999999999999999e-87  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2907  CarD family transcriptional regulator  94.3 
 
 
160 aa  300  7.000000000000001e-81  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0703  transcriptional regulator, CarD family  92.41 
 
 
160 aa  294  4e-79  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0540347  n/a   
 
 
-
 
NC_013595  Sros_0963  CarD family transcriptional regulator  90 
 
 
160 aa  290  6e-78  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0501  CarD family transcriptional regulator  87.5 
 
 
163 aa  284  2.9999999999999996e-76  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0364  transcriptional regulator, CarD family  88.75 
 
 
162 aa  281  2.0000000000000002e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  0.376987  n/a   
 
 
-
 
NC_013757  Gobs_0651  transcriptional regulator, CarD family  86.88 
 
 
160 aa  278  2e-74  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.058243  n/a   
 
 
-
 
NC_009565  TBFG_13616  transcription factor  86.71 
 
 
162 aa  276  9e-74  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.392977 
 
 
-
 
NC_007777  Francci3_4255  CarD family transcriptional regulator  86.08 
 
 
160 aa  275  2e-73  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5340  CarD family transcriptional regulator  86.71 
 
 
162 aa  275  2e-73  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0362  CarD family transcriptional regulator  86.08 
 
 
160 aa  275  2e-73  Frankia sp. EAN1pec  Bacteria  normal  0.0755625  hitchhiker  0.00187432 
 
 
-
 
NC_009338  Mflv_1444  CarD family transcriptional regulator  86.71 
 
 
162 aa  275  3e-73  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.250117 
 
 
-
 
NC_013159  Svir_35090  transcriptional regulator, CarD family  85.62 
 
 
163 aa  273  8e-73  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.86286 
 
 
-
 
NC_008146  Mmcs_4740  CarD family transcriptional regulator  85.44 
 
 
162 aa  270  5.000000000000001e-72  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4826  CarD family transcriptional regulator  85.44 
 
 
162 aa  270  5.000000000000001e-72  Mycobacterium sp. KMS  Bacteria  normal  0.652741  normal  0.999363 
 
 
-
 
NC_009077  Mjls_5126  CarD family transcriptional regulator  85.44 
 
 
162 aa  270  5.000000000000001e-72  Mycobacterium sp. JLS  Bacteria  normal  normal  0.593452 
 
 
-
 
NC_009664  Krad_0898  transcriptional regulator, CarD family  81.25 
 
 
160 aa  264  4e-70  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00538334 
 
 
-
 
NC_014158  Tpau_0601  transcriptional regulator, CarD family  82.91 
 
 
162 aa  264  5e-70  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.251005  n/a   
 
 
-
 
NC_013235  Namu_0866  transcriptional regulator, CarD family  81.25 
 
 
160 aa  262  1e-69  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.795809 
 
 
-
 
NC_009380  Strop_4262  transcription factor CarD  81.13 
 
 
161 aa  256  6e-68  Salinispora tropica CNB-440  Bacteria  normal  normal  0.102192 
 
 
-
 
NC_009953  Sare_4692  CarD family transcriptional regulator  81.13 
 
 
161 aa  256  6e-68  Salinispora arenicola CNS-205  Bacteria  normal  0.372756  normal 
 
 
-
 
NC_008578  Acel_0078  CarD family transcriptional regulator  85.62 
 
 
160 aa  254  2e-67  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.805764 
 
 
-
 
NC_012669  Bcav_0773  transcriptional regulator, CarD family  78.75 
 
 
160 aa  254  4e-67  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.164526  normal  0.216229 
 
 
-
 
NC_013521  Sked_31820  transcriptional regulator, CarD family  78.12 
 
 
160 aa  253  7e-67  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09270  transcriptional regulator, CarD family  77.5 
 
 
160 aa  251  2.0000000000000002e-66  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2077  transcriptional regulator, CarD family  77.5 
 
 
161 aa  251  2.0000000000000002e-66  Jonesia denitrificans DSM 20603  Bacteria  normal  0.90671  normal 
 
 
-
 
NC_013530  Xcel_2959  transcriptional regulator, CarD family  77.5 
 
 
160 aa  250  6e-66  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0726  CarD family transcriptional regulator  76.25 
 
 
160 aa  249  2e-65  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4040  CarD family transcriptional regulator  80.12 
 
 
161 aa  248  2e-65  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0852  transcriptional regulator, CarD family  76.25 
 
 
160 aa  249  2e-65  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013947  Snas_0142  transcriptional regulator, CarD family  77.85 
 
 
161 aa  246  7e-65  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.432895  normal  0.208842 
 
 
-
 
NC_012803  Mlut_03770  transcriptional regulator, CarD family  75.32 
 
 
160 aa  241  1.9999999999999999e-63  Micrococcus luteus NCTC 2665  Bacteria  normal  0.0832449  n/a   
 
 
-
 
NC_013169  Ksed_03720  transcriptional regulator, CarD family  74.38 
 
 
160 aa  239  9e-63  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.178862 
 
 
-
 
NC_013441  Gbro_0970  transcription factor CarD  71.52 
 
 
162 aa  238  2e-62  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0421613  n/a   
 
 
-
 
NC_014151  Cfla_0663  transcriptional regulator, CarD family  79.38 
 
 
160 aa  236  8e-62  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.471723  hitchhiker  0.000789071 
 
 
-
 
NC_013131  Caci_8145  transcriptional regulator, CarD family  80 
 
 
160 aa  233  7e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0184  CarD family transcriptional regulator  56.41 
 
 
158 aa  186  1e-46  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.0000461905  n/a   
 
 
-
 
NC_013721  HMPREF0424_0598  CarD-like protein  60.51 
 
 
198 aa  181  4.0000000000000006e-45  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.80876 
 
 
-
 
NC_010816  BLD_0751  transcriptional_regulator  60.51 
 
 
197 aa  180  8.000000000000001e-45  Bifidobacterium longum DJO10A  Bacteria  normal  0.024387  n/a   
 
 
-
 
NC_009253  Dred_0185  CarD family transcriptional regulator  53.21 
 
 
158 aa  173  9.999999999999999e-43  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0164199  n/a   
 
 
-
 
NC_013216  Dtox_0259  transcriptional regulator, CarD family  51.28 
 
 
158 aa  167  4e-41  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000116082  normal  0.0229238 
 
 
-
 
NC_011899  Hore_00900  transcriptional regulator, CarD family  48.72 
 
 
176 aa  167  7e-41  Halothermothrix orenii H 168  Bacteria  decreased coverage  8.92061e-17  n/a   
 
 
-
 
NC_013124  Afer_1901  transcriptional regulator, CarD family  53.46 
 
 
159 aa  159  2e-38  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.488949  n/a   
 
 
-
 
NC_007644  Moth_2489  CarD family transcriptional regulator  46.5 
 
 
158 aa  157  6e-38  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00883814  normal  0.0681247 
 
 
-
 
NC_011898  Ccel_0340  transcriptional regulator, CarD family  46.15 
 
 
159 aa  157  8e-38  Clostridium cellulolyticum H10  Bacteria  normal  0.18012  n/a   
 
 
-
 
NC_010718  Nther_0164  transcriptional regulator, CarD family  44.94 
 
 
161 aa  152  2e-36  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.475576  normal 
 
 
-
 
NC_009012  Cthe_2940  CarD family transcriptional regulator  43.31 
 
 
158 aa  152  2.9999999999999998e-36  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0399  transcriptional regulator, CarD family  53.25 
 
 
159 aa  150  8e-36  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00433509  n/a   
 
 
-
 
NC_013739  Cwoe_1687  transcriptional regulator, CarD family  46.84 
 
 
171 aa  142  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.613225  normal  0.385121 
 
 
-
 
NC_011830  Dhaf_0392  transcriptional regulator, CarD family  46.94 
 
 
158 aa  142  2e-33  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000000362697  n/a   
 
 
-
 
NC_013171  Apre_0173  transcriptional regulator, CarD family  38.31 
 
 
159 aa  131  3.9999999999999996e-30  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3388  CarD family transcriptional regulator  41.4 
 
 
159 aa  130  9e-30  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4857  CarD family transcriptional regulator  38.85 
 
 
164 aa  129  2.0000000000000002e-29  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A4851  transcriptional regulator, CarD family  38.85 
 
 
164 aa  129  2.0000000000000002e-29  Bacillus cereus AH187  Bacteria  normal  0.906261  n/a   
 
 
-
 
NC_005957  BT9727_4447  CarD family transcriptional regulator  38.85 
 
 
164 aa  128  3e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.948938  n/a   
 
 
-
 
NC_011773  BCAH820_4833  transcriptional regulator, CarD family  38.85 
 
 
164 aa  128  3e-29  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK4465  CarD family transcriptional regulator  38.85 
 
 
164 aa  128  4.0000000000000003e-29  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3655  CarD family transcriptional regulator  34.39 
 
 
159 aa  119  1.9999999999999998e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  unclonable  0.000000563805  normal 
 
 
-
 
NC_010184  BcerKBAB4_3335  CarD family transcriptional regulator  36.42 
 
 
158 aa  119  1.9999999999999998e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.512684  n/a   
 
 
-
 
NC_011725  BCB4264_A4827  transcriptional regulator, CarD family  39.49 
 
 
164 aa  118  3e-26  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4546  CarD family transcriptional regulator  39.49 
 
 
159 aa  118  3.9999999999999996e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0409  transcriptional regulator, CarD family  39.49 
 
 
164 aa  118  3.9999999999999996e-26  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2498  CarD family transcriptional regulator  33.96 
 
 
171 aa  115  1.9999999999999998e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.860997  hitchhiker  0.00028149 
 
 
-
 
NC_005945  BAS4611  CarD family transcriptional regulator  40.3 
 
 
153 aa  114  5e-25  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4967  CarD family transcriptional regulator  40.3 
 
 
148 aa  114  5e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0352786  n/a   
 
 
-
 
NC_003909  BCE_3676  CarD family transcriptional regulator  35.76 
 
 
158 aa  114  6.9999999999999995e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1560  transcriptional regulator, CarD family  34.87 
 
 
158 aa  113  8.999999999999998e-25  Bacillus cereus G9842  Bacteria  normal  0.879343  normal  0.22005 
 
 
-
 
NC_007760  Adeh_1271  CarD family transcriptional regulator  33.33 
 
 
171 aa  113  1.0000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0355661  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1065  CarD family transcriptional regulator  33.77 
 
 
153 aa  113  1.0000000000000001e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0695746  n/a   
 
 
-
 
NC_011145  AnaeK_2592  transcriptional regulator, CarD family  33.33 
 
 
171 aa  113  1.0000000000000001e-24  Anaeromyxobacter sp. K  Bacteria  normal  0.0112448  n/a   
 
 
-
 
NC_011891  A2cp1_2685  transcriptional regulator, CarD family  33.33 
 
 
171 aa  113  1.0000000000000001e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.000114953  n/a   
 
 
-
 
NC_011725  BCB4264_A3756  transcriptional regulator, CarD family  35.1 
 
 
158 aa  113  1.0000000000000001e-24  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3438  CarD family transcriptional regulator  34.21 
 
 
158 aa  112  2.0000000000000002e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.270269  n/a   
 
 
-
 
NC_006274  BCZK3350  CarD family transcriptional regulator  34.21 
 
 
158 aa  112  2.0000000000000002e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3708  CarD family transcriptional regulator  34.21 
 
 
158 aa  112  2.0000000000000002e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.672649  n/a   
 
 
-
 
NC_011773  BCAH820_3658  transcriptional regulator, CarD family  34.21 
 
 
158 aa  112  2.0000000000000002e-24  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_3401  CarD family transcriptional regulator  33.55 
 
 
158 aa  110  9e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0104  putative transcriptional regulator  38.75 
 
 
161 aa  110  9e-24  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3681  transcriptional regulator, CarD family  33.55 
 
 
158 aa  110  9e-24  Bacillus cereus AH187  Bacteria  normal  0.0786327  n/a   
 
 
-
 
NC_013440  Hoch_4522  transcriptional regulator, CarD family  37.34 
 
 
162 aa  109  1.0000000000000001e-23  Haliangium ochraceum DSM 14365  Bacteria  normal  0.76792  normal 
 
 
-
 
NC_012034  Athe_1245  transcriptional regulator, CarD family  36.25 
 
 
168 aa  109  2.0000000000000002e-23  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.0000000622315  n/a   
 
 
-
 
NC_006274  BCZK2880  CarD family transcriptional regulator  32.45 
 
 
158 aa  108  3e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2821  CarD family transcriptional regulator  33.78 
 
 
188 aa  108  3e-23  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000000911518  n/a   
 
 
-
 
NC_011772  BCG9842_B2164  transcriptional regulator, CarD family  33.55 
 
 
153 aa  108  4.0000000000000004e-23  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_3244  CarD family transcriptional regulator  36.31 
 
 
155 aa  105  2e-22  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2124  transcriptional regulator, CarD family  35.62 
 
 
161 aa  103  1e-21  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0696719  n/a   
 
 
-
 
NC_008048  Sala_0247  CarD family transcriptional regulator  36.71 
 
 
175 aa  101  4e-21  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.246568 
 
 
-
 
NC_008009  Acid345_0553  CarD family transcriptional regulator  37.34 
 
 
186 aa  100  7e-21  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.106892 
 
 
-
 
NC_007794  Saro_0124  CarD family transcriptional regulator  37.33 
 
 
174 aa  97.1  9e-20  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3537  CarD family transcriptional regulator  36.54 
 
 
172 aa  95.1  4e-19  Sphingomonas wittichii RW1  Bacteria  normal  0.92305  normal  0.183465 
 
 
-
 
NC_010172  Mext_3880  transcription factor CarD  36.54 
 
 
196 aa  94  7e-19  Methylobacterium extorquens PA1  Bacteria  normal  0.260556  normal  0.0799721 
 
 
-
 
NC_011757  Mchl_4190  transcriptional regulator, CarD family  36.54 
 
 
196 aa  94  8e-19  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.627659  normal  0.224383 
 
 
-
 
NC_008044  TM1040_0576  CarD family transcriptional regulator  33.12 
 
 
169 aa  93.6  1e-18  Ruegeria sp. TM1040  Bacteria  unclonable  0.0000000000504519  unclonable  0.0000000218406 
 
 
-
 
NC_010725  Mpop_4337  transcriptional regulator, CarD family  35.9 
 
 
198 aa  93.2  1e-18  Methylobacterium populi BJ001  Bacteria  normal  0.139184  normal  0.529688 
 
 
-
 
NC_013223  Dret_0842  transcriptional regulator, CarD family  33.33 
 
 
174 aa  92  3e-18  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.000000502927  normal  0.471539 
 
 
-
 
NC_007802  Jann_3308  CarD family transcriptional regulator  35.67 
 
 
172 aa  91.7  4e-18  Jannaschia sp. CCS1  Bacteria  decreased coverage  0.0000000178714  normal  0.0560372 
 
 
-
 
NC_011894  Mnod_1718  transcriptional regulator, CarD family  35.26 
 
 
197 aa  91.3  5e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0187  CarD family transcriptional regulator  33.54 
 
 
206 aa  90.9  6e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  0.160759  normal 
 
 
-
 
NC_010505  Mrad2831_3708  CarD family transcriptional regulator  35.26 
 
 
201 aa  90.9  7e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.378672 
 
 
-
 
NC_014150  Bmur_1516  transcriptional regulator, CarD family  30.13 
 
 
191 aa  90.5  8e-18  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
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