More than 300 homologs were found in PanDaTox collection
for query gene Ndas_2365 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_2365  extracellular solute-binding protein family 1  100 
 
 
416 aa  843    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.618021 
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  35.27 
 
 
406 aa  234  3e-60  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_013131  Caci_2170  extracellular solute-binding protein family 1  30.23 
 
 
428 aa  188  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  25.81 
 
 
411 aa  148  2.0000000000000003e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  24.75 
 
 
411 aa  145  2e-33  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  26.79 
 
 
410 aa  139  1e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  26.53 
 
 
410 aa  138  1e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  25.35 
 
 
410 aa  128  2.0000000000000002e-28  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  24.79 
 
 
366 aa  126  7e-28  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  25.24 
 
 
424 aa  107  5e-22  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  25.27 
 
 
401 aa  107  5e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  24.93 
 
 
410 aa  105  2e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  25.94 
 
 
411 aa  103  6e-21  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  22.82 
 
 
423 aa  102  1e-20  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_011899  Hore_20470  extracellular solute-binding protein family 1  25.33 
 
 
406 aa  101  2e-20  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000403753  n/a   
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  27.5 
 
 
433 aa  98.6  2e-19  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  26.84 
 
 
415 aa  96.7  8e-19  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_013526  Tter_2303  extracellular solute-binding protein family 1  27.89 
 
 
480 aa  96.7  8e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.316955  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  23.56 
 
 
424 aa  95.9  1e-18  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_007604  Synpcc7942_2417  transcriptional regulator, ABC transporter  23.69 
 
 
421 aa  95.5  2e-18  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0335393 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  22.96 
 
 
407 aa  95.1  2e-18  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_0354  extracellular solute-binding protein  29.31 
 
 
419 aa  92  2e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.188589  n/a   
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  30.38 
 
 
422 aa  90.9  4e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  25.24 
 
 
410 aa  90.5  5e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  23.44 
 
 
448 aa  90.1  6e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2420  extracellular solute-binding protein  27.4 
 
 
420 aa  90.1  6e-17  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.228974 
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  27.6 
 
 
421 aa  90.1  7e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  24.69 
 
 
407 aa  89.7  8e-17  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  24.22 
 
 
410 aa  89.4  1e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  24.22 
 
 
410 aa  89.4  1e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  24.11 
 
 
409 aa  89  1e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  29.1 
 
 
419 aa  88.6  2e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  24.78 
 
 
425 aa  87.4  5e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  24.15 
 
 
426 aa  86.7  7e-16  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_02930  carbohydrate-binding protein  28.08 
 
 
426 aa  85.9  0.000000000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  23.84 
 
 
420 aa  85.9  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  27.7 
 
 
422 aa  86.3  0.000000000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  29.93 
 
 
432 aa  85.9  0.000000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  24.03 
 
 
438 aa  85.5  0.000000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  25.23 
 
 
433 aa  85.5  0.000000000000002  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  24.62 
 
 
441 aa  85.5  0.000000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1604  extracellular solute-binding protein  23.4 
 
 
425 aa  84.3  0.000000000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2603  extracellular solute-binding protein family 1  28.47 
 
 
445 aa  84.3  0.000000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0144502  normal 
 
 
-
 
NC_014151  Cfla_0501  extracellular solute-binding protein family 1  25.98 
 
 
433 aa  83.6  0.000000000000005  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0000488029  hitchhiker  0.0000184856 
 
 
-
 
NC_013172  Bfae_15380  ABC-type sugar transport system, periplasmic component  28.79 
 
 
465 aa  83.6  0.000000000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.479356  n/a   
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  25.4 
 
 
464 aa  83.6  0.000000000000006  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  24.23 
 
 
410 aa  83.2  0.000000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.32 
 
 
414 aa  83.2  0.000000000000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3775  extracellular solute-binding protein family 1  25.89 
 
 
459 aa  82.4  0.00000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.137854  normal 
 
 
-
 
NC_013093  Amir_0403  extracellular solute-binding protein family 1  24.72 
 
 
426 aa  82.8  0.00000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.512139  n/a   
 
 
-
 
NC_011884  Cyan7425_2553  extracellular solute-binding protein family 1  25.41 
 
 
432 aa  82  0.00000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.964139  normal 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  24.38 
 
 
427 aa  81.6  0.00000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  29.25 
 
 
420 aa  81.3  0.00000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_014211  Ndas_5074  extracellular solute-binding protein family 1  28.45 
 
 
447 aa  81.3  0.00000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  26.77 
 
 
443 aa  81.3  0.00000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  30.04 
 
 
452 aa  81.3  0.00000000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_014165  Tbis_1090  extracellular solute-binding protein family 1  24.66 
 
 
436 aa  80.9  0.00000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.667729  normal  0.0232634 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  23.41 
 
 
429 aa  80.9  0.00000000000004  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_014165  Tbis_3251  extracellular solute-binding protein family 1  25.5 
 
 
427 aa  80.9  0.00000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.829082  normal 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  23.39 
 
 
403 aa  80.5  0.00000000000006  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  23.79 
 
 
428 aa  79.7  0.00000000000008  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  26.37 
 
 
410 aa  79  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_011886  Achl_2663  extracellular solute-binding protein family 1  24.93 
 
 
468 aa  79.3  0.0000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_2364  ABC-type sugar transport system periplasmic component-like protein  25.96 
 
 
416 aa  79.3  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128582  normal 
 
 
-
 
NC_011886  Achl_3271  extracellular solute-binding protein family 1  29.93 
 
 
473 aa  79.3  0.0000000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  25.77 
 
 
438 aa  78.2  0.0000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_012912  Dd1591_3386  extracellular solute-binding protein family 1  24.28 
 
 
440 aa  79  0.0000000000002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2057  extracellular solute-binding protein family 1  25.75 
 
 
421 aa  78.6  0.0000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.112802  normal  0.296802 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  25.53 
 
 
466 aa  77.8  0.0000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3999  extracellular solute-binding protein family 1  29.14 
 
 
452 aa  77.8  0.0000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.220113  normal  0.250177 
 
 
-
 
NC_008820  P9303_01821  solute-binding family 1 protein  26.6 
 
 
434 aa  77.8  0.0000000000003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013517  Sterm_4038  extracellular solute-binding protein family 1  22.87 
 
 
405 aa  77.4  0.0000000000004  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  24.46 
 
 
435 aa  77.8  0.0000000000004  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  25.47 
 
 
431 aa  77  0.0000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_008698  Tpen_1453  extracellular solute-binding protein  23.23 
 
 
415 aa  77.4  0.0000000000005  Thermofilum pendens Hrk 5  Archaea  normal  0.0104666  n/a   
 
 
-
 
NC_012858  Rleg_6765  extracellular solute-binding protein family 1  28.51 
 
 
419 aa  77  0.0000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.979933  normal 
 
 
-
 
NC_007413  Ava_3685  extracellular solute-binding protein  21.3 
 
 
432 aa  77  0.0000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5852  extracellular solute-binding protein family 1  28.07 
 
 
419 aa  77  0.0000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  24.27 
 
 
414 aa  77  0.0000000000006  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  27.76 
 
 
423 aa  77  0.0000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  22.4 
 
 
436 aa  76.6  0.0000000000007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0323  family 1 extracellular solute-binding protein  24.04 
 
 
432 aa  76.3  0.0000000000009  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_1088  extracellular solute-binding protein family 1  19.89 
 
 
414 aa  75.5  0.000000000001  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.00683834  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  23.14 
 
 
504 aa  75.9  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  29.1 
 
 
433 aa  75.5  0.000000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_011726  PCC8801_4174  extracellular solute-binding protein family 1  21.82 
 
 
426 aa  75.1  0.000000000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4213  extracellular solute-binding protein family 1  21.82 
 
 
426 aa  75.1  0.000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  0.215316  normal 
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  26.2 
 
 
415 aa  75.5  0.000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_013526  Tter_2659  extracellular solute-binding protein family 1  28.36 
 
 
495 aa  74.7  0.000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0361435  n/a   
 
 
-
 
NC_013521  Sked_11540  ABC-type sugar transport system, periplasmic component  29.27 
 
 
428 aa  75.1  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0159385 
 
 
-
 
NC_010676  Bphyt_4586  extracellular solute-binding protein family 1  32.33 
 
 
417 aa  75.5  0.000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.947174 
 
 
-
 
NC_011899  Hore_13140  extracellular solute-binding protein family 1  23.08 
 
 
424 aa  74.3  0.000000000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3075  extracellular solute-binding protein family 1  27.39 
 
 
423 aa  74.7  0.000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  24.53 
 
 
433 aa  74.3  0.000000000004  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  26.97 
 
 
410 aa  74.3  0.000000000004  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  23.76 
 
 
441 aa  74.3  0.000000000004  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2719  extracellular solute-binding protein family 1  31.22 
 
 
434 aa  73.6  0.000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.233137 
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  27.27 
 
 
420 aa  73.6  0.000000000006  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  27.27 
 
 
420 aa  73.6  0.000000000007  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2920  extracellular solute-binding protein family 1  26.29 
 
 
424 aa  73.6  0.000000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
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