28 homologs were found in PanDaTox collection
for query gene Ndas_1649 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_1649  hypothetical protein  100 
 
 
71 aa  147  4e-35  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0606557  normal 
 
 
-
 
NC_014210  Ndas_1872  hypothetical protein  94.29 
 
 
75 aa  140  8e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5448  hypothetical protein  90.14 
 
 
71 aa  134  3.0000000000000003e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.289379  normal 
 
 
-
 
NC_014210  Ndas_2583  hypothetical protein  96.92 
 
 
70 aa  132  9.999999999999999e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.011334 
 
 
-
 
NC_014210  Ndas_2771  hypothetical protein  95.38 
 
 
70 aa  131  3.9999999999999996e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.604646  normal 
 
 
-
 
NC_013441  Gbro_1042  DNA binding domain protein, excisionase family  35.94 
 
 
82 aa  50.8  0.000006  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5016  DNA binding domain protein, excisionase family  42.11 
 
 
64 aa  48.1  0.00004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0693  DNA binding domain protein, excisionase family  42 
 
 
79 aa  47.4  0.00007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.0633565  n/a   
 
 
-
 
NC_013093  Amir_6709  DNA binding domain protein, excisionase family  39.66 
 
 
72 aa  46.6  0.0001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_3086  DNA binding domain protein, excisionase family  40 
 
 
69 aa  46.2  0.0001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2000  DNA binding domain protein, excisionase family  42.59 
 
 
212 aa  46.2  0.0002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.27976  normal  0.357405 
 
 
-
 
NC_008578  Acel_0258  DNA binding domain-containing protein  40 
 
 
74 aa  44.3  0.0006  Acidothermus cellulolyticus 11B  Bacteria  normal  0.453374  normal 
 
 
-
 
NC_014151  Cfla_2905  DNA binding domain protein, excisionase family  44.9 
 
 
71 aa  44.3  0.0006  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.616527  normal 
 
 
-
 
NC_013595  Sros_0579  hypothetical protein  38.46 
 
 
79 aa  42.4  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_08990  DNA-binding protein, excisionase family  38.78 
 
 
72 aa  42.4  0.002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.269526  n/a   
 
 
-
 
NC_014165  Tbis_0276  excisionase family DNA binding domain-containing protein  38.46 
 
 
73 aa  42.4  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  0.42155  normal 
 
 
-
 
NC_013131  Caci_0301  DNA binding domain protein, excisionase family  40.82 
 
 
67 aa  42.4  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5979  DNA binding domain-containing protein, excisionase family  39.66 
 
 
75 aa  42  0.003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.553184 
 
 
-
 
NC_013174  Jden_2349  DNA binding domain protein, excisionase family  38.78 
 
 
79 aa  42  0.003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2699  excisionase/Xis, DNA-binding  38.78 
 
 
67 aa  42  0.003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0931  DNA binding domain protein, excisionase family  35.71 
 
 
68 aa  41.6  0.004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4511  DNA binding domain-containing protein  39.58 
 
 
88 aa  41.2  0.005  Salinispora arenicola CNS-205  Bacteria  normal  0.812065  hitchhiker  0.00570166 
 
 
-
 
NC_013510  Tcur_4424  DNA binding domain protein, excisionase family  36.54 
 
 
68 aa  40.8  0.006  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1070  resolvase domain-containing protein  36.21 
 
 
197 aa  40.8  0.006  Thermoanaerobacter sp. X514  Bacteria  normal  0.709621  n/a   
 
 
-
 
NC_009380  Strop_4091  DNA binding domain-containing protein  38.78 
 
 
90 aa  40.8  0.006  Salinispora tropica CNB-440  Bacteria  normal  normal  0.446784 
 
 
-
 
NC_013521  Sked_34060  DNA-binding protein, excisionase family  41.67 
 
 
76 aa  40.8  0.007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.910239  normal  0.267084 
 
 
-
 
NC_013947  Snas_0819  DNA binding domain-containing protein, excisionase family  38.78 
 
 
65 aa  40.8  0.007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_03000  DNA-binding protein, excisionase family  38 
 
 
69 aa  40.4  0.009  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.17033  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>