12 homologs were found in PanDaTox collection
for query gene Ndas_1122 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_1122  hypothetical protein  100 
 
 
553 aa  1047    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.106292 
 
 
-
 
NC_012669  Bcav_2693  hypothetical protein  43.04 
 
 
566 aa  308  2.0000000000000002e-82  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.806993  normal  0.190746 
 
 
-
 
NC_003909  BCE_2590  hypothetical protein  30.56 
 
 
618 aa  251  2e-65  Bacillus cereus ATCC 10987  Bacteria  normal  0.193504  n/a   
 
 
-
 
NC_014158  Tpau_3073  ABC transporter permease protein  27.74 
 
 
533 aa  80.9  0.00000000000005  Tsukamurella paurometabola DSM 20162  Bacteria  decreased coverage  0.00508741  n/a   
 
 
-
 
NC_013595  Sros_1322  hypothetical protein  29.86 
 
 
539 aa  75.1  0.000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.322613  normal  0.449633 
 
 
-
 
NC_013235  Namu_2865  hypothetical protein  28.52 
 
 
526 aa  55.5  0.000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0216967  normal  0.115817 
 
 
-
 
NC_011886  Achl_2323  hypothetical protein  31.9 
 
 
523 aa  55.1  0.000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000190454 
 
 
-
 
NC_009953  Sare_5013  hypothetical protein  30.19 
 
 
559 aa  53.5  0.000009  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0000363082 
 
 
-
 
NC_009380  Strop_4501  hypothetical protein  29.52 
 
 
560 aa  52  0.00003  Salinispora tropica CNB-440  Bacteria  normal  0.610631  normal  0.263243 
 
 
-
 
NC_013172  Bfae_23120  hypothetical protein  26.07 
 
 
570 aa  47.4  0.0007  Brachybacterium faecium DSM 4810  Bacteria  normal  0.522082  n/a   
 
 
-
 
NC_013530  Xcel_0944  hypothetical protein  25.89 
 
 
532 aa  44.7  0.005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3106  hypothetical protein  28.79 
 
 
534 aa  43.9  0.008  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000141938  hitchhiker  0.000284669 
 
 
-
 
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