More than 300 homologs were found in PanDaTox collection
for query gene NATL1_03341 on replicon NC_008819
Organism: Prochlorococcus marinus str. NATL1A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013161  Cyan8802_0214  isopropylmalate isomerase large subunit  70.02 
 
 
468 aa  704    Cyanothece sp. PCC 8802  Bacteria  hitchhiker  0.00986239  hitchhiker  0.0021568 
 
 
-
 
NC_008817  P9515_02891  isopropylmalate isomerase large subunit  71.22 
 
 
469 aa  713    Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.81083  n/a   
 
 
-
 
NC_008816  A9601_02781  isopropylmalate isomerase large subunit  70.3 
 
 
468 aa  702    Prochlorococcus marinus str. AS9601  Bacteria  normal  n/a   
 
 
-
 
NC_007335  PMN2A_1622  isopropylmalate isomerase large subunit  98.72 
 
 
469 aa  966    Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3967  isopropylmalate isomerase large subunit  69.81 
 
 
467 aa  706    Anabaena variabilis ATCC 29413  Bacteria  normal  0.177679  normal  0.0198383 
 
 
-
 
NC_014248  Aazo_5028  3-isopropylmalate dehydratase large subunit  68.95 
 
 
467 aa  697    'Nostoc azollae' 0708  Bacteria  normal  0.44739  n/a   
 
 
-
 
NC_007513  Syncc9902_2088  isopropylmalate isomerase large subunit  73.39 
 
 
472 aa  724    Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_007516  Syncc9605_0256  isopropylmalate isomerase large subunit  74.52 
 
 
472 aa  748    Synechococcus sp. CC9605  Bacteria  normal  0.809992  normal 
 
 
-
 
NC_009091  P9301_02791  isopropylmalate isomerase large subunit  71.31 
 
 
467 aa  711    Prochlorococcus marinus str. MIT 9301  Bacteria  normal  0.0248029  n/a   
 
 
-
 
NC_007577  PMT9312_0258  isopropylmalate isomerase large subunit  71 
 
 
469 aa  696    Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1898  isopropylmalate isomerase large subunit  71.31 
 
 
468 aa  706    Synechococcus elongatus PCC 7942  Bacteria  hitchhiker  0.00568531  normal  0.587637 
 
 
-
 
NC_011729  PCC7424_0849  isopropylmalate isomerase large subunit  69.16 
 
 
467 aa  707    Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.339438 
 
 
-
 
NC_008820  P9303_24691  isopropylmalate isomerase large subunit  74.09 
 
 
478 aa  746    Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_1136  isopropylmalate isomerase large subunit  69.81 
 
 
468 aa  704    Cyanothece sp. PCC 7425  Bacteria  normal  0.638522  normal 
 
 
-
 
NC_011726  PCC8801_0217  isopropylmalate isomerase large subunit  70.02 
 
 
468 aa  704    Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008819  NATL1_03341  isopropylmalate isomerase large subunit  100 
 
 
469 aa  974    Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.6876  normal 
 
 
-
 
NC_009976  P9211_02821  isopropylmalate isomerase large subunit  75.48 
 
 
471 aa  757    Prochlorococcus marinus str. MIT 9211  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1604  3-isopropylmalate dehydratase, large subunit  61.85 
 
 
474 aa  629  1e-179  Meiothermus silvanus DSM 9946  Bacteria  normal  0.135102  normal  0.0211413 
 
 
-
 
NC_013946  Mrub_1850  3-isopropylmalate dehydratase large subunit  62.07 
 
 
474 aa  629  1e-179  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_0323  3-isopropylmalate dehydratase, large subunit  64.36 
 
 
468 aa  622  1e-177  Planctomyces limnophilus DSM 3776  Bacteria  decreased coverage  0.000670591  n/a   
 
 
-
 
NC_010571  Oter_2680  isopropylmalate isomerase large subunit  61.37 
 
 
472 aa  611  9.999999999999999e-175  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_0642  isopropylmalate isomerase large subunit  61.03 
 
 
473 aa  607  9.999999999999999e-173  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2656  isopropylmalate isomerase large subunit  59.96 
 
 
473 aa  597  1e-169  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_013922  Nmag_0901  3-isopropylmalate dehydratase, large subunit  59.53 
 
 
474 aa  595  1e-169  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012029  Hlac_0872  isopropylmalate isomerase large subunit  59.96 
 
 
473 aa  594  1e-168  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal 
 
 
-
 
NC_013743  Htur_2765  3-isopropylmalate dehydratase, large subunit  59.53 
 
 
473 aa  580  1e-164  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_010655  Amuc_0666  3-isopropylmalate dehydratase, large subunit  57.63 
 
 
470 aa  573  1.0000000000000001e-162  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3463  3-isopropylmalate dehydratase, large subunit  56.64 
 
 
465 aa  526  1e-148  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0762821  n/a   
 
 
-
 
NC_013159  Svir_09060  3-isopropylmalate dehydratase, large subunit  53.26 
 
 
471 aa  521  1e-146  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.918212  normal 
 
 
-
 
NC_014158  Tpau_1546  aconitate hydratase domain protein  51.18 
 
 
488 aa  520  1e-146  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.406052  n/a   
 
 
-
 
NC_007333  Tfu_0626  isopropylmalate isomerase large subunit  53.48 
 
 
465 aa  516  1.0000000000000001e-145  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2848  3-isopropylmalate dehydratase, large subunit  52.68 
 
 
481 aa  516  1.0000000000000001e-145  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0194  3-isopropylmalate dehydratase, large subunit  55.46 
 
 
469 aa  516  1.0000000000000001e-145  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_8049  3-isopropylmalate dehydratase, large subunit  52.07 
 
 
468 aa  512  1e-144  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.200463  normal 
 
 
-
 
NC_009972  Haur_4441  isopropylmalate isomerase large subunit  51.8 
 
 
471 aa  512  1e-144  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1478  3-isopropylmalate dehydratase, large subunit  51.28 
 
 
486 aa  508  1e-143  Nakamurella multipartita DSM 44233  Bacteria  normal  0.333411  normal  0.827202 
 
 
-
 
NC_013411  GYMC61_0861  isopropylmalate isomerase large subunit  54.04 
 
 
471 aa  511  1e-143  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_1549  isopropylmalate isomerase large subunit  52.85 
 
 
472 aa  510  1e-143  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.269438  normal  0.14031 
 
 
-
 
NC_013947  Snas_4999  3-isopropylmalate dehydratase large subunit  52.62 
 
 
470 aa  504  9.999999999999999e-143  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.653294  normal  0.386887 
 
 
-
 
NC_014210  Ndas_0185  3-isopropylmalate dehydratase, large subunit  51.96 
 
 
468 aa  505  9.999999999999999e-143  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.08009  normal 
 
 
-
 
NC_008699  Noca_3298  3-isopropylmalate dehydratase, large subunit  53.16 
 
 
471 aa  508  9.999999999999999e-143  Nocardioides sp. JS614  Bacteria  normal  0.405916  n/a   
 
 
-
 
NC_013521  Sked_11100  3-isopropylmalate dehydratase, large subunit  52.03 
 
 
479 aa  502  1e-141  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6006  3-isopropylmalate dehydratase, large subunit  51.41 
 
 
472 aa  504  1e-141  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0519027  n/a   
 
 
-
 
NC_011891  A2cp1_1983  isopropylmalate isomerase large subunit  52.44 
 
 
480 aa  502  1e-141  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1921  isopropylmalate isomerase large subunit  50.64 
 
 
481 aa  501  1e-141  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1901  isopropylmalate isomerase large subunit  50.64 
 
 
481 aa  502  1e-141  Mycobacterium sp. JLS  Bacteria  normal  normal  0.918864 
 
 
-
 
NC_008705  Mkms_1967  isopropylmalate isomerase large subunit  50.64 
 
 
481 aa  501  1e-141  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2135  isopropylmalate isomerase large subunit  51.51 
 
 
481 aa  502  1e-141  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13003  isopropylmalate isomerase large subunit  50.43 
 
 
473 aa  499  1e-140  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1980  isopropylmalate isomerase large subunit  51.8 
 
 
480 aa  498  1e-140  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1898  isopropylmalate isomerase large subunit  52.02 
 
 
480 aa  499  1e-140  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2591  isopropylmalate isomerase large subunit  53.62 
 
 
471 aa  498  1e-140  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00933091  n/a   
 
 
-
 
NC_008578  Acel_1591  isopropylmalate isomerase large subunit  52.4 
 
 
473 aa  501  1e-140  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.777227 
 
 
-
 
NC_009338  Mflv_4227  isopropylmalate isomerase large subunit  51.29 
 
 
481 aa  501  1e-140  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.888543 
 
 
-
 
NC_009523  RoseRS_1961  isopropylmalate isomerase large subunit  51.68 
 
 
474 aa  501  1e-140  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4053  3-isopropylmalate dehydratase, large subunit  50.76 
 
 
474 aa  496  1e-139  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1573  3-isopropylmalate dehydratase, large subunit  51.84 
 
 
493 aa  497  1e-139  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.488131  normal 
 
 
-
 
NC_014151  Cfla_2316  3-isopropylmalate dehydratase, large subunit  52.06 
 
 
487 aa  498  1e-139  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000114053 
 
 
-
 
NC_008148  Rxyl_0278  isopropylmalate isomerase large subunit  51.97 
 
 
469 aa  496  1e-139  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0285  3-isopropylmalate dehydratase, large subunit  53.7 
 
 
481 aa  498  1e-139  Maricaulis maris MCS10  Bacteria  normal  0.0292162  normal  0.428024 
 
 
-
 
NC_013412  GYMC61_3567  isopropylmalate isomerase large subunit  52.79 
 
 
477 aa  493  9.999999999999999e-139  Geobacillus sp. Y412MC61  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08740  3-isopropylmalate dehydratase, large subunit  51.19 
 
 
484 aa  494  9.999999999999999e-139  Micrococcus luteus NCTC 2665  Bacteria  decreased coverage  0.000460564  n/a   
 
 
-
 
NC_007958  RPD_0504  isopropylmalate isomerase large subunit  53.35 
 
 
470 aa  491  9.999999999999999e-139  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008787  CJJ81176_0015  isopropylmalate isomerase large subunit  53.1 
 
 
468 aa  493  9.999999999999999e-139  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1149  isopropylmalate isomerase large subunit  50.85 
 
 
481 aa  493  9.999999999999999e-139  Salinispora arenicola CNS-205  Bacteria  normal  unclonable  0.0000000597548 
 
 
-
 
NC_009921  Franean1_1113  isopropylmalate isomerase large subunit  52.07 
 
 
465 aa  493  9.999999999999999e-139  Frankia sp. EAN1pec  Bacteria  normal  0.681996  normal  0.828695 
 
 
-
 
NC_009380  Strop_1258  isopropylmalate isomerase large subunit  51.28 
 
 
481 aa  494  9.999999999999999e-139  Salinispora tropica CNB-440  Bacteria  normal  0.55744  normal  0.382246 
 
 
-
 
NC_008541  Arth_2519  isopropylmalate isomerase large subunit  50.32 
 
 
484 aa  491  9.999999999999999e-139  Arthrobacter sp. FB24  Bacteria  normal  0.252815  n/a   
 
 
-
 
NC_009707  JJD26997_2094  isopropylmalate isomerase large subunit  53.1 
 
 
468 aa  493  9.999999999999999e-139  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1887  isopropylmalate isomerase large subunit  52.89 
 
 
468 aa  489  1e-137  Campylobacter jejuni RM1221  Bacteria  normal  0.574068  n/a   
 
 
-
 
NC_007406  Nwi_2785  isopropylmalate isomerase large subunit  52.7 
 
 
468 aa  491  1e-137  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.378068  normal 
 
 
-
 
NC_013441  Gbro_3215  3-isopropylmalate dehydratase, large subunit  50.75 
 
 
477 aa  491  1e-137  Gordonia bronchialis DSM 43247  Bacteria  normal  0.056695  n/a   
 
 
-
 
NC_007778  RPB_0348  isopropylmalate isomerase large subunit  53.13 
 
 
470 aa  491  1e-137  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0240  isopropylmalate isomerase large subunit  52.88 
 
 
469 aa  490  1e-137  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3742  isopropylmalate isomerase large subunit  50.11 
 
 
466 aa  489  1e-137  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3280  isopropylmalate isomerase large subunit  50.43 
 
 
467 aa  489  1e-137  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.215534  normal 
 
 
-
 
NC_011886  Achl_2256  isopropylmalate isomerase large subunit  49.46 
 
 
484 aa  489  1e-137  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000783708 
 
 
-
 
NC_013595  Sros_8018  3-isopropylmalate dehydratase, large subunit  52.18 
 
 
459 aa  487  1e-136  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_0227  isopropylmalate isomerase large subunit  52.7 
 
 
473 aa  485  1e-136  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.00400027 
 
 
-
 
NC_007964  Nham_3584  isopropylmalate isomerase large subunit  53.13 
 
 
468 aa  487  1e-136  Nitrobacter hamburgensis X14  Bacteria  normal  0.931395  n/a   
 
 
-
 
NC_009485  BBta_0363  isopropylmalate isomerase large subunit  53.35 
 
 
468 aa  488  1e-136  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.271446  normal  0.532793 
 
 
-
 
NC_009675  Anae109_1875  isopropylmalate isomerase large subunit  53.49 
 
 
478 aa  481  1e-135  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.15544 
 
 
-
 
NC_009719  Plav_1423  3-isopropylmalate dehydratase, large subunit  50.95 
 
 
473 aa  483  1e-135  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2357  3-isopropylmalate dehydratase, large subunit  50.76 
 
 
517 aa  484  1e-135  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03087  isopropylmalate isomerase large subunit  52.69 
 
 
466 aa  484  1e-135  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1922  isopropylmalate isomerase large subunit  51.28 
 
 
467 aa  478  1e-134  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2225  3-isopropylmalate dehydratase, large subunit  53.96 
 
 
471 aa  478  1e-134  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.918253  n/a   
 
 
-
 
NC_009664  Krad_1358  3-isopropylmalate dehydratase, large subunit  50 
 
 
477 aa  480  1e-134  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.849318 
 
 
-
 
NC_013172  Bfae_18560  3-isopropylmalate dehydratase, large subunit  49.46 
 
 
479 aa  481  1e-134  Brachybacterium faecium DSM 4810  Bacteria  normal  0.242112  n/a   
 
 
-
 
NC_014165  Tbis_2802  3-isopropylmalate dehydratase large subunit  52.07 
 
 
462 aa  477  1e-133  Thermobispora bispora DSM 43833  Bacteria  normal  0.0861644  normal  0.228539 
 
 
-
 
NC_013124  Afer_1534  3-isopropylmalate dehydratase, large subunit  51.33 
 
 
468 aa  477  1e-133  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.706683  n/a   
 
 
-
 
NC_007777  Francci3_3621  isopropylmalate isomerase large subunit  51.2 
 
 
465 aa  477  1e-133  Frankia sp. CcI3  Bacteria  normal  normal  0.766514 
 
 
-
 
NC_007794  Saro_1170  isopropylmalate isomerase large subunit  49.79 
 
 
478 aa  475  1e-133  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.910867  n/a   
 
 
-
 
NC_010172  Mext_4355  isopropylmalate isomerase large subunit  51.29 
 
 
480 aa  476  1e-133  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0764  isopropylmalate isomerase large subunit  51.5 
 
 
470 aa  477  1e-133  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.266094 
 
 
-
 
NC_008340  Mlg_1228  isopropylmalate isomerase large subunit  50.64 
 
 
469 aa  476  1e-133  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0896395 
 
 
-
 
NC_011757  Mchl_4757  isopropylmalate isomerase large subunit  51.29 
 
 
469 aa  476  1e-133  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0122  isopropylmalate isomerase large subunit  51.4 
 
 
466 aa  472  1e-132  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.924094  normal  0.160243 
 
 
-
 
NC_009800  EcHS_A0077  isopropylmalate isomerase large subunit  51.83 
 
 
466 aa  473  1e-132  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A0123  isopropylmalate isomerase large subunit  51.4 
 
 
466 aa  472  1e-132  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.610682  normal  0.713431 
 
 
-
 
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