More than 300 homologs were found in PanDaTox collection
for query gene Mvan_4644 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_4644  short-chain dehydrogenase/reductase SDR  100 
 
 
279 aa  555  1e-157  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.931829  normal 
 
 
-
 
NC_009338  Mflv_2070  short-chain dehydrogenase/reductase SDR  78.28 
 
 
275 aa  424  1e-118  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0241632 
 
 
-
 
NC_008705  Mkms_4192  short-chain dehydrogenase/reductase SDR  78.73 
 
 
274 aa  400  1e-111  Mycobacterium sp. KMS  Bacteria  normal  0.879856  normal 
 
 
-
 
NC_009077  Mjls_4348  short-chain dehydrogenase/reductase SDR  78.73 
 
 
274 aa  401  1e-111  Mycobacterium sp. JLS  Bacteria  normal  normal  0.201544 
 
 
-
 
NC_008146  Mmcs_4117  short-chain dehydrogenase/reductase SDR  78.73 
 
 
274 aa  400  1e-111  Mycobacterium sp. MCS  Bacteria  normal  0.0106138  n/a   
 
 
-
 
NC_013441  Gbro_1603  short-chain dehydrogenase/reductase SDR  68.42 
 
 
277 aa  332  3e-90  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6830  oxidoreductase  54.09 
 
 
265 aa  238  1e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.356358 
 
 
-
 
NC_014165  Tbis_2317  short-chain dehydrogenase/reductase SDR  51.5 
 
 
263 aa  226  3e-58  Thermobispora bispora DSM 43833  Bacteria  normal  0.49068  normal  0.325129 
 
 
-
 
NC_013510  Tcur_1562  short-chain dehydrogenase/reductase SDR  51.29 
 
 
275 aa  223  2e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0498761  n/a   
 
 
-
 
NC_013757  Gobs_0783  short-chain dehydrogenase/reductase SDR  50.57 
 
 
298 aa  219  3e-56  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3370  short-chain dehydrogenase/reductase SDR  49.45 
 
 
285 aa  216  2.9999999999999998e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.976299 
 
 
-
 
NC_008726  Mvan_3101  short-chain dehydrogenase/reductase SDR  49.45 
 
 
280 aa  213  1.9999999999999998e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.300242  normal  0.231356 
 
 
-
 
NC_011060  Ppha_1918  short-chain dehydrogenase/reductase SDR  41.7 
 
 
280 aa  199  3e-50  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.000963224  n/a   
 
 
-
 
NC_008639  Cpha266_1156  short-chain dehydrogenase/reductase SDR  44.71 
 
 
280 aa  189  2.9999999999999997e-47  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.434492  n/a   
 
 
-
 
NC_011658  BCAH187_A2719  short chain dehydrogenase family protein  39.45 
 
 
273 aa  186  3e-46  Bacillus cereus AH187  Bacteria  normal  0.272681  n/a   
 
 
-
 
NC_003909  BCE_2681  short chain dehydrogenase family protein  39.06 
 
 
273 aa  184  2.0000000000000003e-45  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00380586  n/a   
 
 
-
 
NC_009943  Dole_1249  short-chain dehydrogenase/reductase SDR  42.35 
 
 
273 aa  181  1e-44  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0626824  n/a   
 
 
-
 
NC_008009  Acid345_2397  short-chain dehydrogenase/reductase SDR  38.04 
 
 
284 aa  156  4e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_1129  short-chain dehydrogenase/reductase SDR  38.37 
 
 
278 aa  151  8.999999999999999e-36  Methanoculleus marisnigri JR1  Archaea  normal  0.561593  n/a   
 
 
-
 
NC_009674  Bcer98_1838  short-chain dehydrogenase/reductase SDR  42.39 
 
 
184 aa  151  1e-35  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0709005  n/a   
 
 
-
 
NC_007796  Mhun_2367  short-chain dehydrogenase/reductase SDR  42.55 
 
 
272 aa  151  1e-35  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.264463 
 
 
-
 
NC_007796  Mhun_2368  short-chain dehydrogenase/reductase SDR  38.84 
 
 
274 aa  148  9e-35  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.448097 
 
 
-
 
NC_013440  Hoch_5364  short-chain dehydrogenase/reductase SDR  43.39 
 
 
267 aa  139  4.999999999999999e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  0.676071  normal 
 
 
-
 
NC_008726  Mvan_0852  short-chain dehydrogenase/reductase SDR  45.45 
 
 
286 aa  137  2e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.068211 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  34.12 
 
 
275 aa  134  1.9999999999999998e-30  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_008554  Sfum_0522  short-chain dehydrogenase/reductase SDR  36.07 
 
 
278 aa  131  1.0000000000000001e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3856  short-chain dehydrogenase/reductase SDR  36.71 
 
 
300 aa  130  2.0000000000000002e-29  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.514987 
 
 
-
 
NC_007511  Bcep18194_B2443  Short-chain dehydrogenase/reductase SDR  36.24 
 
 
300 aa  130  3e-29  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_4697  short-chain dehydrogenase/reductase SDR  36.71 
 
 
300 aa  130  3e-29  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.858083  n/a   
 
 
-
 
NC_013595  Sros_0520  short-chain dehydrogenase/reductase SDR  32.86 
 
 
602 aa  130  3e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_3665  short-chain dehydrogenase/reductase SDR  36.71 
 
 
300 aa  130  3e-29  Burkholderia cenocepacia HI2424  Bacteria  normal  0.196954  normal 
 
 
-
 
NC_010552  BamMC406_4527  short-chain dehydrogenase/reductase SDR  36.19 
 
 
311 aa  127  2.0000000000000002e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.207166 
 
 
-
 
NC_011894  Mnod_2884  short-chain dehydrogenase/reductase SDR  43.55 
 
 
273 aa  127  3e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1067  short-chain dehydrogenase/reductase SDR  39.29 
 
 
258 aa  126  5e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1835  3-oxoacyl-(acyl-carrier-protein) reductase  37.95 
 
 
244 aa  124  1e-27  Thermosipho melanesiensis BI429  Bacteria  normal  0.686329  n/a   
 
 
-
 
NC_010681  Bphyt_0979  short-chain dehydrogenase/reductase SDR  39.06 
 
 
246 aa  125  1e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0194  Short-chain dehydrogenase/reductase SDR  36.36 
 
 
244 aa  124  2e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4194  short chain dehydrogenase  39.18 
 
 
253 aa  124  2e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.896625 
 
 
-
 
NC_010531  Pnec_0235  short-chain dehydrogenase/reductase SDR  37.23 
 
 
244 aa  124  2e-27  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_33830  short chain dehydrogenase  35.93 
 
 
568 aa  124  2e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2224  short-chain dehydrogenase/reductase SDR  40.31 
 
 
251 aa  124  2e-27  Chelativorans sp. BNC1  Bacteria  normal  0.475602  n/a   
 
 
-
 
NC_008639  Cpha266_0762  short-chain dehydrogenase/reductase SDR  41.15 
 
 
280 aa  124  2e-27  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009718  Fnod_0313  3-oxoacyl-(acyl-carrier-protein) reductase  36.79 
 
 
239 aa  123  3e-27  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00087118  n/a   
 
 
-
 
NC_011894  Mnod_5663  short-chain dehydrogenase/reductase SDR  35.75 
 
 
274 aa  123  4e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_009523  RoseRS_4552  short-chain dehydrogenase/reductase SDR  40.1 
 
 
246 aa  123  4e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1682  3-hydroxybutyrate dehydrogenase  34.7 
 
 
260 aa  123  4e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0045  short-chain dehydrogenase/reductase SDR  39.18 
 
 
297 aa  123  4e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1266  short-chain dehydrogenase/reductase SDR  40.53 
 
 
278 aa  122  5e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.343225  normal 
 
 
-
 
NC_009077  Mjls_3322  short chain dehydrogenase  35.45 
 
 
588 aa  122  5e-27  Mycobacterium sp. JLS  Bacteria  normal  normal  0.178301 
 
 
-
 
NC_008705  Mkms_3373  short chain dehydrogenase  35.45 
 
 
588 aa  122  5e-27  Mycobacterium sp. KMS  Bacteria  normal  0.855673  normal  0.12205 
 
 
-
 
NC_008025  Dgeo_2238  short-chain dehydrogenase/reductase SDR  37.67 
 
 
317 aa  122  5e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3311  short chain dehydrogenase  35.45 
 
 
588 aa  122  5e-27  Mycobacterium sp. MCS  Bacteria  normal  0.768628  n/a   
 
 
-
 
NC_013730  Slin_2186  short-chain dehydrogenase/reductase SDR  38.66 
 
 
248 aa  122  6e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0361624 
 
 
-
 
NC_008312  Tery_2914  short chain dehydrogenase  37.44 
 
 
255 aa  122  7e-27  Trichodesmium erythraeum IMS101  Bacteria  normal  0.892644  normal  0.135282 
 
 
-
 
NC_012791  Vapar_0808  short-chain dehydrogenase/reductase SDR  38.08 
 
 
252 aa  122  8e-27  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4406  short-chain dehydrogenase/reductase SDR  40 
 
 
253 aa  122  8e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.410481  normal 
 
 
-
 
NC_007511  Bcep18194_B1144  Short-chain dehydrogenase/reductase SDR  33.72 
 
 
307 aa  121  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  0.151567  normal  0.117156 
 
 
-
 
NC_009943  Dole_2823  short chain dehydrogenase  31.1 
 
 
292 aa  121  9.999999999999999e-27  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00207351  n/a   
 
 
-
 
NC_007973  Rmet_3599  short-chain dehydrogenase/reductase SDR  35.04 
 
 
296 aa  121  9.999999999999999e-27  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4313  short chain dehydrogenase  34.53 
 
 
290 aa  121  9.999999999999999e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0268  short-chain dehydrogenase/reductase SDR  37.17 
 
 
250 aa  121  9.999999999999999e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008148  Rxyl_0346  short-chain dehydrogenase/reductase SDR  37.69 
 
 
256 aa  121  9.999999999999999e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0244456  n/a   
 
 
-
 
NC_008391  Bamb_4069  short-chain dehydrogenase/reductase SDR  34.48 
 
 
312 aa  121  9.999999999999999e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.596903 
 
 
-
 
NC_009565  TBFG_10868  short chain dehydrogenase  39.27 
 
 
275 aa  121  9.999999999999999e-27  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00362326 
 
 
-
 
NC_009379  Pnuc_0214  short-chain dehydrogenase/reductase SDR  37.57 
 
 
245 aa  121  1.9999999999999998e-26  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4853  short-chain dehydrogenase/reductase SDR  37.23 
 
 
248 aa  120  3e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.154391  normal  0.241568 
 
 
-
 
NC_006349  BMAA0101  short chain dehydrogenase/reductase family oxidoreductase  33.22 
 
 
302 aa  120  3e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5625  short-chain dehydrogenase/reductase SDR  34.1 
 
 
309 aa  120  3e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.285502  normal 
 
 
-
 
NC_009656  PSPA7_3623  short chain dehydrogenase  40.31 
 
 
253 aa  120  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0211534  n/a   
 
 
-
 
NC_013131  Caci_8731  short chain dehydrogenase  32.97 
 
 
590 aa  120  3e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.199229  normal  0.347677 
 
 
-
 
NC_009767  Rcas_0104  short-chain dehydrogenase/reductase SDR  38.86 
 
 
246 aa  120  3e-26  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.650868  normal 
 
 
-
 
NC_009943  Dole_2194  short-chain dehydrogenase/reductase SDR  31.44 
 
 
280 aa  120  3e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0155651  n/a   
 
 
-
 
NC_009921  Franean1_3282  short-chain dehydrogenase/reductase SDR  37.31 
 
 
268 aa  120  3e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3902  short-chain dehydrogenase/reductase SDR  35.1 
 
 
246 aa  120  3e-26  Chelativorans sp. BNC1  Bacteria  normal  0.809389  n/a   
 
 
-
 
NC_008784  BMASAVP1_1262  short chain dehydrogenase/reductase family oxidoreductase  33.22 
 
 
302 aa  120  3e-26  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2974  short-chain dehydrogenase/reductase SDR  34.32 
 
 
309 aa  120  3e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_5413  short-chain dehydrogenase/reductase SDR  34.77 
 
 
308 aa  120  3e-26  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4675  short-chain dehydrogenase/reductase SDR  34.1 
 
 
309 aa  120  3e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  0.396312  normal  0.215379 
 
 
-
 
NC_008835  BMA10229_1539  short chain dehydrogenase/reductase family oxidoreductase  33.22 
 
 
302 aa  119  3.9999999999999996e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_5043  short-chain dehydrogenase/reductase SDR  35.79 
 
 
300 aa  119  3.9999999999999996e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.680577 
 
 
-
 
NC_009079  BMA10247_A0120  short chain dehydrogenase/reductase family oxidoreductase  33.22 
 
 
302 aa  119  3.9999999999999996e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2714  short-chain dehydrogenase/reductase SDR  38.66 
 
 
294 aa  119  3.9999999999999996e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.199953  normal 
 
 
-
 
NC_008061  Bcen_3693  short-chain dehydrogenase/reductase SDR  34.1 
 
 
309 aa  120  3.9999999999999996e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1954  short chain dehydrogenase/reductase family oxidoreductase  38.86 
 
 
250 aa  120  3.9999999999999996e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44570  putative short-chain dehydrogenase  32.88 
 
 
295 aa  120  3.9999999999999996e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.30545 
 
 
-
 
NC_010524  Lcho_3979  short-chain dehydrogenase/reductase SDR  40.62 
 
 
246 aa  119  6e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00235885 
 
 
-
 
NC_009719  Plav_0548  short-chain dehydrogenase/reductase SDR  41.46 
 
 
261 aa  119  6e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3569  short-chain dehydrogenase/reductase SDR  34.77 
 
 
308 aa  119  7e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  0.683076  hitchhiker  0.00146118 
 
 
-
 
NC_007348  Reut_B3851  Short-chain dehydrogenase/reductase SDR:glucose/ribitol dehydrogenase  42.05 
 
 
277 aa  119  7e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.277606  n/a   
 
 
-
 
NC_007355  Mbar_A0777  2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase  36.92 
 
 
256 aa  119  7e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  unclonable  0.000000000602932 
 
 
-
 
NC_007794  Saro_2473  short-chain dehydrogenase/reductase SDR  39.38 
 
 
256 aa  119  7e-26  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3233  short-chain dehydrogenase/reductase SDR  38.54 
 
 
252 aa  119  7e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4018  short-chain dehydrogenase/reductase SDR  33.33 
 
 
312 aa  118  7.999999999999999e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.169146  normal  0.55969 
 
 
-
 
NC_007492  Pfl01_2470  Short-chain dehydrogenase/reductase SDR  34.84 
 
 
244 aa  119  7.999999999999999e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A2820  dehydrogenases with different specificities  32.89 
 
 
302 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6036  NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR  38.74 
 
 
254 aa  118  9.999999999999999e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.0528417  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2673  short chain dehydrogenase/reductase family oxidoreductase  32.89 
 
 
302 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.181377  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1074  short chain dehydrogenase/reductase family oxidoreductase  32.89 
 
 
302 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0703  short-chain dehydrogenase/reductase SDR  35.6 
 
 
305 aa  117  9.999999999999999e-26  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3649  short chain dehydrogenase  36.89 
 
 
595 aa  117  1.9999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.236438  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>