More than 300 homologs were found in PanDaTox collection
for query gene Mvan_2987 on replicon NC_008726
Organism: Mycobacterium vanbaalenii PYR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008726  Mvan_2987  response regulator receiver protein  100 
 
 
391 aa  764    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.143541  normal  0.900637 
 
 
-
 
NC_009338  Mflv_3268  response regulator receiver protein  88.97 
 
 
391 aa  655    Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_2688  response regulator receiver modulated serine phosphatase  72.85 
 
 
407 aa  545  1e-154  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2732  response regulator receiver protein  72.85 
 
 
407 aa  545  1e-154  Mycobacterium sp. KMS  Bacteria  normal  0.276002  normal  0.519614 
 
 
-
 
NC_009077  Mjls_2718  response regulator receiver protein  72.85 
 
 
407 aa  545  1e-154  Mycobacterium sp. JLS  Bacteria  normal  0.453118  normal  0.333299 
 
 
-
 
NC_013131  Caci_3484  response regulator receiver modulated serine phosphatase  45.31 
 
 
395 aa  291  9e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1126  response regulator receiver modulated serine phosphatase  47.38 
 
 
451 aa  288  2e-76  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_5033  response regulator receiver modulated serine phosphatase  44.56 
 
 
389 aa  271  1e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  0.185229  n/a   
 
 
-
 
NC_009921  Franean1_6523  response regulator receiver modulated serine phosphatase  45.74 
 
 
422 aa  269  5.9999999999999995e-71  Frankia sp. EAN1pec  Bacteria  normal  0.98735  normal  0.0636909 
 
 
-
 
NC_013739  Cwoe_5361  response regulator receiver modulated serine phosphatase  46.34 
 
 
392 aa  265  1e-69  Conexibacter woesei DSM 14684  Bacteria  normal  0.155785  normal 
 
 
-
 
NC_013595  Sros_8460  Serine phosphatase RsbU regulator of sigma subunit-like protein  44.7 
 
 
394 aa  265  1e-69  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0290  response regulator receiver modulated serine phosphatase  46.88 
 
 
390 aa  253  3e-66  Frankia sp. CcI3  Bacteria  normal  0.639758  normal  0.494925 
 
 
-
 
NC_008578  Acel_0056  response regulator receiver modulated serine phosphatase  41.79 
 
 
418 aa  246  6e-64  Acidothermus cellulolyticus 11B  Bacteria  normal  0.287626  normal 
 
 
-
 
NC_014151  Cfla_1576  response regulator receiver modulated serine phosphatase  45.98 
 
 
406 aa  245  9.999999999999999e-64  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0296276 
 
 
-
 
NC_007333  Tfu_2344  response regulator receiver:protein phosphatase 2C-like  40.31 
 
 
409 aa  244  1.9999999999999999e-63  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0442  response regulator receiver modulated serine phosphatase  41.34 
 
 
421 aa  231  2e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.723738  normal  0.440975 
 
 
-
 
NC_013530  Xcel_1263  response regulator receiver modulated serine phosphatase  42.45 
 
 
425 aa  216  5e-55  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.799731  n/a   
 
 
-
 
NC_013521  Sked_22970  serine phosphatase RsbU, regulator of sigma subunit  37.6 
 
 
423 aa  201  3e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.376006 
 
 
-
 
NC_011884  Cyan7425_0788  PAS/PAC sensor hybrid histidine kinase  41.27 
 
 
634 aa  102  2e-20  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2467  response regulator receiver modulated serine phosphatase  29.11 
 
 
385 aa  99.8  7e-20  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0589  response regulator receiver modulated serine phosphatase  27.6 
 
 
371 aa  98.6  2e-19  Rhodothermus marinus DSM 4252  Bacteria  normal  0.420228  n/a   
 
 
-
 
NC_007355  Mbar_A3247  sensory transduction histidine kinase  37.91 
 
 
746 aa  97.4  4e-19  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.0645212 
 
 
-
 
NC_008312  Tery_4231  response regulator receiver modulated diguanylate cyclase  37.9 
 
 
357 aa  95.5  1e-18  Trichodesmium erythraeum IMS101  Bacteria  normal  0.113145  normal  0.678212 
 
 
-
 
NC_013743  Htur_0128  response regulator receiver modulated GAF sensor protein  38.12 
 
 
728 aa  94.4  3e-18  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013131  Caci_4118  ANTAR domain protein with unknown sensor  34.97 
 
 
847 aa  93.6  5e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3854  response regulator receiver Signal transduction histidine kinase  42.19 
 
 
386 aa  92.4  1e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1929  response regulator receiver protein  25.8 
 
 
394 aa  91.7  2e-17  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.310245 
 
 
-
 
NC_009523  RoseRS_3357  response regulator receiver protein  45.97 
 
 
283 aa  92  2e-17  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4343  PAS/PAC sensor hybrid histidine kinase  39.85 
 
 
759 aa  90.5  4e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  0.77937  normal 
 
 
-
 
NC_007005  Psyr_1912  response regulator receiver:stage II sporulation E  26.01 
 
 
394 aa  90.1  5e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.432168  hitchhiker  0.00180426 
 
 
-
 
NC_013131  Caci_4098  protein serine phosphatase with GAF(s) sensor(s)  34.84 
 
 
1045 aa  90.1  6e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.108116 
 
 
-
 
NC_011729  PCC7424_5111  response regulator receiver modulated diguanylate cyclase  38.64 
 
 
479 aa  89.7  8e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009656  PSPA7_2359  putative two-component response regulator  27.95 
 
 
394 aa  89  1e-16  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3449  response regulator receiver protein  27.59 
 
 
371 aa  88.2  2e-16  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_2673  response regulator receiver modulated serine phosphatase  27.51 
 
 
389 aa  88.2  2e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1830  response regulator receiver modulated diguanylate cyclase  29.17 
 
 
941 aa  88.6  2e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_27940  putative two-component response regulator  27.75 
 
 
394 aa  88.6  2e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2819  response regulator receiver protein  27.75 
 
 
562 aa  88.2  2e-16  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0360472 
 
 
-
 
NC_009077  Mjls_2923  putative PAS/PAC sensor protein  31.72 
 
 
393 aa  87.8  3e-16  Mycobacterium sp. JLS  Bacteria  normal  normal  0.212662 
 
 
-
 
NC_008146  Mmcs_2893  putative PAS/PAC sensor protein  31.72 
 
 
393 aa  87.4  4e-16  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_2937  putative PAS/PAC sensor protein  31.72 
 
 
393 aa  87.4  4e-16  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1112  response regulator receiver domain-containing protein  29.04 
 
 
399 aa  87  5e-16  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4164  putative PAS/PAC sensor protein  34.08 
 
 
688 aa  87  6e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.412767  normal  0.407902 
 
 
-
 
NC_007492  Pfl01_3849  response regulator receiver (CheY) modulated Serine phosphatase  26.09 
 
 
412 aa  86.3  8e-16  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.658628 
 
 
-
 
NC_004578  PSPTO_2117  response regulator  24.57 
 
 
394 aa  85.9  0.000000000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0129975  n/a   
 
 
-
 
NC_014210  Ndas_3089  putative PAS/PAC sensor protein  32.46 
 
 
676 aa  85.9  0.000000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0037  response regulator receiver sensor signal transduction histidine kinase  38.1 
 
 
387 aa  85.9  0.000000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_31980  serine phosphatase RsbU, regulator of sigma subunit  32.43 
 
 
453 aa  85.9  0.000000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0585203  normal  0.149129 
 
 
-
 
NC_007333  Tfu_0287  protein phosphatase 2C-like protein  33.95 
 
 
743 aa  85.5  0.000000000000002  Thermobifida fusca YX  Bacteria  normal  0.575817  n/a   
 
 
-
 
NC_011884  Cyan7425_3018  PAS/PAC sensor hybrid histidine kinase  40.32 
 
 
653 aa  85.1  0.000000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.697975  normal 
 
 
-
 
NC_013922  Nmag_2692  response regulator receiver modulated GAF sensor protein  38.06 
 
 
637 aa  84.7  0.000000000000002  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_008541  Arth_3890  response regulator receiver protein  26.84 
 
 
378 aa  85.1  0.000000000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1932  Signal transduction histidine kinase  42.4 
 
 
492 aa  85.1  0.000000000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.0476253  n/a   
 
 
-
 
NC_009901  Spea_0302  response regulator receiver modulated serine phosphatase  24.15 
 
 
400 aa  84.3  0.000000000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3015  multi-sensor signal transduction histidine kinase  38.1 
 
 
500 aa  84.3  0.000000000000003  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_4150  response regulator receiver protein  41.72 
 
 
291 aa  84.3  0.000000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0666389 
 
 
-
 
NC_011832  Mpal_1518  PAS/PAC sensor hybrid histidine kinase  32.84 
 
 
769 aa  84  0.000000000000004  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_013131  Caci_7237  protein serine phosphatase with GAF(s) sensor(s)  34.38 
 
 
579 aa  84  0.000000000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008784  BMASAVP1_0472  sensory box histidine kinase/response regulator  41.6 
 
 
492 aa  84  0.000000000000004  Burkholderia mallei SAVP1  Bacteria  normal  0.798891  n/a   
 
 
-
 
NC_008835  BMA10229_0176  sensory box histidine kinase/response regulator  41.6 
 
 
492 aa  84  0.000000000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1842  response regulator/sensory box histidine kinase  41.6 
 
 
492 aa  84  0.000000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1432  sensory box histidine kinase/response regulator  41.6 
 
 
492 aa  84  0.000000000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.188442  n/a   
 
 
-
 
NC_002977  MCA2750  HAMP domain-containing protein  33.09 
 
 
543 aa  84  0.000000000000005  Methylococcus capsulatus str. Bath  Bacteria  normal  0.362683  n/a   
 
 
-
 
NC_013595  Sros_2264  Serine phosphatase RsbU regulator of sigma subunit-like protein  31.34 
 
 
525 aa  84  0.000000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0874374 
 
 
-
 
NC_007484  Noc_1700  PAS sensor, signal transduction histidine kinase  37.5 
 
 
553 aa  83.6  0.000000000000005  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.012241  n/a   
 
 
-
 
NC_009831  Ssed_2943  response regulator receiver modulated serine phosphatase  24.4 
 
 
470 aa  83.6  0.000000000000005  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0288  protein serine phosphatase with GAF(s) sensor(s)  31.67 
 
 
572 aa  83.2  0.000000000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_1522  response regulator receiver sensor signal transduction histidine kinase  36.22 
 
 
389 aa  82  0.00000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  26.67 
 
 
393 aa  82.8  0.00000000000001  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal 
 
 
-
 
NC_010322  PputGB1_1706  response regulator receiver modulated serine phosphatase  27.25 
 
 
393 aa  82.8  0.00000000000001  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000168842 
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  26.38 
 
 
412 aa  82.4  0.00000000000001  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2165  response regulator  26.67 
 
 
393 aa  81.6  0.00000000000002  Pseudomonas putida KT2440  Bacteria  normal  0.0249002  normal  0.813701 
 
 
-
 
NC_007519  Dde_1723  response regulator receiver (CheY-like) modulated serine phosphatase  26.52 
 
 
381 aa  82  0.00000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00833768  n/a   
 
 
-
 
NC_011773  BCAH820_1070  response regulator  25.44 
 
 
358 aa  81.6  0.00000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  9.209800000000002e-41 
 
 
-
 
NC_008554  Sfum_2453  serine phosphatase  32.26 
 
 
438 aa  82  0.00000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_32720  Response regulator  24.93 
 
 
394 aa  81.6  0.00000000000002  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4365  response regulator receiver protein  28.82 
 
 
340 aa  81.6  0.00000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0915  sigma factor sigB regulation protein  25.44 
 
 
380 aa  81.3  0.00000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00116334  n/a   
 
 
-
 
NC_006274  BCZK0898  sigma factor sigB regulation protein  25.44 
 
 
380 aa  81.3  0.00000000000003  Bacillus cereus E33L  Bacteria  normal  0.503671  n/a   
 
 
-
 
NC_013131  Caci_3071  protein serine/threonine phosphatase  33.92 
 
 
260 aa  81.3  0.00000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.136695 
 
 
-
 
NC_007643  Rru_A1653  guanylate cyclase  32.34 
 
 
433 aa  81.3  0.00000000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.181095  n/a   
 
 
-
 
NC_011726  PCC8801_1495  response regulator receiver sensor signal transduction histidine kinase  36.89 
 
 
389 aa  81.3  0.00000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_1421  response regulator receiver sensor signal transduction histidine kinase  32.05 
 
 
404 aa  80.9  0.00000000000004  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010622  Bphy_1145  multi-sensor signal transduction histidine kinase  40.98 
 
 
490 aa  80.5  0.00000000000005  Burkholderia phymatum STM815  Bacteria  normal  0.894172  normal 
 
 
-
 
NC_013173  Dbac_2998  response regulator receiver protein  24.29 
 
 
377 aa  80.5  0.00000000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2541  multi-sensor signal transduction histidine kinase  40.31 
 
 
874 aa  80.5  0.00000000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_2816  multi-sensor hybrid histidine kinase  37.3 
 
 
682 aa  80.1  0.00000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0864703 
 
 
-
 
NC_008554  Sfum_1869  response regulator receiver sensor signal transduction histidine kinase  32.87 
 
 
553 aa  80.1  0.00000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1035  response regulator  24.94 
 
 
380 aa  79.7  0.00000000000007  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_0709  response regulator receiver modulated GAF sensor protein  37.31 
 
 
564 aa  79.7  0.00000000000007  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013757  Gobs_2239  protein serine phosphatase with GAF(s) sensor(s)  34.53 
 
 
553 aa  79.7  0.00000000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0731  response regulator receiver modulated serine phosphatase  26.1 
 
 
396 aa  79.7  0.00000000000008  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2643  protein serine phosphatase with GAF(s) sensor(s)  34.16 
 
 
688 aa  79.7  0.00000000000009  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000425716  n/a   
 
 
-
 
NC_014211  Ndas_5201  protein serine phosphatase with GAF(s) sensor(s)  32.96 
 
 
728 aa  79.3  0.00000000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.171311  normal  0.162808 
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  28.62 
 
 
384 aa  79.3  0.0000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A1161  response regulator  25.15 
 
 
380 aa  79.3  0.0000000000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_35020  serine phosphatase RsbU, regulator of sigma subunit  31.95 
 
 
437 aa  79.3  0.0000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0347  putative PAS/PAC sensor protein  35.56 
 
 
723 aa  79.3  0.0000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B4268  response regulator  24.94 
 
 
380 aa  79  0.0000000000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00568873 
 
 
-
 
NC_008148  Rxyl_1690  putative PAS/PAC sensor protein  34.3 
 
 
377 aa  78.6  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.074722  n/a   
 
 
-
 
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