10 homologs were found in PanDaTox collection
for query gene Msil_1176 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_1176  hypothetical protein  100 
 
 
146 aa  299  7.000000000000001e-81  Methylocella silvestris BL2  Bacteria  n/a    normal  0.090355 
 
 
-
 
NC_012918  GM21_3996  hypothetical protein  36.59 
 
 
126 aa  60.1  0.000000009  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000072975 
 
 
-
 
NC_011146  Gbem_3912  hypothetical protein  34.96 
 
 
126 aa  59.7  0.00000001  Geobacter bemidjiensis Bem  Bacteria  unclonable  0.00000000148939  n/a   
 
 
-
 
NC_009379  Pnuc_2027  hypothetical protein  28 
 
 
121 aa  56.6  0.0000001  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  decreased coverage  0.0000081553  n/a   
 
 
-
 
NC_009483  Gura_1614  hypothetical protein  31.13 
 
 
124 aa  53.1  0.000001  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000128573  n/a   
 
 
-
 
NC_013037  Dfer_3940  hypothetical protein  31.11 
 
 
146 aa  53.1  0.000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5033  hypothetical protein  29.55 
 
 
168 aa  50.4  0.000008  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.871359 
 
 
-
 
NC_008255  CHU_1551  hypothetical protein  29.82 
 
 
134 aa  48.9  0.00002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.307312  normal 
 
 
-
 
NC_008609  Ppro_2508  hypothetical protein  29.6 
 
 
124 aa  47  0.0001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2579  hypothetical protein  32 
 
 
124 aa  45.4  0.0002  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.000000000230529  normal 
 
 
-
 
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