5 homologs were found in PanDaTox collection
for query gene Msed_1027 on replicon NC_009440
Organism: Metallosphaera sedula DSM 5348



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009440  Msed_1027    100 
 
 
722 bp  1431    Metallosphaera sedula DSM 5348  Archaea  normal  normal  0.411038 
 
 
-
 
NC_009440  Msed_1828    80.63 
 
 
724 bp  289  5.999999999999999e-76  Metallosphaera sedula DSM 5348  Archaea  normal  0.356866  normal 
 
 
-
 
NC_009440  Msed_1830    89.87 
 
 
704 bp  93.7  7e-17  Metallosphaera sedula DSM 5348  Archaea  normal  0.939814  normal 
 
 
-
 
NC_009440  Msed_1847    79.57 
 
 
413 bp  91.7  3e-16  Metallosphaera sedula DSM 5348  Archaea  decreased coverage  0.00000202031  normal 
 
 
-
 
CP001800  Ssol_1599    89.58 
 
 
703 bp  56  0.00001  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
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