28 homologs were found in PanDaTox collection
for query gene Mrad2831_6326 on replicon NC_010509
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010509  Mrad2831_6326  P-type DNA transfer protein VirB5  100 
 
 
236 aa  484  1e-136  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_0531  type IV secretion system protein, putative  59.46 
 
 
254 aa  268  5e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0065  type IV secretion system protein VirB5  45.18 
 
 
238 aa  210  1e-53  Brucella suis 1330  Bacteria  normal  0.0500304  n/a   
 
 
-
 
NC_009504  BOV_A0059  P-type DNA transfer protein VirB5  45.18 
 
 
238 aa  209  4e-53  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6502  P-type DNA transfer protein VirB5  40.62 
 
 
231 aa  152  4e-36  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0165  P-type DNA transfer protein VirB5  39.71 
 
 
236 aa  150  1e-35  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.572956 
 
 
-
 
NC_007953  Bxe_C0452  putative type IV secretion system protein VirB5/TraF  38.32 
 
 
235 aa  145  4.0000000000000006e-34  Burkholderia xenovorans LB400  Bacteria  normal  0.385252  normal 
 
 
-
 
NC_007951  Bxe_A2653  putative type IV secretion system protein VirB5/TraF  38.92 
 
 
237 aa  144  9e-34  Burkholderia xenovorans LB400  Bacteria  normal  0.0243741  normal 
 
 
-
 
NC_007951  Bxe_A1758  putative type IV secretion system protein VirB5/TraF  37.44 
 
 
231 aa  143  2e-33  Burkholderia xenovorans LB400  Bacteria  normal  0.291545  normal  0.256118 
 
 
-
 
NC_008543  Bcen2424_3317  type IV secretion system family protein  39.59 
 
 
235 aa  142  5e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4198  P-type DNA transfer protein VirB5  36.21 
 
 
236 aa  142  5e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.835189 
 
 
-
 
NC_011891  A2cp1_1139  P-type DNA transfer protein VirB5  42.6 
 
 
231 aa  137  2e-31  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0867  type IV secretion system family protein  34.13 
 
 
238 aa  120  9.999999999999999e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010627  Bphy_7533  type IV secretion system family protein  42.35 
 
 
225 aa  119  3.9999999999999996e-26  Burkholderia phymatum STM815  Bacteria  normal  0.0210387  normal  0.0576761 
 
 
-
 
NC_012792  Vapar_5817  type IV secretion system family protein  33.33 
 
 
244 aa  110  2.0000000000000002e-23  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008771  Veis_5025  type IV secretion system family protein  35.45 
 
 
221 aa  95.1  8e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0212937  n/a   
 
 
-
 
NC_009667  Oant_0678  P-type DNA transfer protein VirB5  28.84 
 
 
232 aa  81.6  0.000000000000009  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.511281  n/a   
 
 
-
 
NC_008242  Meso_4345  type IV secretion system  31.7 
 
 
231 aa  73.9  0.000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009432  Rsph17025_4375  type IV secretion system family protein  24.78 
 
 
239 aa  61.6  0.00000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.669124 
 
 
-
 
NC_009475  BBta_p0254  Type IV secretory pathway AvhB5 protein  23.38 
 
 
240 aa  60.1  0.00000003  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_009717  Xaut_5085  P-type DNA transfer protein VirB5  27.14 
 
 
231 aa  59.7  0.00000004  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.997151 
 
 
-
 
NC_009508  Swit_5006  type IV secretion system family protein  28.57 
 
 
238 aa  57.8  0.0000002  Sphingomonas wittichii RW1  Bacteria  decreased coverage  0.000746811  normal  0.254693 
 
 
-
 
NC_011092  SeSA_B0109  TriD protein  22.84 
 
 
238 aa  50.8  0.00002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010679  Bphyt_7348  type IV secretion system family protein  27.33 
 
 
234 aa  49.3  0.00005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.260808 
 
 
-
 
NC_011148  SeAg_A0029  putative conjugal transfer protein  25.11 
 
 
217 aa  47.8  0.0002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  n/a    n/a   
 
 
-
 
NC_009469  Acry_3524  type IV secretion system family protein  24.08 
 
 
252 aa  45.8  0.0005  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_012854  Rleg_6490  hypothetical protein  44.26 
 
 
104 aa  45.8  0.0007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.721225 
 
 
-
 
NC_012912  Dd1591_1486  type IV secretion system family protein  22.65 
 
 
238 aa  43.9  0.002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
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