More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_2595 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_2595  Crp/FNR family transcriptional regulator  100 
 
 
251 aa  501  1e-141  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.396823  normal 
 
 
-
 
NC_010511  M446_6129  Crp/FNR family transcriptional regulator  71.36 
 
 
267 aa  303  1.0000000000000001e-81  Methylobacterium sp. 4-46  Bacteria  normal  0.0255629  normal 
 
 
-
 
NC_011894  Mnod_2132  transcriptional regulator, Crp/Fnr family  69.95 
 
 
293 aa  299  4e-80  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.263338  n/a   
 
 
-
 
NC_011666  Msil_1511  transcriptional regulator, Crp/Fnr family  50.99 
 
 
269 aa  182  3e-45  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009484  Acry_1580  CRP/FNR family transcriptional regulator  46.91 
 
 
240 aa  144  9e-34  Acidiphilium cryptum JF-5  Bacteria  normal  0.391426  n/a   
 
 
-
 
NC_008347  Mmar10_2709  transcriptional activator FtrB  39.81 
 
 
232 aa  141  9e-33  Maricaulis maris MCS10  Bacteria  normal  normal  0.0829617 
 
 
-
 
NC_008687  Pden_4238  transcriptional activator FtrB  40.69 
 
 
234 aa  132  3.9999999999999996e-30  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.363885 
 
 
-
 
NC_010338  Caul_3861  transcriptional activator FtrB  38.73 
 
 
256 aa  132  6.999999999999999e-30  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0301  transcriptional activator FtrB  32.84 
 
 
236 aa  112  7.000000000000001e-24  Brucella suis 1330  Bacteria  normal  0.025844  n/a   
 
 
-
 
NC_009504  BOV_A0277  transcriptional activator FtrB  32.84 
 
 
236 aa  112  7.000000000000001e-24  Brucella ovis ATCC 25840  Bacteria  normal  0.739319  n/a   
 
 
-
 
NC_009668  Oant_2889  transcriptional activator FtrB  31.25 
 
 
239 aa  112  8.000000000000001e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.22661  n/a   
 
 
-
 
NC_011662  Tmz1t_1286  transcriptional regulator, Crp/Fnr family  32.65 
 
 
227 aa  102  8e-21  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1356  transcriptional regulator, Crp/Fnr family  32.22 
 
 
222 aa  94.7  1e-18  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_1658  transcriptional regulator, Crp/Fnr family  32.22 
 
 
222 aa  94.7  1e-18  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.365354  n/a   
 
 
-
 
NC_011769  DvMF_0993  transcriptional regulator, Crp/Fnr family  34.21 
 
 
229 aa  93.6  3e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.98476 
 
 
-
 
NC_013510  Tcur_0407  transcriptional regulator, Crp/Fnr family  34.41 
 
 
243 aa  93.6  3e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1522  cyclic nucleotide-binding  32.35 
 
 
241 aa  91.7  1e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.500349  normal  0.967279 
 
 
-
 
NC_007925  RPC_1012  Crp/FNR family transcriptional regulator  31.76 
 
 
241 aa  89.4  5e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.88102  normal  0.736744 
 
 
-
 
NC_011206  Lferr_0981  transcriptional regulator, Crp/Fnr family  29 
 
 
246 aa  89  7e-17  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0154476 
 
 
-
 
NC_011761  AFE_0857  transcriptional regulator, Crp/Fnr family  29 
 
 
229 aa  88.2  1e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2644  Crp/FNR family transcriptional regulator  30.37 
 
 
248 aa  88.2  1e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.446339  n/a   
 
 
-
 
NC_011004  Rpal_0740  transcriptional regulator, Crp/Fnr family  31.18 
 
 
255 aa  86.3  4e-16  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3445  Crp/FNR family transcriptional regulator  29.41 
 
 
228 aa  85.1  9e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.90711  unclonable  0.00000836213 
 
 
-
 
NC_011884  Cyan7425_2574  transcriptional regulator, Crp/Fnr family  29.59 
 
 
236 aa  85.1  0.000000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3187  Crp/FNR family transcriptional regulator  29.9 
 
 
231 aa  84  0.000000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0154809 
 
 
-
 
NC_011662  Tmz1t_2606  transcriptional regulator, Crp/Fnr family  30.89 
 
 
253 aa  83.6  0.000000000000002  Thauera sp. MZ1T  Bacteria  normal  0.193309  n/a   
 
 
-
 
NC_008751  Dvul_0700  CRP/FNR family transcriptional regulator  30.73 
 
 
228 aa  82  0.000000000000009  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.259996 
 
 
-
 
NC_009953  Sare_4620  Crp/FNR family transcriptional regulator  35.05 
 
 
237 aa  81.3  0.00000000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.128051 
 
 
-
 
NC_007298  Daro_3198  Crp/FNR family transcriptional regulator  28.97 
 
 
231 aa  81.6  0.00000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0851  CRP/FNR family transcriptional regulator  28.5 
 
 
229 aa  80.5  0.00000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  0.0183246  n/a   
 
 
-
 
NC_007517  Gmet_0092  Crp/FNR family transcriptional regulator  29.19 
 
 
230 aa  79.7  0.00000000000004  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000000552774  hitchhiker  0.0000198015 
 
 
-
 
NC_002939  GSU3421  Crp/FNR family transcriptional regulator  28.71 
 
 
241 aa  79.3  0.00000000000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3466  regulator of Biofilm formation Fnr Family  26.52 
 
 
235 aa  79  0.00000000000007  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1691  CRP/FNR family transcriptional regulator  31.55 
 
 
232 aa  79  0.00000000000007  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00272653  normal  0.637065 
 
 
-
 
NC_012918  GM21_3468  transcriptional regulator, Crp/Fnr family  28.87 
 
 
227 aa  77.8  0.0000000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_3406  transcriptional regulator, Crp/Fnr family  28.87 
 
 
227 aa  77.8  0.0000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.757412  n/a   
 
 
-
 
NC_008686  Pden_2478  CRP/FNR family transcriptional regulator  27.08 
 
 
249 aa  76.3  0.0000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.651433 
 
 
-
 
NC_012850  Rleg_3301  transcriptional regulator, Crp/Fnr family  25.71 
 
 
227 aa  75.9  0.0000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.306356 
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  28.28 
 
 
227 aa  75.1  0.000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2636  Crp/FNR family transcriptional regulator  31.86 
 
 
234 aa  74.7  0.000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2803  transcriptional regulator, Crp/Fnr family  27.45 
 
 
229 aa  74.7  0.000000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_3189  transcriptional regulator  27.14 
 
 
236 aa  74.3  0.000000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1939  transcriptional regulator, Crp/Fnr family  31.94 
 
 
235 aa  74.3  0.000000000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2600  Crp/FNR family transcriptional regulator  29.21 
 
 
229 aa  74.3  0.000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0103419  n/a   
 
 
-
 
NC_011004  Rpal_0837  transcriptional regulator, Crp/Fnr family  29.23 
 
 
234 aa  72.8  0.000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1801  cyclic nucleotide-binding domain-containing protein  29.8 
 
 
229 aa  71.2  0.00000000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02297  transcription regulator protein  27.75 
 
 
225 aa  70.5  0.00000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.419231 
 
 
-
 
NC_010524  Lcho_1454  Crp/FNR family transcriptional regulator  29.33 
 
 
252 aa  71.2  0.00000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009952  Dshi_3191  transcriptional regulator Dnr  30.57 
 
 
227 aa  70.5  0.00000000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  23.71 
 
 
225 aa  70.1  0.00000000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0060  Crp/FNR family transcriptional regulator  28.5 
 
 
234 aa  70.1  0.00000000003  Rhodoferax ferrireducens T118  Bacteria  normal  0.237094  n/a   
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  28.95 
 
 
240 aa  70.1  0.00000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_06870  transcriptional regulator Dnr  28.88 
 
 
227 aa  70.1  0.00000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.156456  normal 
 
 
-
 
NC_009656  PSPA7_0628  transcriptional regulator Dnr  28.88 
 
 
227 aa  69.7  0.00000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2118  transcriptional regulator, Crp/Fnr family  27.78 
 
 
227 aa  69.7  0.00000000004  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.545546  n/a   
 
 
-
 
NC_010571  Oter_2867  Crp/FNR family transcriptional regulator  28.72 
 
 
241 aa  69.7  0.00000000004  Opitutus terrae PB90-1  Bacteria  normal  0.343371  normal  0.792405 
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  27.37 
 
 
226 aa  69.7  0.00000000004  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_006348  BMA0619  cyclic nucleotide-binding domain-containing protein  29.44 
 
 
229 aa  69.7  0.00000000005  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3176  transcriptional regulator, Crp/Fnr family  25.52 
 
 
230 aa  69.7  0.00000000005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_1706  cyclic nucleotide-binding protein  29.44 
 
 
230 aa  69.3  0.00000000005  Burkholderia mallei NCTC 10247  Bacteria  normal  0.450772  n/a   
 
 
-
 
NC_007434  BURPS1710b_2817  cyclic nucleotide-binding domain-containing protein  29.44 
 
 
229 aa  69.7  0.00000000005  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2695  cyclic nucleotide-binding protein  29.44 
 
 
229 aa  69.7  0.00000000005  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2752  cyclic nucleotide-binding protein  29.44 
 
 
230 aa  69.3  0.00000000005  Burkholderia pseudomallei 1106a  Bacteria  normal  0.339389  n/a   
 
 
-
 
NC_008836  BMA10229_A2895  cyclic nucleotide-binding domain-containing protein  29.44 
 
 
230 aa  69.3  0.00000000005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.869141  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2392  cyclic nucleotide-binding domain-containing protein  29.44 
 
 
230 aa  69.3  0.00000000005  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1036  cyclic nucleotide-binding  29.02 
 
 
245 aa  69.3  0.00000000006  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2593  Crp/FNR family transcriptional regulator  29.36 
 
 
254 aa  68.9  0.00000000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.431237  normal  0.296758 
 
 
-
 
NC_013169  Ksed_20120  cAMP-binding protein  31.67 
 
 
223 aa  68.2  0.0000000001  Kytococcus sedentarius DSM 20547  Bacteria  hitchhiker  0.00290987  normal  0.0142715 
 
 
-
 
NC_005957  BT9727_1958  Crp/FNR family transcriptional regulator  25 
 
 
230 aa  67  0.0000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0304498  n/a   
 
 
-
 
NC_006274  BCZK1936  Crp/FNR family transcriptional regulator  25 
 
 
230 aa  67  0.0000000002  Bacillus cereus E33L  Bacteria  normal  0.308171  n/a   
 
 
-
 
NC_011992  Dtpsy_1709  transcriptional regulator, Crp/Fnr family  30.43 
 
 
254 aa  67.4  0.0000000002  Acidovorax ebreus TPSY  Bacteria  normal  0.0525745  n/a   
 
 
-
 
NC_007404  Tbd_0079  Crp/FNR family transcriptional regulator  27.78 
 
 
225 aa  67.8  0.0000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.849443  normal  0.162256 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  27.81 
 
 
227 aa  67.4  0.0000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_011658  BCAH187_A2279  transcriptional regulator, Crp/Fnr family  25 
 
 
230 aa  67.4  0.0000000002  Bacillus cereus AH187  Bacteria  normal  0.216294  n/a   
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  28.43 
 
 
226 aa  67  0.0000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3585  Crp/FNR family transcriptional regulator  28.35 
 
 
215 aa  67  0.0000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.921585 
 
 
-
 
NC_011773  BCAH820_2165  transcriptional regulator, Crp/Fnr family  25 
 
 
230 aa  67  0.0000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008782  Ajs_1904  CRP/FNR family transcriptional regulator  30.43 
 
 
254 aa  67.4  0.0000000002  Acidovorax sp. JS42  Bacteria  normal  0.0603838  normal  0.510939 
 
 
-
 
NC_005945  BAS1984  Crp/FNR family transcriptional regulator  25 
 
 
230 aa  67  0.0000000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.513682  n/a   
 
 
-
 
NC_009674  Bcer98_3398  CRP/FNR family transcriptional regulator  25.52 
 
 
230 aa  67  0.0000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2376  CRP/FNR family transcriptional regulator  29.05 
 
 
226 aa  66.6  0.0000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.253524 
 
 
-
 
NC_007530  GBAA_2132  Crp/FNR family transcriptional regulator  25 
 
 
226 aa  66.6  0.0000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2139  transcriptional regulator, Crp/Fnr family  25 
 
 
230 aa  67  0.0000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  23.96 
 
 
223 aa  66.6  0.0000000003  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_010678  Rpic_4660  transcriptional regulator, Crp/Fnr family  27.47 
 
 
225 aa  66.2  0.0000000004  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3583  transcriptional regulator, Crp/Fnr family  27.47 
 
 
225 aa  66.2  0.0000000004  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_1975  Crp/FNR family transcriptional regulator  25 
 
 
230 aa  66.2  0.0000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1785  transcriptional regulator, Crp/Fnr family  28.33 
 
 
225 aa  66.6  0.0000000004  Ralstonia pickettii 12D  Bacteria  normal  0.0232074  normal  0.813169 
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  25.6 
 
 
243 aa  66.2  0.0000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_011992  Dtpsy_3443  transcriptional regulator, Crp/Fnr family  26.11 
 
 
229 aa  65.9  0.0000000006  Acidovorax ebreus TPSY  Bacteria  normal  0.12986  n/a   
 
 
-
 
NC_008576  Mmc1_0460  Crp/FNR family transcriptional regulator  28.06 
 
 
232 aa  65.9  0.0000000006  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.884408 
 
 
-
 
NC_007643  Rru_A2635  Crp/FNR family transcriptional regulator  30.1 
 
 
252 aa  65.5  0.0000000008  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.545323  n/a   
 
 
-
 
NC_007298  Daro_1669  Crp/FNR family transcriptional regulator  28.89 
 
 
233 aa  65.1  0.000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2109  transcriptional regulator, Crp/Fnr family  27.87 
 
 
225 aa  64.7  0.000000002  Ralstonia pickettii 12J  Bacteria  normal  0.170093  normal 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  23.68 
 
 
225 aa  63.9  0.000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  28.14 
 
 
225 aa  63.5  0.000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1061  Crp family transcriptional regulator  26.49 
 
 
214 aa  63.5  0.000000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0336611  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0465  transcriptional regulator, Crp/Fnr family  25.91 
 
 
223 aa  63.2  0.000000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00000000196856  n/a   
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  22.71 
 
 
243 aa  62.8  0.000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_008009  Acid345_1498  Crp/FNR family transcriptional regulator  27.62 
 
 
239 aa  62.4  0.000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.163113  normal 
 
 
-
 
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