More than 300 homologs were found in PanDaTox collection
for query gene Mpe_A1620 on replicon NC_008825
Organism: Methylibium petroleiphilum PM1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010622  Bphy_1314  inosine 5'-monophosphate dehydrogenase  75.26 
 
 
486 aa  768    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1031  inosine 5'-monophosphate dehydrogenase  68.3 
 
 
489 aa  636    Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A2024  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  759    Burkholderia mallei SAVP1  Bacteria  normal  0.637626  n/a   
 
 
-
 
NC_002977  MCA0291  inosine-5'-monophosphate dehydrogenase  69.86 
 
 
487 aa  689    Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2405  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  759    Burkholderia pseudomallei 668  Bacteria  normal  0.323419  n/a   
 
 
-
 
NC_003295  RSc1429  inosine 5'-monophosphate dehydrogenase  73.82 
 
 
487 aa  742    Ralstonia solanacearum GMI1000  Bacteria  normal  0.0657932  normal  0.0240553 
 
 
-
 
NC_011992  Dtpsy_1260  inosine-5'-monophosphate dehydrogenase  80.86 
 
 
491 aa  771    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3008  inosine-5'-monophosphate dehydrogenase  80.04 
 
 
491 aa  784    Delftia acidovorans SPH-1  Bacteria  normal  0.0175212  normal 
 
 
-
 
NC_004578  PSPTO_1449  inosine-5-monophosphate dehydrogenase  68.51 
 
 
489 aa  652    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.327774  n/a   
 
 
-
 
NC_010501  PputW619_4194  inosine 5'-monophosphate dehydrogenase  68.51 
 
 
489 aa  640    Pseudomonas putida W619  Bacteria  normal  0.920675  normal 
 
 
-
 
NC_006348  BMA1524  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  759    Burkholderia mallei ATCC 23344  Bacteria  normal  0.048391  n/a   
 
 
-
 
NC_006368  lpp1688  hypothetical protein  64.77 
 
 
490 aa  661    Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1687  hypothetical protein  64.77 
 
 
490 aa  662    Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_1261  inosine 5'-monophosphate dehydrogenase  68.1 
 
 
489 aa  657    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1360  inosine-5'-monophosphate dehydrogenase  62.88 
 
 
490 aa  644    Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_2338  inosine-5'-monophosphate dehydrogenase  73.67 
 
 
487 aa  729    Dechloromonas aromatica RCB  Bacteria  normal  0.879992  normal  0.100057 
 
 
-
 
NC_007347  Reut_A1856  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
487 aa  754    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2061  inosine-5'-monophosphate dehydrogenase  89.78 
 
 
489 aa  876    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0144949 
 
 
-
 
NC_007404  Tbd_1752  inosine-5'-monophosphate dehydrogenase  73.42 
 
 
486 aa  711    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.853386 
 
 
-
 
NC_007434  BURPS1710b_2549  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  759    Burkholderia pseudomallei 1710b  Bacteria  normal  0.425317  n/a   
 
 
-
 
NC_007484  Noc_0613  IMP dehydrogenase  67.69 
 
 
486 aa  686    Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000830235  n/a   
 
 
-
 
NC_007492  Pfl01_4588  inosine 5'-monophosphate dehydrogenase  69.12 
 
 
489 aa  662    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_1295  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  759    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5301  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  761    Burkholderia sp. 383  Bacteria  normal  0.446018  normal  0.148731 
 
 
-
 
NC_010531  Pnec_0529  inosine 5'-monophosphate dehydrogenase  73.82 
 
 
487 aa  744    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_2011  inosine 5'-monophosphate dehydrogenase  75.46 
 
 
486 aa  757    Burkholderia cenocepacia MC0-3  Bacteria  normal  0.438138  normal 
 
 
-
 
NC_010551  BamMC406_1893  inosine 5'-monophosphate dehydrogenase  75.26 
 
 
486 aa  757    Burkholderia ambifaria MC40-6  Bacteria  normal  0.0489208  normal 
 
 
-
 
NC_013422  Hneap_0609  inosine-5'-monophosphate dehydrogenase  68.71 
 
 
486 aa  689    Halothiobacillus neapolitanus c2  Bacteria  normal  0.050446  n/a   
 
 
-
 
NC_007520  Tcr_1616  inosine-5'-monophosphate dehydrogenase  63.19 
 
 
486 aa  642    Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1200  inosine-5'-monophosphate dehydrogenase  69.73 
 
 
486 aa  711    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.608786  n/a   
 
 
-
 
NC_008789  Hhal_1682  inosine-5'-monophosphate dehydrogenase  68.64 
 
 
514 aa  677    Halorhodospira halophila SL1  Bacteria  normal  0.155444  n/a   
 
 
-
 
NC_007651  BTH_I2056  inosine 5'-monophosphate dehydrogenase  75.87 
 
 
486 aa  759    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1035  inosine-5'-monophosphate dehydrogenase  69.33 
 
 
486 aa  665    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3287  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  759    Burkholderia mallei NCTC 10229  Bacteria  decreased coverage  0.00821787  n/a   
 
 
-
 
NC_009379  Pnuc_1423  inosine 5'-monophosphate dehydrogenase  74.23 
 
 
487 aa  736    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2548  inosine-5'-monophosphate dehydrogenase  80.86 
 
 
491 aa  771    Acidovorax sp. JS42  Bacteria  normal  hitchhiker  0.00685528 
 
 
-
 
NC_009439  Pmen_3486  inosine 5'-monophosphate dehydrogenase  68.3 
 
 
489 aa  682    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2288  inosine-5'-monophosphate dehydrogenase  79.96 
 
 
489 aa  823    Rhodoferax ferrireducens T118  Bacteria  normal  0.453935  n/a   
 
 
-
 
NC_007912  Sde_1459  inosine-5'-monophosphate dehydrogenase  65.37 
 
 
556 aa  660    Saccharophagus degradans 2-40  Bacteria  normal  0.439962  normal 
 
 
-
 
NC_007947  Mfla_1141  inosine-5'-monophosphate dehydrogenase  75.05 
 
 
486 aa  759    Methylobacillus flagellatus KT  Bacteria  normal  normal  0.144187 
 
 
-
 
NC_007948  Bpro_2440  inosine-5'-monophosphate dehydrogenase  83.03 
 
 
489 aa  821    Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1706  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  761    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2623  inosine-5'-monophosphate dehydrogenase  72.13 
 
 
487 aa  714    Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1306  inosine 5'-monophosphate dehydrogenase  73.82 
 
 
487 aa  743    Ralstonia pickettii 12J  Bacteria  normal  0.24376  normal  0.894393 
 
 
-
 
NC_007969  Pcryo_1005  inosine-5'-monophosphate dehydrogenase  62.88 
 
 
490 aa  644    Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1461  inosine 5'-monophosphate dehydrogenase  76.07 
 
 
487 aa  756    Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.296416 
 
 
-
 
NC_010513  Xfasm12_1589  inosine 5'-monophosphate dehydrogenase  65.71 
 
 
485 aa  667    Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2457  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  759    Burkholderia pseudomallei 1106a  Bacteria  normal  0.195801  n/a   
 
 
-
 
NC_009512  Pput_1071  inosine 5'-monophosphate dehydrogenase  68.3 
 
 
489 aa  636    Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6086  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  761    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2001  inosine-5'-monophosphate dehydrogenase  81.39 
 
 
489 aa  810    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.488937 
 
 
-
 
NC_008786  Veis_1246  inosine-5'-monophosphate dehydrogenase  82.48 
 
 
491 aa  837    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00905  inosine 5'-monophosphate dehydrogenase  65.98 
 
 
485 aa  666    Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0297709  n/a   
 
 
-
 
NC_012791  Vapar_2761  inosine-5'-monophosphate dehydrogenase  81.8 
 
 
489 aa  795    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1029  inosine 5'-monophosphate dehydrogenase  68.51 
 
 
489 aa  639    Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1014  inosine-5'-monophosphate dehydrogenase  68.92 
 
 
488 aa  671    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1370  inosine 5'-monophosphate dehydrogenase  73.62 
 
 
487 aa  743    Ralstonia pickettii 12D  Bacteria  normal  0.810739  normal 
 
 
-
 
NC_008390  Bamb_2024  inosine 5'-monophosphate dehydrogenase  75.26 
 
 
486 aa  757    Burkholderia ambifaria AMMD  Bacteria  normal  0.363824  n/a   
 
 
-
 
NC_010681  Bphyt_2431  inosine 5'-monophosphate dehydrogenase  74.64 
 
 
486 aa  752    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.171445 
 
 
-
 
NC_009524  PsycPRwf_1261  inosine-5'-monophosphate dehydrogenase  62.93 
 
 
490 aa  642    Psychrobacter sp. PRwf-1  Bacteria  normal  0.289977  normal  0.031693 
 
 
-
 
NC_008740  Maqu_1728  inosine-5'-monophosphate dehydrogenase  67.56 
 
 
494 aa  663    Marinobacter aquaeolei VT8  Bacteria  normal  0.716764  n/a   
 
 
-
 
NC_008542  Bcen2424_1991  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  761    Burkholderia cenocepacia HI2424  Bacteria  normal  0.287012  n/a   
 
 
-
 
NC_011761  AFE_1777  inosine-5'-monophosphate dehydrogenase  69.94 
 
 
486 aa  684    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.814385  n/a   
 
 
-
 
NC_010577  XfasM23_1532  inosine 5'-monophosphate dehydrogenase  65.71 
 
 
485 aa  666    Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1620  inosine-5'-monophosphate dehydrogenase  100 
 
 
489 aa  985    Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.690045 
 
 
-
 
NC_010084  Bmul_1285  inosine 5'-monophosphate dehydrogenase  75.66 
 
 
486 aa  741    Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0259426  normal  0.434243 
 
 
-
 
NC_011071  Smal_1670  inosine 5'-monophosphate dehydrogenase  66.67 
 
 
485 aa  666    Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0531396  normal  0.274941 
 
 
-
 
NC_011206  Lferr_1453  inosine-5'-monophosphate dehydrogenase  69.94 
 
 
486 aa  684    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.136087  normal 
 
 
-
 
NC_008752  Aave_3370  inosine-5'-monophosphate dehydrogenase  83.23 
 
 
489 aa  845    Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_39730  inosine 5'-monophosphate dehydrogenase  70.14 
 
 
489 aa  651    Azotobacter vinelandii DJ  Bacteria  normal  0.239623  n/a   
 
 
-
 
NC_013889  TK90_1913  inosine-5'-monophosphate dehydrogenase  68.71 
 
 
486 aa  669    Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0730  inosine-5'-monophosphate dehydrogenase  65.1 
 
 
489 aa  632  1e-180  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0420  inosine 5'-monophosphate dehydrogenase  61.07 
 
 
487 aa  622  1e-177  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3120  inosine 5'-monophosphate dehydrogenase  61.43 
 
 
489 aa  618  1e-176  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.899033  n/a   
 
 
-
 
NC_008345  Sfri_1137  inosine 5'-monophosphate dehydrogenase  60.69 
 
 
488 aa  619  1e-176  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00151864  n/a   
 
 
-
 
NC_009656  PSPA7_1346  inosine 5'-monophosphate dehydrogenase  66.26 
 
 
489 aa  612  9.999999999999999e-175  Pseudomonas aeruginosa PA7  Bacteria  normal  0.43014  n/a   
 
 
-
 
NC_009654  Mmwyl1_4148  inosine-5'-monophosphate dehydrogenase  62.37 
 
 
488 aa  614  9.999999999999999e-175  Marinomonas sp. MWYL1  Bacteria  normal  0.0201579  normal  0.112689 
 
 
-
 
NC_009675  Anae109_1524  inosine-5'-monophosphate dehydrogenase  61.7 
 
 
487 aa  612  9.999999999999999e-175  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0296  inosine 5'-monophosphate dehydrogenase  60.25 
 
 
489 aa  612  9.999999999999999e-175  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_15310  inosine 5'-monophosphate dehydrogenase  66.26 
 
 
489 aa  612  9.999999999999999e-175  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.10306  hitchhiker  4.2499e-17 
 
 
-
 
NC_004347  SO_3293  inosine 5'-monophosphate dehydrogenase  60.94 
 
 
488 aa  609  1e-173  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011891  A2cp1_1615  inosine-5'-monophosphate dehydrogenase  60.87 
 
 
487 aa  608  1e-173  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1520  inosine-5'-monophosphate dehydrogenase  60.87 
 
 
487 aa  608  1e-173  Anaeromyxobacter sp. K  Bacteria  normal  0.0307442  n/a   
 
 
-
 
NC_007760  Adeh_2349  inosine-5'-monophosphate dehydrogenase  60.66 
 
 
487 aa  608  1e-173  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.163967  n/a   
 
 
-
 
NC_008577  Shewana3_1235  inosine 5'-monophosphate dehydrogenase  60.94 
 
 
488 aa  608  1e-173  Shewanella sp. ANA-3  Bacteria  normal  0.916768  normal 
 
 
-
 
NC_003910  CPS_4242  inosine 5'-monophosphate dehydrogenase  62.04 
 
 
490 aa  604  9.999999999999999e-173  Colwellia psychrerythraea 34H  Bacteria  normal  0.953996  n/a   
 
 
-
 
NC_009052  Sbal_2984  inosine 5'-monophosphate dehydrogenase  60.74 
 
 
488 aa  605  9.999999999999999e-173  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2999  inosine 5'-monophosphate dehydrogenase  60.74 
 
 
488 aa  605  9.999999999999999e-173  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2646  inosine 5'-monophosphate dehydrogenase  60.74 
 
 
488 aa  606  9.999999999999999e-173  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1260  inosine-5'-monophosphate dehydrogenase  59.23 
 
 
499 aa  605  9.999999999999999e-173  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.334206 
 
 
-
 
NC_009997  Sbal195_3142  inosine 5'-monophosphate dehydrogenase  60.74 
 
 
488 aa  605  9.999999999999999e-173  Shewanella baltica OS195  Bacteria  normal  normal  0.269643 
 
 
-
 
NC_008321  Shewmr4_1234  inosine 5'-monophosphate dehydrogenase  60.94 
 
 
488 aa  607  9.999999999999999e-173  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1305  inosine 5'-monophosphate dehydrogenase  60.94 
 
 
488 aa  607  9.999999999999999e-173  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2359  inosine 5'-monophosphate dehydrogenase  61.48 
 
 
488 aa  605  9.999999999999999e-173  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.885257 
 
 
-
 
NC_011663  Sbal223_1379  inosine 5'-monophosphate dehydrogenase  60.53 
 
 
488 aa  602  1.0000000000000001e-171  Shewanella baltica OS223  Bacteria  normal  0.281369  normal 
 
 
-
 
NC_002939  GSU2195  inosine-5'-monophosphate dehydrogenase  61.27 
 
 
491 aa  603  1.0000000000000001e-171  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1639  inosine-5'-monophosphate dehydrogenase  58.14 
 
 
488 aa  601  1.0000000000000001e-171  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.0762082  n/a   
 
 
-
 
NC_007498  Pcar_1217  inosine-5'-monophosphate dehydrogenase  59.5 
 
 
491 aa  603  1.0000000000000001e-171  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1269  inosine 5'-monophosphate dehydrogenase  60.53 
 
 
488 aa  601  1.0000000000000001e-171  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000336634  n/a   
 
 
-
 
NC_010506  Swoo_1559  inosine 5'-monophosphate dehydrogenase  59.27 
 
 
490 aa  601  1.0000000000000001e-171  Shewanella woodyi ATCC 51908  Bacteria  normal  0.554921  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>