22 homologs were found in PanDaTox collection
for query gene Mpal_0584 on replicon NC_011832
Organism: Methanosphaerula palustris E1-9c



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011832  Mpal_0584  transcriptional regulator, TrmB  100 
 
 
131 aa  263  8.999999999999999e-70  Methanosphaerula palustris E1-9c  Archaea  decreased coverage  0.0000212991  normal  0.151075 
 
 
-
 
NC_009712  Mboo_1131  transcriptional regulator, TrmB  63.41 
 
 
129 aa  164  2.9999999999999998e-40  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0618637  normal 
 
 
-
 
NC_009712  Mboo_0917  transcriptional regulator, TrmB  65.04 
 
 
124 aa  164  2.9999999999999998e-40  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.000000063679  hitchhiker  0.000000000488515 
 
 
-
 
NC_009051  Memar_1387  transcriptional regulator, TrmB  58.87 
 
 
126 aa  152  1e-36  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_1859  hypothetical protein  48.39 
 
 
124 aa  120  7e-27  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0870058  normal  0.527414 
 
 
-
 
NC_008553  Mthe_0982  hypothetical protein  44.26 
 
 
138 aa  112  1.0000000000000001e-24  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_008553  Mthe_0889  transcriptional regulator, TrmB  48.67 
 
 
130 aa  109  1.0000000000000001e-23  Methanosaeta thermophila PT  Archaea  normal  0.119653  n/a   
 
 
-
 
NC_008553  Mthe_0404  hypothetical protein  43.31 
 
 
129 aa  108  4.0000000000000004e-23  Methanosaeta thermophila PT  Archaea  unclonable  0.000000000144174  n/a   
 
 
-
 
NC_008553  Mthe_0388  hypothetical protein  41.13 
 
 
126 aa  103  6e-22  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_0378  hypothetical protein  44.04 
 
 
124 aa  94.7  3e-19  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.0000000129839  n/a   
 
 
-
 
NC_007796  Mhun_0575  hypothetical protein  38.02 
 
 
129 aa  92.8  1e-18  Methanospirillum hungatei JF-1  Archaea  normal  0.14645  normal 
 
 
-
 
NC_013926  Aboo_0547  transcriptional regulator, TrmB  39.47 
 
 
120 aa  90.1  9e-18  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A3549  hypothetical protein  33.59 
 
 
132 aa  89.4  1e-17  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.000882166  normal  0.578454 
 
 
-
 
NC_007355  Mbar_A3027  hypothetical protein  34.35 
 
 
132 aa  87.4  6e-17  Methanosarcina barkeri str. Fusaro  Archaea  decreased coverage  0.00669531  normal  0.374075 
 
 
-
 
NC_007955  Mbur_2262  hypothetical protein  41.07 
 
 
116 aa  85.9  2e-16  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_0588  hypothetical protein  36.84 
 
 
132 aa  84.7  4e-16  Methanospirillum hungatei JF-1  Archaea  normal  0.490183  normal 
 
 
-
 
NC_007796  Mhun_0497  hypothetical protein  40 
 
 
130 aa  83.2  0.000000000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.057831  normal  0.47226 
 
 
-
 
NC_007355  Mbar_A1949  hypothetical protein  37.5 
 
 
137 aa  82  0.000000000000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A2849  hypothetical protein  42.72 
 
 
129 aa  78.6  0.00000000000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0489802  hitchhiker  0.00628176 
 
 
-
 
NC_007355  Mbar_A1951  hypothetical protein  41.44 
 
 
133 aa  77.8  0.00000000000005  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007796  Mhun_0777  hypothetical protein  37.27 
 
 
128 aa  72.8  0.000000000002  Methanospirillum hungatei JF-1  Archaea  normal  0.572189  normal  0.185879 
 
 
-
 
NC_007955  Mbur_1686  hypothetical protein  35.9 
 
 
121 aa  71.6  0.000000000003  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
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