More than 300 homologs were found in PanDaTox collection
for query gene Mnod_7057 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_7057  Extracellular ligand-binding receptor  100 
 
 
420 aa  858    Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6250  ABC transporter substrate-binding protein  91.6 
 
 
413 aa  729    Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0435582 
 
 
-
 
NC_011894  Mnod_3421  ABC transporter substrate-binding protein  65.87 
 
 
406 aa  521  1e-146  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6215  putative ABC branched-chain amino transporter, periplasmic binding protein  65.35 
 
 
403 aa  513  1e-144  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.947625  normal 
 
 
-
 
NC_009717  Xaut_5024  extracellular ligand-binding receptor  60.69 
 
 
400 aa  496  1e-139  Xanthobacter autotrophicus Py2  Bacteria  normal  0.151241  normal 
 
 
-
 
NC_011894  Mnod_5117  putative UreA/short-chain amide ABC transporter  60.24 
 
 
404 aa  482  1e-135  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_5530  putative ABC branched-chain amino transporter, periplasmic binding protein  59.48 
 
 
401 aa  482  1e-135  Methylobacterium sp. 4-46  Bacteria  normal  0.460998  normal 
 
 
-
 
NC_010511  M446_1790  Leu/Ile/Val-binding family protein  58.82 
 
 
417 aa  476  1e-133  Methylobacterium sp. 4-46  Bacteria  normal  0.322977  normal  0.0207356 
 
 
-
 
NC_010505  Mrad2831_3789  Leu/Ile/Val-binding family protein  57.84 
 
 
409 aa  475  1e-133  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.710609 
 
 
-
 
NC_004311  BRA0953  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative  59.16 
 
 
401 aa  472  1e-132  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0894  putative branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  59.42 
 
 
401 aa  474  1e-132  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3119  Extracellular ligand-binding receptor  56.72 
 
 
403 aa  473  1e-132  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.741733  n/a   
 
 
-
 
NC_011894  Mnod_0709  Leu/Ile/Val-binding family protein  60.21 
 
 
406 aa  471  1e-132  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.195015  n/a   
 
 
-
 
NC_010511  M446_1336  extracellular ligand-binding receptor  60.8 
 
 
400 aa  472  1e-132  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.116449 
 
 
-
 
NC_011894  Mnod_3279  Extracellular ligand-binding receptor  60.7 
 
 
400 aa  471  1.0000000000000001e-131  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.463071  n/a   
 
 
-
 
NC_009667  Oant_1402  branched-chain amino acid ABC transporter, periplasmic amino acid- binding protein  58.79 
 
 
401 aa  468  9.999999999999999e-131  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3303  amide-urea binding protein  59.42 
 
 
404 aa  464  9.999999999999999e-131  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.219547  n/a   
 
 
-
 
NC_007964  Nham_1674  ABC transporter substrate-binding protein  59.59 
 
 
409 aa  465  9.999999999999999e-131  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1936  extracellular ligand-binding receptor  60.43 
 
 
409 aa  467  9.999999999999999e-131  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0141282 
 
 
-
 
NC_011894  Mnod_4450  Extracellular ligand-binding receptor  62.3 
 
 
401 aa  467  9.999999999999999e-131  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.378958  n/a   
 
 
-
 
NC_010505  Mrad2831_4022  extracellular ligand-binding receptor  56.86 
 
 
404 aa  462  1e-129  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.339015  normal  0.405471 
 
 
-
 
NC_012858  Rleg_6729  Extracellular ligand-binding receptor  57.92 
 
 
401 aa  464  1e-129  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5823  putative branched-chain amino acid ABC transporter, substrate-binding protein  60.37 
 
 
401 aa  464  1e-129  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.281514  normal  0.102648 
 
 
-
 
NC_007778  RPB_3199  extracellular ligand-binding receptor  55.53 
 
 
405 aa  464  1e-129  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.206752  normal  0.636131 
 
 
-
 
NC_010511  M446_3244  extracellular ligand-binding receptor  61.76 
 
 
401 aa  464  1e-129  Methylobacterium sp. 4-46  Bacteria  normal  0.114685  normal  0.545433 
 
 
-
 
NC_011004  Rpal_2487  Extracellular ligand-binding receptor  56.36 
 
 
404 aa  462  1e-129  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.589907  n/a   
 
 
-
 
NC_009636  Smed_2864  putative periplasmic binding ABC transporter protein  57.32 
 
 
401 aa  459  9.999999999999999e-129  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.581336 
 
 
-
 
NC_007958  RPD_2256  extracellular ligand-binding receptor  56.53 
 
 
403 aa  458  9.999999999999999e-129  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.777349  normal  0.277076 
 
 
-
 
NC_010511  M446_3023  putative UreA/short-chain amide ABC transporter  62.17 
 
 
406 aa  459  9.999999999999999e-129  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.040363 
 
 
-
 
NC_008686  Pden_1717  ABC branched-chain amino acid transporter, periplasmic binding protein  56.05 
 
 
399 aa  459  9.999999999999999e-129  Paracoccus denitrificans PD1222  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_009485  BBta_0682  putative branched chain amino acid binding protein  57 
 
 
395 aa  456  1e-127  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.246685  normal  0.442954 
 
 
-
 
NC_010505  Mrad2831_0329  putative ABC transport protein substrate-binding component  57.29 
 
 
405 aa  455  1e-127  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.42175  normal 
 
 
-
 
NC_010505  Mrad2831_0057  extracellular ligand-binding receptor  57 
 
 
405 aa  456  1e-127  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.652717  normal 
 
 
-
 
NC_009485  BBta_5091  putative branched-chain amino acid ABC transporter, substrate-binding protein  56.3 
 
 
416 aa  455  1e-127  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.339692  normal  0.603773 
 
 
-
 
NC_007494  RSP_3297  ABC branched-chain amino acid transporter, periplasmic binding protein  58.73 
 
 
400 aa  454  1.0000000000000001e-126  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.300791  n/a   
 
 
-
 
NC_009429  Rsph17025_3292  hypothetical protein  58.99 
 
 
400 aa  453  1.0000000000000001e-126  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.406168  normal 
 
 
-
 
NC_009050  Rsph17029_4029  ABC branched-chain amino acid transporter, periplasmic binding protein  58.47 
 
 
400 aa  452  1.0000000000000001e-126  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_1437  extracellular ligand-binding receptor  59.2 
 
 
401 aa  449  1e-125  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.694305 
 
 
-
 
NC_007973  Rmet_1640  putative UreA/short-chain amide ABC transporter  54.86 
 
 
412 aa  450  1e-125  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000640664  normal 
 
 
-
 
NC_011894  Mnod_4449  Extracellular ligand-binding receptor  57.71 
 
 
416 aa  447  1.0000000000000001e-124  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.29774  n/a   
 
 
-
 
NC_009720  Xaut_4079  ABC-type branched-chain amino acid transport system, periplasmic component  54.81 
 
 
405 aa  446  1.0000000000000001e-124  Xanthobacter autotrophicus Py2  Bacteria  normal  0.23084  normal 
 
 
-
 
NC_007958  RPD_0275  putative ureA/short-chain amide ABC transporter  56.11 
 
 
401 aa  446  1.0000000000000001e-124  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.325884 
 
 
-
 
NC_011662  Tmz1t_1377  ABC transporter substrate-binding protein  53.47 
 
 
404 aa  441  1e-123  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4670  putative ABC transporter, substrate-binding protein  54.55 
 
 
403 aa  442  1e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0554  ureA/short-chain amide ABC transporter  54.77 
 
 
402 aa  444  1e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.930825  normal  0.0786148 
 
 
-
 
NC_007925  RPC_0074  putative branched chain amino acid periplasmic binding protein of ABC transporter  58.71 
 
 
399 aa  442  1e-123  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3229  putative ABC branched-chain amino transporter, periplasmic binding protein  60.21 
 
 
412 aa  441  1e-123  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6432  extracellular ligand-binding receptor  56.32 
 
 
407 aa  438  9.999999999999999e-123  Ralstonia eutropha JMP134  Bacteria  hitchhiker  0.00470186  n/a   
 
 
-
 
NC_007348  Reut_B3887  ureA/short-chain amide ABC transporter  53.56 
 
 
413 aa  439  9.999999999999999e-123  Ralstonia eutropha JMP134  Bacteria  normal  0.0891482  n/a   
 
 
-
 
NC_007778  RPB_1152  UreA/short-chain amide ABC transporter  54.57 
 
 
415 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.471291  normal  0.323569 
 
 
-
 
NC_011004  Rpal_5300  putative periplasmic substrate binding protein  58.71 
 
 
397 aa  440  9.999999999999999e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.401613  n/a   
 
 
-
 
NC_009720  Xaut_1298  putative ABC branched-chain amino transporter, periplasmic binding protein  54.47 
 
 
419 aa  441  9.999999999999999e-123  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4690  extracellular ligand-binding receptor  57.43 
 
 
397 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1850  putative ABC transporter, substrate binding protein  57.26 
 
 
402 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.164156  n/a   
 
 
-
 
NC_009720  Xaut_3348  extracellular ligand-binding receptor  55.94 
 
 
403 aa  441  9.999999999999999e-123  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.164921 
 
 
-
 
NC_011892  Mnod_8470  ABC-type branched-chain amino acid transport systems, periplasmic component  52.7 
 
 
411 aa  439  9.999999999999999e-123  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.481667  n/a   
 
 
-
 
NC_011004  Rpal_0486  substrate-binding protein  57.37 
 
 
401 aa  439  9.999999999999999e-123  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1254  ABC-type branched-chain amino acid transport systems, periplasmic component  55.61 
 
 
427 aa  441  9.999999999999999e-123  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.946675 
 
 
-
 
NC_009720  Xaut_1578  ABC transporter substrate-binding protein  56.7 
 
 
402 aa  440  9.999999999999999e-123  Xanthobacter autotrophicus Py2  Bacteria  normal  0.803505  normal 
 
 
-
 
NC_007958  RPD_4400  putative branched chain amino acid periplasmic binding protein of ABC transporter  58.45 
 
 
397 aa  440  9.999999999999999e-123  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2526  ABC transporter substrate-binding protein  57.37 
 
 
411 aa  439  9.999999999999999e-123  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.779779  n/a   
 
 
-
 
NC_010524  Lcho_3593  putative ABC transporter substrate binding protein  55.38 
 
 
403 aa  441  9.999999999999999e-123  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.636574 
 
 
-
 
NC_007778  RPB_3877  urea/short-chain binding protein of ABC transporter  54.61 
 
 
406 aa  436  1e-121  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.188449  normal 
 
 
-
 
NC_009485  BBta_7539  putative ABC transporter (substrate binding protein)  58.45 
 
 
394 aa  437  1e-121  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0807  extracellular ligand-binding receptor  54.81 
 
 
402 aa  433  1e-120  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.329195  n/a   
 
 
-
 
NC_010511  M446_5073  putative substrate-binding protein  54.46 
 
 
410 aa  432  1e-120  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.210468 
 
 
-
 
NC_009485  BBta_3757  ABC transporter substrate-binding protein  51.19 
 
 
409 aa  429  1e-119  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6351  putative branched-chain amino acid ABC transporter, substrate-binding protein  55.67 
 
 
403 aa  429  1e-119  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.182816 
 
 
-
 
NC_007958  RPD_1473  putative urea/short-chain binding protein of ABC transporter  54.88 
 
 
406 aa  430  1e-119  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.267716  normal 
 
 
-
 
NC_011894  Mnod_1194  putative ABC branched-chain amino transporter, periplasmic binding protein  55.2 
 
 
405 aa  431  1e-119  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2137  ABC branched-chain amino acid transporter, periplasmic ligand biinding protein  55.53 
 
 
404 aa  425  1e-118  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3779  putative ABC transporter, substrate binding protein  56.58 
 
 
408 aa  426  1e-118  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3122  Extracellular ligand-binding receptor  51.69 
 
 
419 aa  426  1e-118  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3282  Extracellular ligand-binding receptor  55.17 
 
 
408 aa  426  1e-118  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0100489  n/a   
 
 
-
 
NC_010002  Daci_0182  extracellular ligand-binding receptor  51.21 
 
 
413 aa  427  1e-118  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6461  Extracellular ligand-binding receptor  52.26 
 
 
402 aa  424  1e-117  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3503  putative ABC transporter, substrate binding protein  54.78 
 
 
408 aa  422  1e-117  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.10294  n/a   
 
 
-
 
NC_011891  A2cp1_1820  Extracellular ligand-binding receptor  55.53 
 
 
404 aa  424  1e-117  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1339  ABC transporter substrate binding protein  56.15 
 
 
412 aa  421  1e-116  Methylobacterium sp. 4-46  Bacteria  normal  0.358784  normal  0.213428 
 
 
-
 
NC_007925  RPC_2953  ABC transporter substrate-binding protein  56.49 
 
 
408 aa  419  1e-116  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.137688  normal 
 
 
-
 
NC_007958  RPD_2475  ABC-type branched-chain amino acid transport systems, periplasmic component  52.26 
 
 
405 aa  421  1e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.25109 
 
 
-
 
NC_007958  RPD_2999  putative urea/short-chain binding protein of ABC transporter  54.52 
 
 
408 aa  418  1e-116  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0873398  normal  0.403324 
 
 
-
 
NC_007778  RPB_2450  urea/short-chain binding protein of ABC transporter  55.53 
 
 
408 aa  415  9.999999999999999e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.045034  normal  0.258523 
 
 
-
 
NC_010623  Bphy_4932  extracellular ligand-binding receptor  50.61 
 
 
409 aa  415  9.999999999999999e-116  Burkholderia phymatum STM815  Bacteria  normal  0.350034  normal 
 
 
-
 
NC_009675  Anae109_1677  ABC branched-chain amino acid transporter, periplasmic ligand biinding protein  52.89 
 
 
404 aa  410  1e-113  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0008  Extracellular ligand-binding receptor  51.56 
 
 
408 aa  407  1.0000000000000001e-112  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0278078 
 
 
-
 
NC_011894  Mnod_1190  putative ABC branched-chain amino transporter, periplasmic binding protein  50.76 
 
 
401 aa  406  1.0000000000000001e-112  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.402198  n/a   
 
 
-
 
NC_011894  Mnod_0969  UreA/short-chain binding protein of ABC transporter  52.14 
 
 
405 aa  406  1.0000000000000001e-112  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.736695  n/a   
 
 
-
 
NC_003295  RSc3342  putative substrate-binding periplasmic (PBP) ABC transporter protein  49.88 
 
 
402 aa  404  1e-111  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3891  extracellular ligand-binding receptor  51.24 
 
 
406 aa  403  1e-111  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3783  ABC transporter substrate-binding protein  52.01 
 
 
405 aa  402  1e-111  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0659  putative substrate-binding protein  51.81 
 
 
412 aa  404  1e-111  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C5957  extracellular ligand-binding receptor  49.74 
 
 
409 aa  399  9.999999999999999e-111  Ralstonia eutropha JMP134  Bacteria  normal  0.0908104  n/a   
 
 
-
 
NC_007651  BTH_I3329  branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein  52.16 
 
 
398 aa  399  9.999999999999999e-111  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1607  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  52.3 
 
 
392 aa  399  9.999999999999999e-111  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2530  putative ABC branched-chain amino transporter, periplasmic binding protein  53.51 
 
 
402 aa  400  9.999999999999999e-111  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_4065  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  52.49 
 
 
398 aa  398  1e-109  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3913  Extracellular ligand-binding receptor  49.88 
 
 
404 aa  398  1e-109  Burkholderia phytofirmans PsJN  Bacteria  normal  0.956199  normal 
 
 
-
 
NC_008785  BMASAVP1_A3375  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  52.49 
 
 
398 aa  398  1e-109  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0019  branched chain amino acid ABC transporter periplasmic ligand-binding protein  49.63 
 
 
404 aa  397  1e-109  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
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