12 homologs were found in PanDaTox collection
for query gene Mnod_5399 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_5399  putative PAS/PAC sensor protein  100 
 
 		 74 aa  148  3e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686333  n/a   
 
 
-
 
NC_010172  Mext_2449  hypothetical protein  38.98 
 
 		 88 aa  47.4  0.00006  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_3594  putative PAS/PAC sensor protein  35.38 
 
 		 361 aa  45.8  0.0002  Methylobacterium populi BJ001  Bacteria  normal  0.419361  normal  0.346038 
 
 
-
 
NC_007643  Rru_A2280  hypothetical protein  36.92 
 
 		 75 aa  44.3  0.0006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_0293  hypothetical protein  37.84 
 
 		 84 aa  44.3  0.0007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  0.770993 
 
 
-
 
NC_012850  Rleg_0324  hypothetical protein  36.11 
 
 		 99 aa  42.7  0.002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.929331 
 
 
-
 
NC_009621  Smed_5419  hypothetical protein  34.25 
 
 		 82 aa  42  0.003  Sinorhizobium medicae WSM419  Bacteria  normal  0.277683  normal  0.663119 
 
 
-
 
NC_010507  Mrad2831_6546  XRE family transcriptional regulator  37.88 
 
 		 79 aa  41.6  0.004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.188635  n/a   
 
 
-
 
NC_011888  Mnod_7736  transcriptional regulator, XRE family  40.98 
 
 		 86 aa  41.6  0.004  Methylobacterium nodulans ORS 2060  Bacteria  n/a    n/a   
 
 
-
 
NC_012858  Rleg_6881  transcriptional regulator, XRE family  42.62 
 
 		 106 aa  41.6  0.004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.879707  normal  0.858405 
 
 
-
 
NC_010505  Mrad2831_1230  helix-turn-helix domain-containing protein  36.36 
 
 		 85 aa  40.4  0.008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010338  Caul_4671  hypothetical protein  38.33 
 
 		 87 aa  40  0.01  Caulobacter sp. K31  Bacteria  normal  1  normal  1 
 
 
-
 
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