48 homologs were found in PanDaTox collection
for query gene Mnod_3357 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_3357  transcriptional regulator, PaaX family  100 
 
 		 301 aa  593  1e-169  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4146  PaaX family transcriptional regulator  49.14 
 
 		 305 aa  251  1e-65  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.85173 
 
 
-
 
NC_008688  Pden_4812  PaaX domain-containing protein  45.14 
 
 		 284 aa  186  3e-46  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  0.33483 
 
 
-
 
NC_009485  BBta_2864  phenylacetic acid degradation operon negative regulatory protein paaX  35.71 
 
 		 293 aa  157  3e-37  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00499823  normal  0.0484276 
 
 
-
 
NC_009654  Mmwyl1_3103  PaaX family transcriptional regulator  31.67 
 
 		 307 aa  155  8e-37  Marinomonas sp. MWYL1  Bacteria  decreased coverage  0.000000661945  decreased coverage  0.0000397547 
 
 
-
 
NC_010322  PputGB1_2610  PaaX family transcriptional regulator  34.33 
 
 		 334 aa  151  1e-35  Pseudomonas putida GB-1  Bacteria  normal  0.218497  normal  0.0704814 
 
 
-
 
NC_002947  PP_3286  PaaX family transcriptional regulator  33.33 
 
 		 307 aa  150  2e-35  Pseudomonas putida KT2440  Bacteria  normal  0.17765  normal  1 
 
 
-
 
NC_011894  Mnod_7200  transcriptional regulator, PaaX family  39.02 
 
 		 292 aa  150  2e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.803046  n/a   
 
 
-
 
NC_010501  PputW619_2623  PaaX family transcriptional regulator  34.55 
 
 		 334 aa  149  5e-35  Pseudomonas putida W619  Bacteria  normal  0.312733  normal  0.0873289 
 
 
-
 
NC_007298  Daro_0386  phenylacetic acid degradation operon negative regulatory protein PaaX  33.66 
 
 		 352 aa  148  1.0000000000000001e-34  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000187716  normal  0.0170462 
 
 
-
 
NC_009512  Pput_2473  PaaX family transcriptional regulator  33.89 
 
 		 334 aa  147  2.0000000000000003e-34  Pseudomonas putida F1  Bacteria  normal  0.303711  normal  1 
 
 
-
 
NC_009720  Xaut_0895  PaaX family transcriptional regulator  33.95 
 
 		 305 aa  144  2e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  0.947925  normal  1 
 
 
-
 
NC_007925  RPC_0692  phenylacetic acid degradation operon negative regulatory protein PaaX  32.62 
 
 		 287 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.717402  normal  1 
 
 
-
 
NC_010506  Swoo_0216  PaaX family transcriptional regulator  31.79 
 
 		 311 aa  130  4.0000000000000003e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0165647 
 
 
-
 
NC_009801  EcE24377A_1585  phenylacetic acid degradation operon negative regulatory protein PaaX  31.32 
 
 		 316 aa  125  7e-28  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_2246  transcriptional regulator, PaaX family  30.85 
 
 		 316 aa  125  1e-27  Escherichia coli DH1  Bacteria  normal  0.218129  n/a   
 
 
-
 
NC_007958  RPD_1521  phenylacetic acid degradation operon negative regulatory protein PaaX  30.8 
 
 		 312 aa  124  2e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010468  EcolC_2256  PaaX family transcriptional regulator  30.85 
 
 		 316 aa  123  3e-27  Escherichia coli ATCC 8739  Bacteria  normal  0.203735  normal  1 
 
 
-
 
NC_009800  EcHS_A1486  phenylacetic acid degradation operon negative regulatory protein PaaX  30.85 
 
 		 316 aa  123  3e-27  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_3083  PaaX family transcriptional regulator  30 
 
 		 312 aa  121  9.999999999999999e-27  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.415086 
 
 
-
 
NC_009484  Acry_0094  PaaX family transcriptional regulator  36.68 
 
 		 289 aa  119  3.9999999999999996e-26  Acidiphilium cryptum JF-5  Bacteria  normal  0.339453  n/a   
 
 
-
 
NC_011662  Tmz1t_0196  transcriptional regulator, PaaX family  31.51 
 
 		 319 aa  119  7.999999999999999e-26  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_1514  transcriptional regulator, PaaX family  31.27 
 
 		 316 aa  117  1.9999999999999998e-25  Thauera sp. MZ1T  Bacteria  normal  0.139923  n/a   
 
 
-
 
NC_007348  Reut_B3734  phenylacetic acid degradation operon negative regulatory protein PaaX  31.44 
 
 		 307 aa  114  2.0000000000000002e-24  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_2859  transcriptional regulator, PaaX family  26.67 
 
 		 285 aa  101  1e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008709  Ping_0661  PaaX domain-containing protein, C- domain  23.34 
 
 		 285 aa  95.9  7e-19  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_0708  PaaX family transcriptional regulator  32.97 
 
 		 272 aa  86.3  6e-16  Salinispora tropica CNB-440  Bacteria  normal  0.719013  normal  0.640912 
 
 
-
 
NC_009953  Sare_0655  PaaX family transcriptional regulator  31.32 
 
 		 272 aa  81.6  0.00000000000002  Salinispora arenicola CNS-205  Bacteria  normal  0.0748596  hitchhiker  0.00291671 
 
 
-
 
NC_013131  Caci_2009  transcriptional regulator, PaaX family  29.55 
 
 		 281 aa  79  0.00000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.429433  normal  1 
 
 
-
 
NC_013411  GYMC61_2835  transcriptional regulator, PaaX family  22.9 
 
 		 285 aa  76.3  0.0000000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_2150  transcriptional regulator, PaaX family  28.68 
 
 		 289 aa  70.9  0.00000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.933136  normal  0.276366 
 
 
-
 
NC_013947  Snas_0703  transcriptional regulator, PaaX family  29.17 
 
 		 259 aa  70.1  0.00000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_2629  PaaX family transcriptional regulator  28.04 
 
 		 259 aa  69.3  0.00000000008  Meiothermus ruber DSM 1279  Bacteria  normal  0.495501  normal  1 
 
 
-
 
NC_008699  Noca_1206  PaaX domain-containing protein, C- domain  29.12 
 
 		 258 aa  67.4  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_0294  transcriptional regulator, PaaX family  30.31 
 
 		 318 aa  66.6  0.0000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0429653  hitchhiker  0.0000864342 
 
 
-
 
NC_013595  Sros_8420  putative transcriptional regulator, PaaX family  29.12 
 
 		 260 aa  65.5  0.0000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.289328  normal  1 
 
 
-
 
NC_014212  Mesil_0980  transcriptional regulator, PaaX family  42.03 
 
 		 259 aa  60.5  0.00000004  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.148761 
 
 
-
 
NC_013093  Amir_0787  transcriptional regulator, PaaX family  30.74 
 
 		 268 aa  59.7  0.00000006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_0309  transcriptional regulator, PaaX family  28.4 
 
 		 302 aa  59.3  0.00000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_0588  transcriptional regulator, PaaX family  25.57 
 
 		 276 aa  58.9  0.0000001  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009956  Dshi_3828  PaaX family transcriptional regulator  27.12 
 
 		 264 aa  57.8  0.0000002  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.648927  normal  1 
 
 
-
 
NC_013947  Snas_6455  transcriptional regulator, PaaX family  28.16 
 
 		 260 aa  55.8  0.0000007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0436  PaaX-like  26.36 
 
 		 301 aa  55.8  0.0000009  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.581976 
 
 
-
 
NC_013131  Caci_4899  transcriptional regulator, PaaX family  27.06 
 
 		 276 aa  55.5  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.425131  normal  1 
 
 
-
 
NC_013159  Svir_19070  phenylacetic acid-responsive transcriptional repressor  27.07 
 
 		 292 aa  53.9  0.000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0202563  normal  1 
 
 
-
 
NC_014165  Tbis_1609  PaaX family transcriptional regulator  28.57 
 
 		 258 aa  50.8  0.00003  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_5523  transcriptional regulator, PaaX family  27.31 
 
 		 267 aa  45.4  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.543092 
 
 
-
 
NC_009921  Franean1_1685  PaaX family transcriptional regulator  22.26 
 
 		 333 aa  44.3  0.003  Frankia sp. EAN1pec  Bacteria  normal  0.0710641  normal  0.260669 
 
 
-
 
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