28 homologs were found in PanDaTox collection
for query gene Mmcs_1229 on replicon NC_008146
Organism: Mycobacterium sp. MCS



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008146  Mmcs_1229  succinate dehydrogenase subunit D  100 
 
 		 159 aa  324  3e-88  Mycobacterium sp. MCS  Bacteria  normal  0.510568  n/a   
 
 
-
 
NC_008705  Mkms_1246  succinate dehydrogenase subunit D  100 
 
 		 159 aa  324  3e-88  Mycobacterium sp. KMS  Bacteria  normal  0.127095  normal  1 
 
 
-
 
NC_009077  Mjls_1255  succinate dehydrogenase subunit D  99.37 
 
 		 159 aa  322  1e-87  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1588  putative succinate dehydrogenase  87.18 
 
 		 163 aa  274  3e-73  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.955713  normal  0.505457 
 
 
-
 
NC_009338  Mflv_4845  putative succinate dehydrogenase  86.54 
 
 		 167 aa  270  7e-72  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009565  TBFG_13348  succinate dehydrogenase hydrophobic membrane anchor subunit sdhD  83.8 
 
 		 144 aa  235  2e-61  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.258133 
 
 
-
 
NC_013441  Gbro_1777  Succinate dehydrogenase hydrophobic anchor subunit-like protein  65.71 
 
 		 153 aa  194  3e-49  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0966  succinate dehydrogenase cytochrome b subunit  66.19 
 
 		 155 aa  189  1e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.151331  n/a   
 
 
-
 
NC_013093  Amir_6463  Succinate dehydrogenase hydrophobic anchor subunit-like protein  66.09 
 
 		 138 aa  163  8e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3953  Succinate dehydrogenase hydrophobic anchor subunit-like  52.14 
 
 		 169 aa  156  9e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.0138946 
 
 
-
 
NC_013159  Svir_05370  succinate dehydrogenase subunit D  65.79 
 
 		 138 aa  149  2e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.381398  normal  1 
 
 
-
 
NC_011886  Achl_1203  putative succinate dehydrogenase, membrane subunit (SdhD)  56.56 
 
 		 153 aa  145  2.0000000000000003e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000167837 
 
 
-
 
NC_013530  Xcel_0989  Succinate dehydrogenase hydrophobic anchor subunit-like protein  52.76 
 
 		 155 aa  144  3e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0299411  n/a   
 
 
-
 
NC_008541  Arth_1130  succinate dehydrogenase subunit D  50.36 
 
 		 164 aa  144  7.0000000000000006e-34  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_1016  succinate dehydrogenase hydrophobic anchor subunit-like protein  51.88 
 
 		 152 aa  142  2e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0771  succinate dehydrogenase hydrophobic membrane anchor protein  59.13 
 
 		 151 aa  142  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.199675 
 
 
-
 
NC_013174  Jden_0820  Succinate dehydrogenase hydrophobic anchor subunit-like protein  53.91 
 
 		 146 aa  139  9.999999999999999e-33  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_1310  Succinate dehydrogenase hydrophobic anchor subunit-like protein  59.38 
 
 		 143 aa  134  5e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  0.419082  normal  0.999536 
 
 
-
 
NC_013521  Sked_25810  succinate dehydrogenase subunit D  48.06 
 
 		 151 aa  132  1.9999999999999998e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.297641  normal  0.918688 
 
 
-
 
NC_007777  Francci3_0680  succinate dehydrogenase subunit D  53.59 
 
 		 153 aa  131  3.9999999999999996e-30  Frankia sp. CcI3  Bacteria  normal  0.222986  normal  0.0344179 
 
 
-
 
NC_012803  Mlut_04840  succinate dehydrogenase subunit D  49.59 
 
 		 159 aa  131  3.9999999999999996e-30  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_21320  succinate dehydrogenase subunit D  49.22 
 
 		 150 aa  126  1.0000000000000001e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_2951  succinate dehydrogenase cytochrome b556 subunit  52.76 
 
 		 152 aa  120  6e-27  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  decreased coverage  0.000110857 
 
 
-
 
NC_013525  Tter_0786  Succinate dehydrogenase hydrophobic anchor subunit-like protein  47.29 
 
 		 126 aa  105  3e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014212  Mesil_1436  succinate dehydrogenase, membrane subunit (SdhD)  38.33 
 
 		 130 aa  79.7  0.00000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.269065  normal  1 
 
 
-
 
NC_013124  Afer_0187  succinate dehydrogenase subunit D  47.54 
 
 		 125 aa  78.2  0.00000000000004  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0888  succinate dehydrogenase, cytochrome b subunit  34.43 
 
 		 125 aa  72.4  0.000000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.909665  normal  0.65854 
 
 
-
 
NC_011059  Paes_2256  succinate dehydrogenase, membrane subunit, putative  25.47 
 
 		 165 aa  46.6  0.0002  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0904861  normal  1 
 
 
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