15 homologs were found in PanDaTox collection
for query gene Mmc1_2988 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_2988  hemolysin-type calcium-binding region  100 
 
 
4519 aa  8256    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2989  hemolysin-type calcium-binding region  88.46 
 
 
2469 aa  2924    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0876  hypothetical protein  35.01 
 
 
1121 aa  132  2.0000000000000002e-28  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.728524 
 
 
-
 
NC_009359  OSTLU_24577  predicted protein  24.03 
 
 
1676 aa  68.2  0.000000004  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.0561517  normal  0.0448283 
 
 
-
 
NC_009428  Rsph17025_2424  glycoside hydrolase family protein  51.56 
 
 
467 aa  52.4  0.0002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.443188 
 
 
-
 
NC_012792  Vapar_5959  outer membrane adhesin like proteiin  38.78 
 
 
2567 aa  51.6  0.0003  Variovorax paradoxus S110  Bacteria  normal  0.33422  n/a   
 
 
-
 
NC_007413  Ava_3265  Ig family protein  50 
 
 
3209 aa  49.3  0.002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.594871  decreased coverage  0.00759247 
 
 
-
 
NC_010001  Cphy_2809  chromosome segregation ATPase-like protein  21.19 
 
 
2228 aa  48.9  0.002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0591  FG-GAP  29.9 
 
 
813 aa  48.5  0.003  Trichodesmium erythraeum IMS101  Bacteria  normal  0.41506  normal 
 
 
-
 
NC_012560  Avin_51170  Secreted mannuronan C-5 epimerase  30.34 
 
 
1839 aa  48.1  0.004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0020  hemolysin-type calcium-binding protein  35.54 
 
 
2890 aa  47.4  0.006  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_13810  Alginate lyase  47.62 
 
 
417 aa  47  0.009  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1113  hemolysin-type calcium-binding region; RTX toxin  54.1 
 
 
437 aa  47  0.01  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0412  beta-Ig-H3/fasciclin  53.62 
 
 
510 aa  46.6  0.01  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.821212  normal 
 
 
-
 
NC_009956  Dshi_3871  RTX toxins and related Ca2+-binding protein-like protein  30.04 
 
 
1164 aa  46.6  0.01  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.318671  normal 
 
 
-
 
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