25 homologs were found in PanDaTox collection
for query gene Mmc1_0100 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_0100  nitrogen regulatory protein P-II  100 
 
 
121 aa  245  1e-64  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0339  nitrogen regulatory protein P-II (GlnB, GlnK)  39.36 
 
 
115 aa  78.2  0.00000000000004  Methanospirillum hungatei JF-1  Archaea  normal  0.180511  normal  0.821107 
 
 
-
 
NC_010424  Daud_0473  nitrogen regulatory protein P-II  36.96 
 
 
117 aa  70.9  0.000000000006  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_0344  nitrogen regulatory protein P-II  34.04 
 
 
126 aa  67.8  0.00000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00681147 
 
 
-
 
NC_008148  Rxyl_3140  nitrogen regulatory protein P-II  32 
 
 
106 aa  67  0.00000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2377  hypothetical protein  32.38 
 
 
374 aa  66.2  0.0000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_0747  nitrogen regulatory protein P-II  40.66 
 
 
122 aa  63.5  0.0000000008  Methanoculleus marisnigri JR1  Archaea  hitchhiker  0.00943314  n/a   
 
 
-
 
NC_010718  Nther_0343  PII family protein  30.43 
 
 
119 aa  59.7  0.00000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00662152 
 
 
-
 
NC_002967  TDE0322  P-II family regulatory protein  33.33 
 
 
99 aa  58.5  0.00000003  Treponema denticola ATCC 35405  Bacteria  normal  0.10652  n/a   
 
 
-
 
NC_011830  Dhaf_1788  nitrogen regulatory protein P-II  32.95 
 
 
103 aa  55.8  0.0000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000022602  n/a   
 
 
-
 
NC_010001  Cphy_2614  nitrogen regulatory protein P-II  31.52 
 
 
221 aa  53.1  0.000001  Clostridium phytofermentans ISDg  Bacteria  normal  0.103962  n/a   
 
 
-
 
NC_011830  Dhaf_1144  nitrogen regulatory protein P-II  29.79 
 
 
221 aa  52.8  0.000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000024925  n/a   
 
 
-
 
NC_010506  Swoo_2760  putative nitrogen regulatory protein P-II  31.07 
 
 
116 aa  51.6  0.000003  Shewanella woodyi ATCC 51908  Bacteria  normal  0.322157  normal  0.0235109 
 
 
-
 
NC_009092  Shew_1499  putative nitrogen regulatory protein P-II  30.1 
 
 
116 aa  50.8  0.000006  Shewanella loihica PV-4  Bacteria  normal  0.689557  normal 
 
 
-
 
NC_011883  Ddes_1465  nitrogen regulatory protein P-II (GlnB, GlnK)  33.33 
 
 
107 aa  50.1  0.00001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1722  nitrogen regulatory protein P-II (GlnB, GlnK)  30.61 
 
 
105 aa  48.1  0.00004  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1828  putative nitrogen regulatory protein P-II  30.39 
 
 
116 aa  47  0.00008  Shewanella sediminis HAW-EB3  Bacteria  normal  0.133078  normal 
 
 
-
 
NC_013456  VEA_004144  nitrogen regulatory protein P-II  32.04 
 
 
116 aa  45.4  0.0003  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0166  hypothetical protein  30.39 
 
 
116 aa  44.7  0.0004  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0909  hypothetical protein  28.21 
 
 
240 aa  44.3  0.0006  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1593  putative nitrogen regulatory protein P-II  29.63 
 
 
116 aa  44.3  0.0006  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0019  P-II family regulatory protein  28.87 
 
 
108 aa  44.3  0.0006  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.0000000000803285  n/a   
 
 
-
 
NC_008345  Sfri_2273  putative nitrogen regulatory protein P-II  29.36 
 
 
116 aa  43.5  0.001  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.000994598  n/a   
 
 
-
 
NC_008709  Ping_1222  putative nitrogen regulatory protein P-II family protein  30.1 
 
 
116 aa  42.7  0.002  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.174539 
 
 
-
 
NC_003910  CPS_1951  hypothetical protein  30.56 
 
 
116 aa  42.4  0.002  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
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