48 homologs were found in PanDaTox collection
for query gene Mflv_5085 on replicon NC_009338
Organism: Mycobacterium gilvum PYR-GCK



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009338  Mflv_5085  PaaX domain-containing protein, C- domain  100 
 
 
244 aa  479  1e-134  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.706044 
 
 
-
 
NC_008726  Mvan_1271  PaaX domain-containing protein, C- domain  80.93 
 
 
237 aa  370  1e-101  Mycobacterium vanbaalenii PYR-1  Bacteria  decreased coverage  0.00141132  normal 
 
 
-
 
NC_008146  Mmcs_0977  PaaX-like protein  70.95 
 
 
243 aa  332  3e-90  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0995  PaaX domain-containing protein, C- domain  70.95 
 
 
243 aa  332  3e-90  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1005  PaaX domain-containing protein, C- domain  70.95 
 
 
243 aa  332  3e-90  Mycobacterium sp. JLS  Bacteria  normal  normal  0.457167 
 
 
-
 
NC_009565  TBFG_10688  hypothetical protein  66.38 
 
 
240 aa  312  2.9999999999999996e-84  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4285  PaaX domain protein protein domain protein  47.64 
 
 
244 aa  195  5.000000000000001e-49  Gordonia bronchialis DSM 43247  Bacteria  normal  0.246767  n/a   
 
 
-
 
NC_013595  Sros_6140  putative transcriptional regulator, PaaX family  46.64 
 
 
251 aa  162  3e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.353105  normal  0.192867 
 
 
-
 
NC_013411  GYMC61_2859  transcriptional regulator, PaaX family  24.81 
 
 
285 aa  76.6  0.0000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_0196  transcriptional regulator, PaaX family  28.96 
 
 
319 aa  67.8  0.0000000002  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1206  PaaX domain-containing protein, C- domain  34.47 
 
 
258 aa  67  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_19070  phenylacetic acid-responsive transcriptional repressor  30.28 
 
 
292 aa  65.9  0.0000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0202563  normal 
 
 
-
 
NC_014165  Tbis_1609  PaaX family transcriptional regulator  28.76 
 
 
258 aa  62.8  0.000000005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0915  PaaX domain-containing protein  31.3 
 
 
275 aa  62.4  0.000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0980  transcriptional regulator, PaaX family  27.35 
 
 
259 aa  62  0.000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.148761 
 
 
-
 
NC_013131  Caci_4899  transcriptional regulator, PaaX family  28.44 
 
 
276 aa  60.1  0.00000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.425131  normal 
 
 
-
 
NC_013947  Snas_6455  transcriptional regulator, PaaX family  31.2 
 
 
260 aa  57.8  0.0000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0787  transcriptional regulator, PaaX family  28.26 
 
 
268 aa  58.2  0.0000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2835  transcriptional regulator, PaaX family  22.81 
 
 
285 aa  57.8  0.0000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_0588  transcriptional regulator, PaaX family  27.8 
 
 
276 aa  57.4  0.0000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3734  phenylacetic acid degradation operon negative regulatory protein PaaX  29.79 
 
 
307 aa  57.4  0.0000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0294  transcriptional regulator, PaaX family  28.63 
 
 
318 aa  56.6  0.0000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0429653  hitchhiker  0.0000864342 
 
 
-
 
NC_014151  Cfla_2025  transcriptional regulator, PaaX family  29.02 
 
 
306 aa  54.3  0.000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2629  PaaX family transcriptional regulator  24.9 
 
 
259 aa  53.5  0.000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.495501  normal 
 
 
-
 
NC_009485  BBta_2864  phenylacetic acid degradation operon negative regulatory protein paaX  29.63 
 
 
293 aa  53.5  0.000003  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00499823  normal  0.0484276 
 
 
-
 
NC_009832  Spro_3083  PaaX family transcriptional regulator  26.98 
 
 
312 aa  53.9  0.000003  Serratia proteamaculans 568  Bacteria  normal  normal  0.415086 
 
 
-
 
NC_010501  PputW619_2623  PaaX family transcriptional regulator  27.15 
 
 
334 aa  50.4  0.00003  Pseudomonas putida W619  Bacteria  normal  0.312733  normal  0.0873289 
 
 
-
 
NC_009512  Pput_2473  PaaX family transcriptional regulator  27.43 
 
 
334 aa  49.7  0.00004  Pseudomonas putida F1  Bacteria  normal  0.303711  normal 
 
 
-
 
NC_002947  PP_3286  PaaX family transcriptional regulator  26.7 
 
 
307 aa  49.7  0.00005  Pseudomonas putida KT2440  Bacteria  normal  0.17765  normal 
 
 
-
 
NC_010322  PputGB1_2610  PaaX family transcriptional regulator  27.15 
 
 
334 aa  49.3  0.00006  Pseudomonas putida GB-1  Bacteria  normal  0.218497  normal  0.0704814 
 
 
-
 
NC_009720  Xaut_0895  PaaX family transcriptional regulator  26.13 
 
 
305 aa  48.9  0.00006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.947925  normal 
 
 
-
 
NC_008228  Patl_3911  PaaX-like  25.36 
 
 
239 aa  48.5  0.00008  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.547243  n/a   
 
 
-
 
NC_014151  Cfla_0289  transcriptional regulator, PaaX family  30.52 
 
 
280 aa  48.1  0.0001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.010887  hitchhiker  0.0000784974 
 
 
-
 
NC_009620  Smed_4146  PaaX family transcriptional regulator  27.01 
 
 
305 aa  47.8  0.0002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.85173 
 
 
-
 
NC_009801  EcE24377A_1585  phenylacetic acid degradation operon negative regulatory protein PaaX  29.03 
 
 
316 aa  47  0.0003  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3103  PaaX family transcriptional regulator  23.24 
 
 
307 aa  47  0.0003  Marinomonas sp. MWYL1  Bacteria  decreased coverage  0.000000661945  decreased coverage  0.0000397547 
 
 
-
 
CP001637  EcDH1_2246  transcriptional regulator, PaaX family  28.77 
 
 
316 aa  46.2  0.0004  Escherichia coli DH1  Bacteria  normal  0.218129  n/a   
 
 
-
 
NC_011138  MADE_00945  PaaX-like protein  23.9 
 
 
266 aa  46.6  0.0004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.067887  n/a   
 
 
-
 
NC_013947  Snas_0703  transcriptional regulator, PaaX family  27.38 
 
 
259 aa  45.4  0.0008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1521  phenylacetic acid degradation operon negative regulatory protein PaaX  26.11 
 
 
312 aa  45.4  0.0008  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1486  phenylacetic acid degradation operon negative regulatory protein PaaX  28.31 
 
 
316 aa  44.3  0.002  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2256  PaaX family transcriptional regulator  28.31 
 
 
316 aa  44.3  0.002  Escherichia coli ATCC 8739  Bacteria  normal  0.203735  normal 
 
 
-
 
NC_009921  Franean1_1685  PaaX family transcriptional regulator  28.9 
 
 
333 aa  43.9  0.003  Frankia sp. EAN1pec  Bacteria  normal  0.0710641  normal  0.260669 
 
 
-
 
NC_013595  Sros_8420  putative transcriptional regulator, PaaX family  28.25 
 
 
260 aa  42.7  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.289328  normal 
 
 
-
 
NC_009953  Sare_0655  PaaX family transcriptional regulator  26.88 
 
 
272 aa  42.7  0.005  Salinispora arenicola CNS-205  Bacteria  normal  0.0748596  hitchhiker  0.00291671 
 
 
-
 
NC_007925  RPC_0692  phenylacetic acid degradation operon negative regulatory protein PaaX  24.88 
 
 
287 aa  42.7  0.005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.717402  normal 
 
 
-
 
NC_013131  Caci_2009  transcriptional regulator, PaaX family  25.5 
 
 
281 aa  42.4  0.006  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.429433  normal 
 
 
-
 
NC_009380  Strop_0708  PaaX family transcriptional regulator  26.48 
 
 
272 aa  42.4  0.008  Salinispora tropica CNB-440  Bacteria  normal  0.719013  normal  0.640912 
 
 
-
 
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