21 homologs were found in PanDaTox collection
for query gene Mflv_3892 on replicon NC_009338
Organism: Mycobacterium gilvum PYR-GCK



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009338  Mflv_3892  putative phage head  100 
 
 
414 aa  842    Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.862088  normal  0.410951 
 
 
-
 
NC_009338  Mflv_2917  HK97 family phage prohead protease  36.05 
 
 
579 aa  213  5.999999999999999e-54  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.595306  normal  0.164671 
 
 
-
 
NC_013530  Xcel_2063  hypothetical protein  32.4 
 
 
430 aa  108  1e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0772864  n/a   
 
 
-
 
NC_007794  Saro_0649  Phage major capsid protein, HK97  28.2 
 
 
465 aa  80.9  0.00000000000004  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.296668  n/a   
 
 
-
 
NC_011757  Mchl_1600  phage major capsid protein, HK97 family  32.22 
 
 
433 aa  79.3  0.0000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A4465  phage major capsid protein, HK97 family  31.28 
 
 
405 aa  79  0.0000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  hitchhiker  0.0000706363 
 
 
-
 
NC_007434  BURPS1710b_1682  HK97 family phage major capsid protein  31.38 
 
 
418 aa  74.3  0.000000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_0362  HK97 family phage major capsid protein  26.82 
 
 
449 aa  73.6  0.000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_0991  HK97 family phage major capsid protein  26.82 
 
 
449 aa  73.6  0.000000000005  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1668  phage major capsid protein, HK97  31.2 
 
 
403 aa  72.4  0.00000000001  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0642  phage major head protein  29.22 
 
 
403 aa  72.8  0.00000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2963  prophage LambdaSo, HK97 family major capsid protein  29.88 
 
 
396 aa  66.6  0.0000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007493  RSP_2067  prophage LambdaSo, HK97 family major capsid protein  30.04 
 
 
433 aa  65.1  0.000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.023752  n/a   
 
 
-
 
NC_009050  Rsph17029_3318  HK97 family phage major capsid protein  30.04 
 
 
433 aa  64.7  0.000000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0235436 
 
 
-
 
NC_010002  Daci_1634  major head protein  30.74 
 
 
405 aa  62  0.00000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1567  HK97 family phage major capsid protein  23.72 
 
 
414 aa  58.9  0.0000002  Pseudomonas putida KT2440  Bacteria  normal  0.944174  decreased coverage  0.0000690857 
 
 
-
 
NC_011663  Sbal223_2592  phage major capsid protein, HK97 family  26.97 
 
 
396 aa  58.2  0.0000003  Shewanella baltica OS223  Bacteria  normal  normal  0.339104 
 
 
-
 
NC_013757  Gobs_3579  phage major capsid protein, HK97  28.51 
 
 
411 aa  58.2  0.0000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.978109  n/a   
 
 
-
 
NC_010501  PputW619_1339  HK97 family phage major capsid protein  27.64 
 
 
418 aa  56.2  0.000001  Pseudomonas putida W619  Bacteria  normal  normal  0.124448 
 
 
-
 
NC_010501  PputW619_3943  HK97 family phage major capsid protein  28.4 
 
 
400 aa  52  0.00002  Pseudomonas putida W619  Bacteria  normal  0.204605  normal 
 
 
-
 
NC_007204  Psyc_0461  major phage capsid subunit precursor  26.5 
 
 
417 aa  48.9  0.0002  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.561977 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>