More than 300 homologs were found in PanDaTox collection
for query gene Mfla_1188 on replicon NC_007947
Organism: Methylobacillus flagellatus KT



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007947  Mfla_1188  cold-shock DNA-binding protein family protein  100 
 
 
68 aa  140  6e-33  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.00084266  normal 
 
 
-
 
NC_007947  Mfla_2140  cold-shock DNA-binding protein family protein  86.36 
 
 
67 aa  115  3e-25  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.000000000648799  normal 
 
 
-
 
NC_010678  Rpic_4276  cold-shock DNA-binding domain protein  77.94 
 
 
67 aa  109  2.0000000000000002e-23  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4386  cold-shock DNA-binding domain protein  77.94 
 
 
67 aa  109  2.0000000000000002e-23  Ralstonia pickettii 12D  Bacteria  normal  normal  0.490734 
 
 
-
 
NC_010627  Bphy_7382  cold-shock DNA-binding domain-containing protein  79.1 
 
 
67 aa  108  3e-23  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0708981 
 
 
-
 
NC_007404  Tbd_0679  cold-shock DNA-binding protein family protein  80.3 
 
 
68 aa  108  3e-23  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.233328  normal  0.774201 
 
 
-
 
NC_003296  RSp1053  cold shock-like transcription regulator protein  78.79 
 
 
67 aa  107  4.0000000000000004e-23  Ralstonia solanacearum GMI1000  Bacteria  normal  0.470883  normal 
 
 
-
 
NC_007434  BURPS1710b_1112  cold shock transcription regulator protein  78.79 
 
 
81 aa  107  4.0000000000000004e-23  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00000000170415  n/a   
 
 
-
 
NC_007651  BTH_I0761  cold-shock domain-contain protein  78.79 
 
 
81 aa  107  4.0000000000000004e-23  Burkholderia thailandensis E264  Bacteria  unclonable  0.00000000000025188  n/a   
 
 
-
 
NC_007298  Daro_1388  cold-shock DNA-binding protein family protein  77.61 
 
 
67 aa  107  5e-23  Dechloromonas aromatica RCB  Bacteria  decreased coverage  0.0000000000000202704  normal  0.239262 
 
 
-
 
NC_009080  BMA10247_2156  cold-shock domain-contain protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.00000351487  n/a   
 
 
-
 
NC_006348  BMA2279  cold-shock domain-contain protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia mallei ATCC 23344  Bacteria  decreased coverage  0.000000000750079  n/a   
 
 
-
 
NC_009076  BURPS1106A_0962  cold shock protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  decreased coverage  0.000153995  n/a   
 
 
-
 
NC_009074  BURPS668_0958  cold shock protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia pseudomallei 668  Bacteria  unclonable  0.000000000000117939  n/a   
 
 
-
 
NC_010084  Bmul_0775  cold-shock DNA-binding domain-containing protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia multivorans ATCC 17616  Bacteria  decreased coverage  0.0000000000150831  hitchhiker  0.000000000149768 
 
 
-
 
NC_010551  BamMC406_2438  cold-shock DNA-binding domain-containing protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia ambifaria MC40-6  Bacteria  unclonable  0.00000000000180609  unclonable  0.0000000000176576 
 
 
-
 
NC_008836  BMA10229_A1051  cold-shock domain-contain protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.000000000117316  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0574  cold-shock domain-contain protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000000000000358394  n/a   
 
 
-
 
NC_008390  Bamb_2568  cold-shock DNA-binding domain-containing protein  78.79 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia ambifaria AMMD  Bacteria  hitchhiker  0.000000063088  n/a   
 
 
-
 
NC_010623  Bphy_5169  cold-shock DNA-binding domain-containing protein  77.61 
 
 
67 aa  107  7.000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5852  cold-shock DNA-binding protein family protein  78.79 
 
 
67 aa  106  8.000000000000001e-23  Burkholderia sp. 383  Bacteria  decreased coverage  0.0000000000587256  normal  0.480668 
 
 
 
NC_010508  Bcenmc03_2545  cold-shock DNA-binding domain-containing protein  78.79