More than 300 homologs were found in PanDaTox collection
for query gene Meso_0850 on replicon NC_008254
Organism: Chelativorans sp. BNC1



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008254  Meso_0850  short-chain dehydrogenase/reductase SDR  100 
 
 
246 aa  484  1e-136  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3075  short-chain dehydrogenase/reductase SDR  42 
 
 
261 aa  172  5e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3619  short-chain dehydrogenase/reductase SDR  39.75 
 
 
247 aa  162  4.0000000000000004e-39  Chelativorans sp. BNC1  Bacteria  decreased coverage  0.00790972  n/a   
 
 
-
 
NC_011370  Rleg2_6079  short-chain dehydrogenase/reductase SDR  40.91 
 
 
255 aa  159  4e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3742  short-chain dehydrogenase/reductase SDR  40.41 
 
 
260 aa  155  6e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.071685 
 
 
-
 
NC_009720  Xaut_2807  short-chain dehydrogenase/reductase SDR  39.02 
 
 
253 aa  154  2e-36  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.422647 
 
 
-
 
NC_009485  BBta_6893  putative 3-oxoacyl-(acyl-carrier-protein) reductase  39.26 
 
 
266 aa  152  5.9999999999999996e-36  Bradyrhizobium sp. BTAi1  Bacteria  hitchhiker  0.00227102  normal  0.0503904 
 
 
-
 
NC_009050  Rsph17029_3640  short-chain dehydrogenase/reductase SDR  38.11 
 
 
251 aa  147  1.0000000000000001e-34  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.137586 
 
 
-
 
NC_008688  Pden_4822  short-chain dehydrogenase/reductase SDR  39.59 
 
 
253 aa  147  2.0000000000000003e-34  Paracoccus denitrificans PD1222  Bacteria  normal  0.237012  normal  0.451819 
 
 
-
 
NC_009952  Dshi_0620  3-oxoacyl-[acyl-carrier-protein] reductase  39.51 
 
 
250 aa  145  7.0000000000000006e-34  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.890979 
 
 
-
 
NC_009636  Smed_1437  short-chain dehydrogenase/reductase SDR  38.37 
 
 
250 aa  143  2e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.46093  decreased coverage  0.00000100027 
 
 
-
 
NC_009720  Xaut_2759  short-chain dehydrogenase/reductase SDR  40.16 
 
 
261 aa  141  9.999999999999999e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1540  short-chain dehydrogenase/reductase SDR  35.63 
 
 
267 aa  139  3e-32  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.239754  n/a   
 
 
-
 
NC_011004  Rpal_1300  short-chain dehydrogenase/reductase SDR  38.68 
 
 
262 aa  140  3e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_4158  short-chain dehydrogenase/reductase SDR  39.34 
 
 
262 aa  139  3.9999999999999997e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.526951  normal 
 
 
-
 
NC_013204  Elen_0360  short-chain dehydrogenase/reductase SDR  36.93 
 
 
249 aa  138  7e-32  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.737465 
 
 
-
 
NC_008786  Veis_4817  short-chain dehydrogenase/reductase SDR  36.63 
 
 
275 aa  138  7.999999999999999e-32  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.225049 
 
 
-
 
NC_011894  Mnod_1178  short-chain dehydrogenase/reductase SDR  39.51 
 
 
262 aa  138  8.999999999999999e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1803  short-chain dehydrogenase/reductase SDR  39.51 
 
 
262 aa  137  1e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.225984 
 
 
-
 
NC_013501  Rmar_2034  short-chain dehydrogenase/reductase SDR  37.96 
 
 
256 aa  137  1e-31  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011370  Rleg2_6085  short-chain dehydrogenase/reductase SDR  37.45 
 
 
260 aa  137  1e-31  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2375  short-chain dehydrogenase/reductase SDR  37.5 
 
 
265 aa  137  2e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009636  Smed_2459  short-chain dehydrogenase/reductase SDR  37.55 
 
 
264 aa  135  4e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_2183  short-chain dehydrogenase/reductase SDR  39.75 
 
 
244 aa  136  4e-31  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.389501 
 
 
-
 
NC_007948  Bpro_0097  short-chain dehydrogenase/reductase SDR  35.37 
 
 
262 aa  135  5e-31  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5671  short-chain dehydrogenase/reductase SDR  38.84 
 
 
271 aa  135  6.0000000000000005e-31  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2271  short-chain dehydrogenase/reductase SDR  37.4 
 
 
247 aa  132  6.999999999999999e-30  Jannaschia sp. CCS1  Bacteria  normal  0.807678  normal 
 
 
-
 
NC_007509  Bcep18194_C7112  Short-chain dehydrogenase/reductase SDR  38.17 
 
 
248 aa  130  2.0000000000000002e-29  Burkholderia sp. 383  Bacteria  normal  normal  0.912642 
 
 
-
 
NC_011894  Mnod_3437  short-chain dehydrogenase/reductase SDR  35.63 
 
 
262 aa  130  2.0000000000000002e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0974  acetoin reductase  32.4 
 
 
253 aa  130  3e-29  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4257  Short-chain dehydrogenase/reductase SDR  36.63 
 
 
262 aa  128  6e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0797349  normal 
 
 
-
 
NC_004116  SAG0523  acetoin reductase  32 
 
 
254 aa  128  1.0000000000000001e-28  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0841243  n/a   
 
 
-
 
NC_009338  Mflv_2501  short-chain dehydrogenase/reductase SDR  39.26 
 
 
233 aa  127  1.0000000000000001e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4347  short-chain dehydrogenase/reductase SDR  37.55 
 
 
256 aa  128  1.0000000000000001e-28  Mycobacterium sp. JLS  Bacteria  normal  normal  0.206497 
 
 
-
 
NC_008146  Mmcs_4116  short-chain dehydrogenase/reductase SDR  37.55 
 
 
256 aa  128  1.0000000000000001e-28  Mycobacterium sp. MCS  Bacteria  normal  0.165575  n/a   
 
 
-
 
NC_009338  Mflv_2071  short-chain dehydrogenase/reductase SDR  37.55 
 
 
258 aa  127  1.0000000000000001e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.70228  normal  0.023925 
 
 
-
 
NC_010320  Teth514_1723  3-oxoacyl-(acyl-carrier-protein) reductase  34.17 
 
 
247 aa  128  1.0000000000000001e-28  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000657249  n/a   
 
 
-
 
NC_009457  VC0395_A1607  3-ketoacyl-(acyl-carrier-protein) reductase  36.29 
 
 
248 aa  127  1.0000000000000001e-28  Vibrio cholerae O395  Bacteria  hitchhiker  0.000000000000319104  n/a   
 
 
-
 
NC_008705  Mkms_4191  short-chain dehydrogenase/reductase SDR  37.55 
 
 
256 aa  128  1.0000000000000001e-28  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2242  short-chain dehydrogenase/reductase SDR  37.39 
 
 
243 aa  127  1.0000000000000001e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.218659  normal 
 
 
-
 
NC_009484  Acry_1692  short-chain dehydrogenase/reductase SDR  39.43 
 
 
249 aa  127  2.0000000000000002e-28  Acidiphilium cryptum JF-5  Bacteria  normal  0.912822  n/a   
 
 
-
 
NC_007947  Mfla_1505  3-oxoacyl-[acyl-carrier-protein] reductase  35.92 
 
 
244 aa  127  2.0000000000000002e-28  Methylobacillus flagellatus KT  Bacteria  normal  0.0160485  normal 
 
 
-
 
NC_009439  Pmen_2709  oxidoreductase  35.56 
 
 
258 aa  127  2.0000000000000002e-28  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.370968 
 
 
-
 
NC_008686  Pden_1769  3-oxoacyl-(acyl-carrier-protein) reductase  38.14 
 
 
245 aa  126  2.0000000000000002e-28  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.485655 
 
 
-
 
NC_008752  Aave_2790  short-chain dehydrogenase/reductase SDR  38.91 
 
 
269 aa  127  2.0000000000000002e-28  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7515  short-chain dehydrogenase/reductase SDR  36.4 
 
 
246 aa  126  3e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2241  3-ketoacyl-(acyl-carrier-protein) reductase  36.29 
 
 
245 aa  126  3e-28  Aliivibrio salmonicida LFI1238  Bacteria  unclonable  0.0000319418  n/a   
 
 
-
 
NC_009921  Franean1_6917  short-chain dehydrogenase/reductase SDR  36.33 
 
 
251 aa  125  4.0000000000000003e-28  Frankia sp. EAN1pec  Bacteria  normal  normal  0.780011 
 
 
-
 
NC_010511  M446_1734  short-chain dehydrogenase/reductase SDR  36.33 
 
 
275 aa  125  6e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_6322  putative short-chain dehydrogenase  36.9 
 
 
252 aa  125  7e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_72840  putative short-chain dehydrogenase  36.9 
 
 
252 aa  125  7e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.118155  normal 
 
 
-
 
NC_010085  Nmar_0634  short-chain dehydrogenase/reductase SDR  32.24 
 
 
253 aa  125  9e-28  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_008699  Noca_2585  short chain dehydrogenase  35.37 
 
 
259 aa  125  9e-28  Nocardioides sp. JS614  Bacteria  normal  0.25122  n/a   
 
 
-
 
NC_008726  Mvan_4157  short-chain dehydrogenase/reductase SDR  36.67 
 
 
233 aa  124  1e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.981974  normal 
 
 
-
 
NC_007413  Ava_1863  glucose 1-dehydrogenase  32.67 
 
 
269 aa  123  2e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3434  short-chain dehydrogenase/reductase SDR  35.92 
 
 
263 aa  123  2e-27  Chelativorans sp. BNC1  Bacteria  normal  0.101369  n/a   
 
 
-
 
NC_009667  Oant_1182  short-chain dehydrogenase/reductase SDR  34.57 
 
 
263 aa  123  2e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1869  short-chain dehydrogenase/reductase SDR  37.76 
 
 
263 aa  123  3e-27  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2515  short-chain dehydrogenase/reductase SDR  37.08 
 
 
250 aa  122  4e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_2067  short-chain dehydrogenase/reductase SDR  30.17 
 
 
246 aa  122  4e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2079  short chain dehydrogenase  36.33 
 
 
255 aa  122  5e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2046  short-chain dehydrogenase/reductase SDR  37.34 
 
 
263 aa  122  6e-27  Acidovorax sp. JS42  Bacteria  decreased coverage  0.00404736  normal 
 
 
-
 
NC_007336  Reut_C6108  Short-chain dehydrogenase/reductase SDR  34.27 
 
 
255 aa  122  7e-27  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2691  short-chain dehydrogenase/reductase SDR  38.65 
 
 
257 aa  122  7e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.109818 
 
 
-
 
NC_013730  Slin_0608  short-chain dehydrogenase/reductase SDR  34.58 
 
 
247 aa  121  8e-27  Spirosoma linguale DSM 74  Bacteria  normal  0.0708885  normal 
 
 
-
 
NC_011901  Tgr7_1954  short chain dehydrogenase/reductase family oxidoreductase  35.22 
 
 
250 aa  121  8e-27  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2104  short-chain dehydrogenase/reductase SDR  35.42 
 
 
250 aa  121  9e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.0259595  normal 
 
 
-
 
NC_002939  GSU0696  glucose 1-dehydrogenase  34.57 
 
 
252 aa  121  9.999999999999999e-27  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2006  short-chain dehydrogenase/reductase SDR  36.55 
 
 
240 aa  121  9.999999999999999e-27  Mycobacterium sp. JLS  Bacteria  normal  0.0400117  normal  0.51074 
 
 
-
 
NC_002976  SERP2257  acetoin reductase  31.87 
 
 
262 aa  120  1.9999999999999998e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002996  3-oxoacyl-[acyl-carrier protein] reductase  34.6 
 
 
245 aa  120  1.9999999999999998e-26  Vibrio sp. Ex25  Bacteria  unclonable  0.0000000487281  n/a   
 
 
-
 
NC_008146  Mmcs_2023  short-chain dehydrogenase/reductase SDR  36.13 
 
 
240 aa  119  3e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009427  Saro_3667  short-chain dehydrogenase/reductase SDR  38.17 
 
 
259 aa  120  3e-26  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1020  3-oxoacyl-(acyl-carrier-protein) reductase  35.83 
 
 
246 aa  120  3e-26  Thermotoga petrophila RKU-1  Bacteria  normal  0.0122832  n/a   
 
 
-
 
NC_010505  Mrad2831_1897  3-oxoacyl-(acyl-carrier-protein) reductase  39.75 
 
 
245 aa  120  3e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000114593 
 
 
-
 
NC_008705  Mkms_2069  short-chain dehydrogenase/reductase SDR  36.13 
 
 
240 aa  119  3e-26  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_2450  3-oxoacyl-(acyl-carrier-protein) reductase  39.18 
 
 
249 aa  120  3e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3305  short-chain dehydrogenase/reductase SDR  36.07 
 
 
268 aa  120  3e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.552464 
 
 
-
 
NC_011661  Dtur_0943  3-oxoacyl-(acyl-carrier-protein) reductase  34.85 
 
 
246 aa  119  3e-26  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000752112  n/a   
 
 
-
 
NC_008781  Pnap_1241  short-chain dehydrogenase/reductase SDR  36.55 
 
 
260 aa  120  3e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0407787  normal  0.415093 
 
 
-
 
NC_009636  Smed_3034  short-chain dehydrogenase/reductase SDR  37.04 
 
 
256 aa  119  3.9999999999999996e-26  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.872247 
 
 
-
 
NC_011884  Cyan7425_1811  short-chain dehydrogenase/reductase SDR  32.55 
 
 
268 aa  119  3.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.271129  normal 
 
 
-
 
NC_014165  Tbis_1584  short-chain dehydrogenase/reductase SDR  35.27 
 
 
264 aa  119  4.9999999999999996e-26  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.296993 
 
 
-
 
NC_011004  Rpal_4070  short-chain dehydrogenase/reductase SDR  40.5 
 
 
275 aa  119  4.9999999999999996e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0214725  n/a   
 
 
-
 
NC_008825  Mpe_A0638  3-oxoacyl-[acyl-carrier-protein] reductase  38.37 
 
 
249 aa  119  4.9999999999999996e-26  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.326259 
 
 
-
 
NC_008726  Mvan_4643  short-chain dehydrogenase/reductase SDR  36.86 
 
 
274 aa  119  4.9999999999999996e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_1670  oxidoreductase  35.54 
 
 
272 aa  119  6e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0171077  normal 
 
 
-
 
NC_010552  BamMC406_5255  short-chain dehydrogenase/reductase SDR  34.84 
 
 
259 aa  119  6e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2513  short-chain dehydrogenase/reductase SDR  32.53 
 
 
262 aa  119  6e-26  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1259  3-oxoacyl-(acyl-carrier-protein) reductase  36.02 
 
 
245 aa  118  9e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009043  PICST_43336  Glucose 1-dehydrogenase peroxisomal 2,4- dienoyl-CoA reductase  33.6 
 
 
253 aa  118  9.999999999999999e-26  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_009513  Lreu_0162  short-chain dehydrogenase/reductase SDR  31.93 
 
 
246 aa  117  9.999999999999999e-26  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02908  3-ketoacyl-(acyl-carrier-protein) reductase  34.18 
 
 
245 aa  118  9.999999999999999e-26  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_0761  short-chain dehydrogenase/reductase SDR  37.7 
 
 
253 aa  118  9.999999999999999e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.562893  n/a   
 
 
-
 
NC_009719  Plav_2089  short-chain dehydrogenase/reductase SDR  35.37 
 
 
276 aa  117  9.999999999999999e-26  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.185872  hitchhiker  0.0000125896 
 
 
-
 
NC_007974  Rmet_5123  acetoacetyl-CoA reductase  33.47 
 
 
248 aa  117  9.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.753936  normal 
 
 
-
 
NC_008010  Dgeo_2865  short-chain dehydrogenase/reductase SDR  37.86 
 
 
255 aa  117  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1896  3-oxoacyl-(acyl-carrier-protein) reductase  37.24 
 
 
247 aa  118  9.999999999999999e-26  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.176277 
 
 
-
 
NC_013037  Dfer_4562  short-chain dehydrogenase/reductase SDR  32.24 
 
 
265 aa  117  9.999999999999999e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4317  short-chain dehydrogenase/reductase SDR  36.51 
 
 
234 aa  117  9.999999999999999e-26  Frankia sp. EAN1pec  Bacteria  normal  0.0991034  normal  0.658106 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>