8 homologs were found in PanDaTox collection
for query gene Mesil_3015 on replicon NC_014212
Organism: Meiothermus silvanus DSM 9946



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014212  Mesil_3015  ribosomal protein L28  100 
 
 
98 aa  199  9.999999999999999e-51  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_2480  50S ribosomal protein L28  73.47 
 
 
98 aa  149  1e-35  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_2250  ribosomal protein L28  54.69 
 
 
71 aa  76.6  0.0000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0446551  normal 
 
 
-
 
NC_011899  Hore_10080  ribosomal protein L28  53.12 
 
 
76 aa  64.3  0.0000000006  Halothermothrix orenii H 168  Bacteria  unclonable  8.81205e-19  n/a   
 
 
-
 
NC_008025  Dgeo_0535  50S ribosomal protein L28  60.42 
 
 
84 aa  59.7  0.00000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2279  ribosomal protein L28  52 
 
 
86 aa  52  0.000003  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3785  ribosomal protein L28  43.14 
 
 
76 aa  51.2  0.000004  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1189  50S ribosomal protein L28  38.46 
 
 
87 aa  42.7  0.002  Akkermansia muciniphila ATCC BAA-835  Bacteria  decreased coverage  0.0000000438944  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>