46 homologs were found in PanDaTox collection
for query gene Memar_0955 on replicon NC_009051
Organism: Methanoculleus marisnigri JR1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009051  Memar_0955  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  100 
 
 
463 aa  961    Methanoculleus marisnigri JR1  Archaea  normal  0.157749  n/a   
 
 
-
 
NC_008553  Mthe_0959  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  59.91 
 
 
453 aa  575  1.0000000000000001e-163  Methanosaeta thermophila PT  Archaea  normal  0.848293  n/a   
 
 
-
 
NC_011832  Mpal_0828  4Fe-4S ferredoxin iron-sulfur binding domain protein  59.43 
 
 
836 aa  552  1e-156  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.241556 
 
 
-
 
NC_008740  Maqu_2619  coenzyme F420 hydrogenase/dehydrogenase beta subunit  33.82 
 
 
468 aa  238  1e-61  Marinobacter aquaeolei VT8  Bacteria  normal  0.912572  n/a   
 
 
-
 
NC_009620  Smed_3880  hypothetical protein  37.47 
 
 
459 aa  230  3e-59  Sinorhizobium medicae WSM419  Bacteria  normal  0.712619  normal 
 
 
-
 
NC_009714  CHAB381_0961  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  35.46 
 
 
407 aa  222  9e-57  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.925835  n/a   
 
 
-
 
NC_002936  DET0214  iron-sulfur cluster-binding protein/coenzyme F420-reducing hydrogenase, beta subunit, putative  33.33 
 
 
428 aa  168  2e-40  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0139  coenzyme F420 hydrogenase/dehydrogenase beta subunit  32.52 
 
 
428 aa  161  2e-38  Dehalococcoides sp. BAV1  Bacteria  normal  0.668002  n/a   
 
 
-
 
NC_013530  Xcel_2892  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  31.88 
 
 
537 aa  157  3e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0585  coenzyme F420 hydrogenase/dehydrogenase beta subunit  26.5 
 
 
395 aa  91.7  3e-17  Methanococcus maripaludis C6  Archaea  hitchhiker  0.00081136  n/a   
 
 
-
 
NC_009958  Dshi_4135  hypothetical protein  29.77 
 
 
440 aa  90.9  5e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4481  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  26.5 
 
 
418 aa  79  0.0000000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2944  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  26.07 
 
 
409 aa  77.8  0.0000000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007355  Mbar_A0255  F420H2 dehydrogenase subunit F  23.64 
 
 
346 aa  73.2  0.00000000001  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008553  Mthe_0174  coenzyme F420 hydrogenase/dehydrogenase beta subunit  27.22 
 
 
362 aa  72  0.00000000002  Methanosaeta thermophila PT  Archaea  normal  0.318509  n/a   
 
 
-
 
NC_007955  Mbur_2371  F420H2 dehydrogenase subunit F  24.85 
 
 
343 aa  72  0.00000000002  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0662  coenzyme F420 hydrogenase beta subunit  25.21 
 
 
344 aa  67  0.0000000007  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.368347 
 
 
-
 
NC_014150  Bmur_0140  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  21.18 
 
 
867 aa  62.8  0.00000001  Brachyspira murdochii DSM 12563  Bacteria  unclonable  7.0838e-16  n/a   
 
 
-
 
NC_009051  Memar_0331  coenzyme F420 hydrogenase/dehydrogenase beta subunit  24.73 
 
 
339 aa  62.8  0.00000001  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_0783  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like  23.71 
 
 
337 aa  62  0.00000002  Methanospirillum hungatei JF-1  Archaea  hitchhiker  0.00366682  normal  0.213871 
 
 
-
 
NC_008148  Rxyl_0964  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein  29.44 
 
 
400 aa  61.2  0.00000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0907338  n/a   
 
 
-
 
NC_009635  Maeo_0778  nitrite and sulphite reductase 4Fe-4S region  26.53 
 
 
618 aa  57.4  0.0000005  Methanococcus aeolicus Nankai-3  Archaea  normal  0.542223  n/a   
 
 
-
 
NC_011832  Mpal_2707  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  26.03 
 
 
341 aa  57  0.0000006  Methanosphaerula palustris E1-9c  Archaea  normal  0.889848  normal  0.835032 
 
 
-
 
NC_009975  MmarC6_0866  coenzyme F420 hydrogenase/dehydrogenase beta subunit  24.36 
 
 
359 aa  56.6  0.0000009  Methanococcus maripaludis C6  Archaea  normal  0.161905  n/a   
 
 
-
 
NC_009637  MmarC7_1081  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.93 
 
 
359 aa  54.7  0.000004  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009635  Maeo_1303  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.73 
 
 
357 aa  53.9  0.000006  Methanococcus aeolicus Nankai-3  Archaea  normal  0.808254  n/a   
 
 
-
 
NC_009135  MmarC5_1595  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.93 
 
 
359 aa  53.5  0.000007  Methanococcus maripaludis C5  Archaea  normal  0.502541  n/a   
 
 
-
 
NC_009712  Mboo_1693  coenzyme F420 hydrogenase/dehydrogenase beta subunit  24.78 
 
 
340 aa  52  0.00002  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.884047  normal  0.69888 
 
 
-
 
NC_009634  Mevan_1095  coenzyme F420 hydrogenase/dehydrogenase beta subunit  21.84 
 
 
358 aa  50.8  0.00005  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_2177  coenzyme F420-reducing hydrogenase subunit beta  25.45 
 
 
298 aa  50.4  0.00007  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_2261  coenzyme F420 hydrogenase/dehydrogenase beta subunit-like protein  20.78 
 
 
389 aa  49.3  0.0002  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_2329  coenzyme F420-reducing hydrogenase subunit beta  23.11 
 
 
288 aa  48.1  0.0003  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009943  Dole_1150  coenzyme F420 hydrogenase/dehydrogenase beta subunit  23.12 
 
 
364 aa  47.4  0.0005  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0545  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  23.08 
 
 
697 aa  46.6  0.0009  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1250  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  28.26 
 
 
227 aa  45.8  0.002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0849107  n/a   
 
 
-
 
NC_013158  Huta_1326  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  25.5 
 
 
498 aa  45.4  0.002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.137293  n/a   
 
 
-
 
NC_013525  Tter_1334  coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein  22.39 
 
 
396 aa  45.4  0.002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007355  Mbar_A0881  coenzyme F420 hydrogenase, beta subunit  20.47 
 
 
387 aa  45.4  0.002  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_013173  Dbac_0375  4Fe-4S ferredoxin iron-sulfur binding domain protein  39.66 
 
 
91 aa  44.7  0.003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1241  ferredoxin family protein  37.25 
 
 
96 aa  45.1  0.003  Geobacter metallireducens GS-15  Bacteria  normal  0.251684  normal  0.0451259 
 
 
-
 
NC_008554  Sfum_1179  4Fe-4S ferredoxin iron-sulfur binding domain-containing protein  37.5 
 
 
557 aa  43.9  0.006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.6315 
 
 
-
 
NC_012034  Athe_1298  NADH dehydrogenase (quinone)  39.62 
 
 
598 aa  43.9  0.006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0086  coenzyme F420 hydrogenase, subunit gamma  42.86 
 
 
253 aa  43.5  0.007  Methanosphaerula palustris E1-9c  Archaea  normal  0.0290511  normal  0.0588594 
 
 
-
 
NC_011832  Mpal_0087  coenzyme F420-reducing hydrogenase subunit beta  22.55 
 
 
291 aa  43.5  0.007  Methanosphaerula palustris E1-9c  Archaea  normal  0.127818  normal  0.061617 
 
 
-
 
NC_008942  Mlab_0012  coenzyme F420-reducing hydrogenase subunit beta  21.28 
 
 
290 aa  43.1  0.01  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_007519  Dde_2146  iron-sulfur cluster-binding protein  42 
 
 
146 aa  43.1  0.01  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.471732  n/a   
 
 
-
 
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