15 homologs were found in PanDaTox collection
for query gene Mchl_1715 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_1715  hypothetical protein  100 
 
 
298 aa  587  1e-166  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.285498  decreased coverage  0.00427271 
 
 
-
 
NC_010172  Mext_1440  hypothetical protein  98.99 
 
 
298 aa  580  1.0000000000000001e-165  Methylobacterium extorquens PA1  Bacteria  normal  0.836994  normal  0.356685 
 
 
-
 
NC_010725  Mpop_1437  hypothetical protein  85.26 
 
 
299 aa  453  1.0000000000000001e-126  Methylobacterium populi BJ001  Bacteria  normal  0.587909  normal  0.479452 
 
 
-
 
NC_008347  Mmar10_2126  hypothetical protein  29.46 
 
 
318 aa  75.9  0.0000000000008  Maricaulis maris MCS10  Bacteria  normal  normal  0.323401 
 
 
-
 
NC_011071  Smal_1239  putative secreted protein  28.22 
 
 
267 aa  72.4  0.000000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.615287  normal  0.128846 
 
 
-
 
NC_010002  Daci_2291  hypothetical protein  25.34 
 
 
310 aa  63.9  0.000000003  Delftia acidovorans SPH-1  Bacteria  normal  0.851516  decreased coverage  0.000683391 
 
 
-
 
NC_008463  PA14_19030  hypothetical protein  30 
 
 
266 aa  52.8  0.000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.201714  normal  0.225368 
 
 
-
 
NC_013440  Hoch_5352  hypothetical protein  29.29 
 
 
338 aa  49.3  0.00007  Haliangium ochraceum DSM 14365  Bacteria  decreased coverage  0.00760583  normal 
 
 
-
 
NC_009656  PSPA7_1643  hypothetical protein  28.4 
 
 
266 aa  48.1  0.0002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_011832  Mpal_0926  hypothetical protein  26.26 
 
 
305 aa  47.8  0.0002  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.0906214 
 
 
-
 
NC_009073  Pcal_1299  hypothetical protein  28.35 
 
 
489 aa  45.4  0.001  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.115691 
 
 
-
 
NC_009441  Fjoh_0971  hypothetical protein  19.87 
 
 
282 aa  45.8  0.001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1043  hypothetical protein  29.3 
 
 
320 aa  45.1  0.002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_3686  hypothetical protein  26.28 
 
 
245 aa  43.5  0.004  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3106  hypothetical protein  30.15 
 
 
333 aa  43.9  0.004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.610397  normal  0.841611 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>