76 homologs were found in PanDaTox collection
for query gene Mboo_2013 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_2013  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  100 
 
 
379 aa  781    Candidatus Methanoregula boonei 6A8  Archaea  normal  0.258799  normal  0.135742 
 
 
-
 
NC_011832  Mpal_1134  NMT1/THI5 like domain protein  28.61 
 
 
365 aa  122  7e-27  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.334038 
 
 
-
 
NC_011832  Mpal_1144  NMT1/THI5 like domain protein  35.24 
 
 
357 aa  118  1.9999999999999998e-25  Methanosphaerula palustris E1-9c  Archaea  normal  0.144377  normal 
 
 
-
 
NC_012791  Vapar_1901  NMT1/THI5 like domain protein  26.69 
 
 
353 aa  92  2e-17  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1690  twin-arginine translocation pathway signal  27.34 
 
 
363 aa  89.7  7e-17  Thermobifida fusca YX  Bacteria  normal  0.525847  n/a   
 
 
-
 
NC_012560  Avin_44550  ABC transporter periplasmic component  26.7 
 
 
371 aa  89.4  9e-17  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_4540  NMT1/THI5 like domain protein  27.4 
 
 
327 aa  89.4  9e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.184718 
 
 
-
 
NC_013595  Sros_8277  ABC transport system substrate-binding protein  26.04 
 
 
336 aa  85.5  0.000000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0627957 
 
 
-
 
NC_009620  Smed_4215  NMT1/THI5-like domain-containing protein  27.68 
 
 
330 aa  83.6  0.000000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_012854  Rleg_6388  aliphatic sulfonate ABC transporter substrate-binding protein  26.33 
 
 
327 aa  81.6  0.00000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.269939  normal  0.249456 
 
 
-
 
NC_008688  Pden_5127  Fis family transcriptional regulator  26.15 
 
 
325 aa  81.3  0.00000000000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.295645  normal 
 
 
-
 
NC_014211  Ndas_4935  NMT1/THI5 like domain protein  26.58 
 
 
377 aa  76.3  0.0000000000008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0962986  normal 
 
 
-
 
NC_008541  Arth_3033  hypothetical protein  28.37 
 
 
343 aa  73.2  0.000000000008  Arthrobacter sp. FB24  Bacteria  normal  0.233167  n/a   
 
 
-
 
NC_013159  Svir_18150  ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component  28.11 
 
 
339 aa  70.1  0.00000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.886239 
 
 
-
 
NC_013131  Caci_4304  twin-arginine translocation pathway signal  26.74 
 
 
342 aa  65.1  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0262518  hitchhiker  0.00234368 
 
 
-
 
NC_009485  BBta_1367  aliphatic sulfonate ABC transporter periplasmic solute-binding protein  26.05 
 
 
368 aa  56.6  0.0000008  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0520696 
 
 
-
 
NC_013421  Pecwa_1797  ABC transporter periplasmic binding protein  29.17 
 
 
340 aa  53.9  0.000004  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1399  ABC transporter periplasmic binding protein  28.65 
 
 
341 aa  53.5  0.000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.117419  n/a   
 
 
-
 
NC_007492  Pfl01_0138  NLPA lipoprotein  28.64 
 
 
341 aa  53.5  0.000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4669  NMT1/THI5 like domain protein  27.04 
 
 
335 aa  52.8  0.000009  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1814  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  24.71 
 
 
322 aa  52  0.00002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.641284  normal  0.673988 
 
 
-
 
NC_007908  Rfer_2748  extracellular solute-binding protein  24.82 
 
 
340 aa  51.2  0.00003  Rhodoferax ferrireducens T118  Bacteria  normal  0.715028  n/a   
 
 
-
 
NC_007413  Ava_4154  ABC transporter, substrate-binding protein, aliphatic sulphonates  27.43 
 
 
367 aa  50.4  0.00004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0230431  normal  0.542699 
 
 
-
 
NC_009012  Cthe_1570  extracellular solute-binding protein  25.96 
 
 
353 aa  50.1  0.00007  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0288  NMT1/THI5 like domain protein  25.99 
 
 
327 aa  49.7  0.00008  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.133462  hitchhiker  0.0000957197 
 
 
-
 
NC_007953  Bxe_C1388  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  25.97 
 
 
317 aa  49.3  0.0001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1644  twin-arginine translocation pathway signal  25.17 
 
 
343 aa  48.5  0.0002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.76466  decreased coverage  0.00621187 
 
 
-
 
NC_009943  Dole_0212  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  28.76 
 
 
306 aa  48.5  0.0002  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4671  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  25.93 
 
 
326 aa  48.5  0.0002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.990326  normal  0.644842 
 
 
-
 
NC_008463  PA14_34770  putative ABC transporter, periplasmic binding protein  27.64 
 
 
340 aa  48.5  0.0002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.429191  normal  0.0167014 
 
 
-
 
NC_008061  Bcen_3697  ABC transporter, substrate-binding protein, aliphatic sulphonates  25.93 
 
 
326 aa  48.5  0.0002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0400  aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein  28.92 
 
 
316 aa  48.5  0.0002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.882612  n/a   
 
 
-
 
NC_010515  Bcenmc03_5629  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  25.93 
 
 
326 aa  48.1  0.0003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.265966  normal  0.757434 
 
 
-
 
NC_012560  Avin_30920  ABC transporter, periplasmic binding protein  27.46 
 
 
343 aa  47.8  0.0003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2622  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  23.38 
 
 
341 aa  47.4  0.0004  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000404129  n/a   
 
 
-
 
NC_003909  BCE_2960  sulfonate ABC transporter, sulfonate-binding protein, putative  28.19 
 
 
328 aa  47.4  0.0004  Bacillus cereus ATCC 10987  Bacteria  normal  0.641077  n/a   
 
 
-
 
NC_012560  Avin_30880  ABC transporter, periplasmic substrate-binding protein  28.12 
 
 
339 aa  47.4  0.0004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4089  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  25.48 
 
 
328 aa  47.4  0.0005  Ralstonia pickettii 12J  Bacteria  normal  0.230626  normal 
 
 
-
 
NC_012857  Rpic12D_4201  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  25.48 
 
 
328 aa  47.4  0.0005  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_1573  extracellular solute-binding protein  22.54 
 
 
326 aa  47  0.0006  Desulfotomaculum reducens MI-1  Bacteria  normal  0.817202  n/a   
 
 
-
 
NC_011899  Hore_14770  NLPA lipoprotein  22.57 
 
 
315 aa  47  0.0006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_0851  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  29.22 
 
 
328 aa  46.6  0.0007  Methanoculleus marisnigri JR1  Archaea  normal  0.0219644  n/a   
 
 
-
 
NC_009720  Xaut_3455  putative ABC transporter (substrate-binding protein)  27.27 
 
 
347 aa  46.6  0.0008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.500568  normal 
 
 
-
 
NC_007530  GBAA_2921  sulfonate ABC transporter sulfonate-binding protein  27.7 
 
 
328 aa  45.8  0.001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2713  sulfonate ABC transporter sulfonate-binding protein  27.7 
 
 
328 aa  45.8  0.001  Bacillus anthracis str. Sterne  Bacteria  normal  0.38086  n/a   
 
 
-
 
NC_007492  Pfl01_2205  ABC transporter, periplasmic substrate-binding protein  26.56 
 
 
337 aa  46.2  0.001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1079  ABC transporter, substrate-binding protein, aliphatic sulphonates  27.1 
 
 
333 aa  45.8  0.001  Synechococcus sp. CC9605  Bacteria  normal  0.0298231  normal 
 
 
-
 
NC_012880  Dd703_1299  ABC transporter periplasmic binding protein  28.49 
 
 
362 aa  45.1  0.002  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0114  sulfonate binding protein  24.75 
 
 
331 aa  45.4  0.002  Methylibium petroleiphilum PM1  Bacteria  normal  0.802065  hitchhiker  0.00280198 
 
 
-
 
NC_011773  BCAH820_2920  putative sulfonate ABC transporter, sulfonate-binding protein  27.03 
 
 
328 aa  45.1  0.002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.10374e-18 
 
 
-
 
NC_011830  Dhaf_3641  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  29.29 
 
 
333 aa  45.1  0.002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000105087  n/a   
 
 
-
 
NC_007650  BTH_II1469  aliphatic compound ABC transporter, periplasmic substrate-binding protein  26.9 
 
 
328 aa  45.1  0.002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4148  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like  24.2 
 
 
326 aa  44.7  0.003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.193725  normal  0.38818 
 
 
-
 
NC_011772  BCG9842_B2312  putative sulfonate ABC transporter, sulfonate-binding protein  27.03 
 
 
328 aa  44.7  0.003  Bacillus cereus G9842  Bacteria  normal  0.355114  hitchhiker  0.0000000431055 
 
 
-
 
NC_007355  Mbar_A1032  putative aliphatic sulfonate binding protein precursor  28.86 
 
 
327 aa  44.3  0.003  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008781  Pnap_0041  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  31 
 
 
338 aa  44.3  0.003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.487407 
 
 
-
 
NC_007963  Csal_0183  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  25.69 
 
 
345 aa  44.3  0.003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7380  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  26.64 
 
 
374 aa  44.3  0.004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4527  putative nitrate transport protein  29.13 
 
 
435 aa  43.9  0.004  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK2641  alkanesulfonates-binding protein  27.03 
 
 
328 aa  44.3  0.004  Bacillus cereus E33L  Bacteria  normal  0.245447  n/a   
 
 
-
 
NC_010086  Bmul_4340  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  28.05 
 
 
320 aa  43.9  0.004  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA1303  aliphatic compound ABC transporter, periplasmic substrate-binding protein  26.32 
 
 
327 aa  43.9  0.005  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2528  aliphatic compound ABC transporter, periplasmic substrate-binding protein  26.32 
 
 
327 aa  43.9  0.005  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1012  aliphatic sulfonate ABC transporter substrate-binding protein  26.32 
 
 
327 aa  43.9  0.005  Burkholderia mallei NCTC 10247  Bacteria  normal  0.153923  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1272  aliphatic sulfonate ABC transporter substrate-binding protein  26.32 
 
 
327 aa  43.9  0.005  Burkholderia pseudomallei 1106a  Bacteria  normal  0.526134  n/a   
 
 
-
 
NC_009075  BURPS668_A1350  aliphatic sulfonate ABC transporter substrate-binding protein  26.32 
 
 
327 aa  43.9  0.005  Burkholderia pseudomallei 668  Bacteria  normal  0.995375  n/a   
 
 
-
 
NC_008835  BMA10229_0556  aliphatic compound ABC transporter, periplasmic substrate-binding protein  26.32 
 
 
327 aa  43.9  0.005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.409832  n/a   
 
 
-
 
NC_008784  BMASAVP1_0286  aliphatic sulfonate ABC transporter substrate-binding protein  26.32 
 
 
327 aa  43.9  0.005  Burkholderia mallei SAVP1  Bacteria  normal  0.0103216  n/a   
 
 
-
 
NC_004578  PSPTO_5195  ABC transporter, periplasmic substrate-binding protein  26.56 
 
 
339 aa  43.5  0.006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A2967  putative sulfonate ABC transporter, sulfonate-binding protein  27.52 
 
 
328 aa  43.5  0.006  Bacillus cereus AH187  Bacteria  normal  0.588828  n/a   
 
 
-
 
NC_007948  Bpro_2272  putative signal peptide protein  23.67 
 
 
349 aa  43.1  0.007  Polaromonas sp. JS666  Bacteria  normal  0.863816  normal 
 
 
-
 
NC_010676  Bphyt_4880  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  23.89 
 
 
330 aa  43.5  0.007  Burkholderia phytofirmans PsJN  Bacteria  normal  0.184039  normal  0.779449 
 
 
-
 
NC_007644  Moth_1981  ABC transporter, substrate-binding protein, aliphatic sulphonates  22.83 
 
 
335 aa  43.1  0.008  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0169392  normal 
 
 
-
 
NC_011894  Mnod_2677  nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein  25.77 
 
 
343 aa  43.1  0.008  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_34350  ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component  24.32 
 
 
297 aa  43.1  0.009  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1297  putative substrate-binding protein of aliphatic sulfonate ABC transporter  24.19 
 
 
357 aa  43.1  0.009  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>