More than 300 homologs were found in PanDaTox collection
for query gene Mboo_1609 on replicon NC_009712
Organism: Candidatus Methanoregula boonei 6A8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009712  Mboo_1609  response regulator receiver protein  100 
 
 
463 aa  953    Candidatus Methanoregula boonei 6A8  Archaea  normal  0.672475  normal  0.374216 
 
 
-
 
NC_009712  Mboo_1430  hypothetical protein  40.61 
 
 
303 aa  176  6e-43  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.184012  hitchhiker  0.0001705 
 
 
-
 
NC_009712  Mboo_1528  response regulator receiver protein  44.74 
 
 
450 aa  103  8e-21  Candidatus Methanoregula boonei 6A8  Archaea  hitchhiker  0.00374994  normal  0.77554 
 
 
-
 
NC_007796  Mhun_2637  putative PAS/PAC sensor protein  43.59 
 
 
461 aa  102  2e-20  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1488  response regulator receiver protein  42.98 
 
 
450 aa  101  3e-20  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.379239 
 
 
-
 
NC_009483  Gura_2117  putative PAS/PAC sensor protein  43.86 
 
 
257 aa  100  7e-20  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2709  two component signal transduction response regulator  42.11 
 
 
429 aa  98.2  2e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3511  response regulator receiver sensor signal transduction histidine kinase  41.59 
 
 
384 aa  99  2e-19  Polaromonas sp. JS666  Bacteria  normal  normal  0.253652 
 
 
-
 
NC_007955  Mbur_2285  response regulator receiver  43.86 
 
 
130 aa  99  2e-19  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000158247  n/a   
 
 
-
 
NC_011832  Mpal_2212  response regulator receiver protein  42.24 
 
 
122 aa  98.6  2e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.092497  normal  0.290386 
 
 
-
 
NC_009712  Mboo_0900  response regulator receiver protein  43.36 
 
 
126 aa  97.8  3e-19  Candidatus Methanoregula boonei 6A8  Archaea  normal  hitchhiker  0.000110071 
 
 
-
 
NC_007908  Rfer_0895  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  39.68 
 
 
701 aa  98.2  3e-19  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0066  response regulator receiver sensor signal transduction histidine kinase  41.23 
 
 
377 aa  97.8  4e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  0.359193  normal  0.0132857 
 
 
-
 
NC_014248  Aazo_1725  multi-sensor signal transduction histidine kinase  42.98 
 
 
499 aa  95.5  2e-18  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3003  PAS/PAC sensor hybrid histidine kinase  40.35 
 
 
498 aa  95.1  2e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0428  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  42.48 
 
 
455 aa  95.1  2e-18  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_3178  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  40 
 
 
426 aa  95.1  3e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_1813  response regulator receiver protein  42.24 
 
 
316 aa  94  5e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.445517  normal  0.445863 
 
 
-
 
NC_010623  Bphy_4529  multi-sensor hybrid histidine kinase  36.67 
 
 
989 aa  94  5e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2677  response regulator receiver sensor hybrid histidine kinase  38.02 
 
 
636 aa  94  5e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.068934 
 
 
-
 
NC_007796  Mhun_1724  response regulator receiver domain-containing protein  38.46 
 
 
352 aa  94  5e-18  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A3448  putative transcriptional regulator  39.32 
 
 
143 aa  93.6  6e-18  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.132297  normal  0.0606491 
 
 
-
 
NC_007955  Mbur_1557  response regulator receiver  39.32 
 
 
131 aa  93.6  7e-18  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000000412225  n/a   
 
 
-
 
NC_013161  Cyan8802_0439  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  41.59 
 
 
455 aa  93.2  9e-18  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.444664 
 
 
-
 
NC_007955  Mbur_0841  response regulator receiver  39.32 
 
 
135 aa  93.2  9e-18  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_3039  response regulator receiver sensor signal transduction histidine kinase  39.66 
 
 
355 aa  92.4  1e-17  Methanospirillum hungatei JF-1  Archaea  normal  0.610599  normal 
 
 
-
 
NC_013730  Slin_3896  two component transcriptional regulator, LytTR family  42.15 
 
 
245 aa  91.7  2e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.356034 
 
 
-
 
NC_010338  Caul_4330  response regulator receiver protein  40.71 
 
 
127 aa  92.4  2e-17  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0893  response regulator receiver sensor signal transduction histidine kinase  42.11 
 
 
359 aa  92.4  2e-17  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  40 
 
 
373 aa  91.7  2e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007796  Mhun_0455  response regulator receiver domain-containing protein  39.83 
 
 
238 aa  91.7  3e-17  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.21261 
 
 
-
 
NC_008609  Ppro_3008  multi-sensor hybrid histidine kinase  38.1 
 
 
953 aa  91.7  3e-17  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4326  PAS/PAC sensor hybrid histidine kinase  44.25 
 
 
571 aa  90.9  4e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1235  multi-sensor hybrid histidine kinase  35.83 
 
 
989 aa  90.9  4e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  0.172784  normal 
 
 
-
 
NC_011729  PCC7424_4564  response regulator receiver sensor signal transduction histidine kinase  40.52 
 
 
376 aa  90.1  7e-17  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.531352 
 
 
-
 
NC_009712  Mboo_1497  putative PAS/PAC sensor protein  36.84 
 
 
380 aa  89  2e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.506851  normal  0.137069 
 
 
-
 
NC_002939  GSU2822  response regulator  40 
 
 
191 aa  88.2  3e-16  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1358  putative PAS/PAC sensor protein  38.26 
 
 
404 aa  87.8  4e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.873442  normal  0.0258422 
 
 
-
 
NC_007955  Mbur_2294  response regulator receiver  37.84 
 
 
134 aa  87.4  4e-16  Methanococcoides burtonii DSM 6242  Archaea  normal  0.371138  n/a   
 
 
-
 
NC_013173  Dbac_0866  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.46 
 
 
701 aa  87.4  5e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.711392  n/a   
 
 
-
 
NC_013159  Svir_25990  response regulator with putative antiterminator output domain protein  36.43 
 
 
204 aa  86.7  8e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_3510  PAS/PAC sensor hybrid histidine kinase  41.23 
 
 
521 aa  86.7  9e-16  Polaromonas sp. JS666  Bacteria  normal  normal  0.269968 
 
 
-
 
NC_009712  Mboo_1808  putative PAS/PAC sensor protein  40.68 
 
 
603 aa  86.7  9e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.268482 
 
 
-
 
NC_011769  DvMF_1460  putative PAS/PAC sensor protein  39.47 
 
 
474 aa  85.9  0.000000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.81808 
 
 
-
 
NC_013093  Amir_5540  response regulator receiver and ANTAR domain protein  38.26 
 
 
200 aa  86.3  0.000000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_2576  response regulator receiver domain-containing protein  34.48 
 
 
122 aa  86.3  0.000000000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008146  Mmcs_3021  response regulator receiver/ANTAR domain-containing protein  36.72 
 
 
210 aa  86.3  0.000000000000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3036  response regulator receiver/ANTAR domain-containing protein  36.72 
 
 
210 aa  85.9  0.000000000000001  Mycobacterium sp. JLS  Bacteria  normal  0.222389  normal  0.216241 
 
 
-
 
NC_008705  Mkms_3067  response regulator receiver/ANTAR domain-containing protein  36.72 
 
 
210 aa  86.3  0.000000000000001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_0048  putative PAS/PAC sensor protein  41.74 
 
 
255 aa  85.5  0.000000000000002  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008726  Mvan_2840  response regulator receiver/ANTAR domain-containing protein  39.13 
 
 
213 aa  85.1  0.000000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0401204  normal 
 
 
-
 
NC_009664  Krad_2958  response regulator receiver and ANTAR domain protein  33.85 
 
 
229 aa  85.9  0.000000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.799557  normal  0.502809 
 
 
-
 
NC_009712  Mboo_2407  response regulator receiver protein  37.72 
 
 
182 aa  85.1  0.000000000000003  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_008751  Dvul_0434  putative PAS/PAC sensor protein  37.17 
 
 
458 aa  84.3  0.000000000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_0573  response regulator receiver protein  40.54 
 
 
261 aa  84.3  0.000000000000004  Methanosphaerula palustris E1-9c  Archaea  normal  0.666159  normal  0.332219 
 
 
-
 
NC_009483  Gura_1730  multi-sensor signal transduction histidine kinase  37.72 
 
 
591 aa  84.3  0.000000000000005  Geobacter uraniireducens Rf4  Bacteria  normal  0.319599  n/a   
 
 
-
 
NC_011832  Mpal_1773  response regulator receiver sensor signal transduction histidine kinase  35.34 
 
 
386 aa  83.6  0.000000000000007  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_1242  multi-sensor signal transduction histidine kinase  35.96 
 
 
472 aa  83.6  0.000000000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.41521  normal 
 
 
-
 
NC_009338  Mflv_3575  response regulator receiver/ANTAR domain-containing protein  38.33 
 
 
229 aa  82.4  0.00000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.10936  normal  0.0183031 
 
 
-
 
NC_007796  Mhun_2686  putative PAS/PAC sensor protein  36.44 
 
 
337 aa  82  0.00000000000002  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.209027 
 
 
-
 
NC_011884  Cyan7425_2337  signal transduction histidine kinase  36.84 
 
 
352 aa  81.6  0.00000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11642  two component system transcriptional regulator  38.26 
 
 
205 aa  81.6  0.00000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  0.0378541  normal  0.634495 
 
 
-
 
NC_008751  Dvul_2282  histidine kinase  38.79 
 
 
667 aa  81.3  0.00000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1689  response regulator receiver and ANTAR domain protein  31.25 
 
 
201 aa  81.6  0.00000000000003  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000385738 
 
 
-
 
NC_007517  Gmet_0660  response regulator receiver/ANTAR domain-containing protein  37.01 
 
 
202 aa  80.9  0.00000000000004  Geobacter metallireducens GS-15  Bacteria  normal  0.132289  normal  0.0166929 
 
 
-
 
NC_009253  Dred_1289  response regulator receiver/ANTAR domain-containing protein  33.62 
 
 
221 aa  81.3  0.00000000000004  Desulfotomaculum reducens MI-1  Bacteria  normal  0.132207  n/a   
 
 
-
 
NC_007333  Tfu_1181  response regulator receiver  37.07 
 
 
207 aa  80.9  0.00000000000005  Thermobifida fusca YX  Bacteria  normal  0.928438  n/a   
 
 
-
 
NC_007796  Mhun_2645  putative PAS/PAC sensor protein  38.6 
 
 
336 aa  80.9  0.00000000000005  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_012669  Bcav_2208  response regulator receiver and ANTAR domain protein  28.57 
 
 
220 aa  80.5  0.00000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3061  response regulator receiver and ANTAR domain protein  38.26 
 
 
194 aa  80.5  0.00000000000006  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00113676  hitchhiker  0.000689676 
 
 
-
 
NC_008541  Arth_1694  response regulator receiver/ANTAR domain-containing protein  33.88 
 
 
201 aa  80.5  0.00000000000006  Arthrobacter sp. FB24  Bacteria  normal  0.136848  n/a   
 
 
-
 
NC_009712  Mboo_1007  putative GAF sensor protein  40.68 
 
 
311 aa  80.1  0.00000000000007  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.164021  normal  0.860345 
 
 
-
 
NC_009953  Sare_3378  response regulator receiver/ANTAR domain-containing protein  35.83 
 
 
206 aa  80.1  0.00000000000008  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0248143 
 
 
-
 
NC_009712  Mboo_1912  response regulator receiver protein  40.78 
 
 
263 aa  80.1  0.00000000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.181503  normal  0.732361 
 
 
-
 
NC_011831  Cagg_2047  response regulator receiver and ANTAR domain protein  39.47 
 
 
191 aa  78.6  0.0000000000002  Chloroflexus aggregans DSM 9485  Bacteria  unclonable  0.000000169009  normal 
 
 
-
 
NC_011831  Cagg_2933  response regulator receiver and ANTAR domain protein  37.04 
 
 
194 aa  79  0.0000000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0803562  normal  0.225953 
 
 
-
 
NC_013947  Snas_3775  response regulator receiver and ANTAR domain-containing protein  36.36 
 
 
207 aa  78.6  0.0000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.665226  normal  0.0118196 
 
 
-
 
NC_011661  Dtur_1110  response regulator receiver and ANTAR domain protein  38.46 
 
 
197 aa  78.6  0.0000000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.0520878  n/a   
 
 
-
 
NC_009712  Mboo_1311  putative PAS/PAC sensor protein  37.17 
 
 
340 aa  78.6  0.0000000000002  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.187179 
 
 
-
 
NC_009523  RoseRS_4102  response regulator receiver/ANTAR domain-containing protein  37.72 
 
 
194 aa  78.2  0.0000000000003  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0118  putative PAS/PAC sensor protein  37.96 
 
 
265 aa  78.2  0.0000000000003  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_009483  Gura_1146  response regulator receiver/ANTAR domain-containing protein  35.65 
 
 
188 aa  78.2  0.0000000000003  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_009972  Haur_4203  response regulator receiver/ANTAR domain-containing protein  37.93 
 
 
195 aa  77.8  0.0000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.793788  n/a   
 
 
-
 
NC_009380  Strop_3151  response regulator receiver  35 
 
 
206 aa  77.8  0.0000000000004  Salinispora tropica CNB-440  Bacteria  normal  normal  0.332536 
 
 
-
 
NC_007519  Dde_1631  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  35.71 
 
 
561 aa  77.4  0.0000000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.608678  n/a   
 
 
-
 
NC_014165  Tbis_1468  response regulator receiver and ANTAR domain-containing protein  35.34 
 
 
197 aa  77.4  0.0000000000005  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2035  response regulator receiver/ANTAR domain-containing protein  35 
 
 
199 aa  77.4  0.0000000000005  Frankia sp. EAN1pec  Bacteria  normal  normal  0.480822 
 
 
-
 
NC_009972  Haur_0985  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  36.28 
 
 
704 aa  77  0.0000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000494124  n/a   
 
 
-
 
NC_007955  Mbur_0834  response regulator receiver  35.34 
 
 
134 aa  77  0.0000000000007  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.000017528  n/a   
 
 
-
 
NC_009712  Mboo_1807  putative PAS/PAC sensor protein  36.94 
 
 
258 aa  77  0.0000000000007  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.254511 
 
 
-
 
NC_013757  Gobs_3208  response regulator receiver and ANTAR domain protein  35.34 
 
 
200 aa  76.6  0.0000000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1223  response regulator receiver and ANTAR domain protein  30.61 
 
 
229 aa  76.6  0.0000000000009  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.788892 
 
 
-
 
NC_009523  RoseRS_2361  response regulator receiver/ANTAR domain-containing protein  35.96 
 
 
196 aa  76.6  0.0000000000009  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2860  response regulator receiver and ANTAR domain protein  33.91 
 
 
214 aa  76.6  0.0000000000009  Thermomonospora curvata DSM 43183  Bacteria  normal  0.153721  n/a   
 
 
-
 
NC_007498  Pcar_2091  response regulator  34.78 
 
 
187 aa  76.3  0.000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6068  response regulator receiver protein  35.65 
 
 
248 aa  76.3  0.000000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3658  response regulator receiver/ANTAR domain-containing protein  36.84 
 
 
194 aa  75.9  0.000000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.568485 
 
 
-
 
NC_013595  Sros_2955  response regulator  34.75 
 
 
199 aa  76.3  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1081  response regulator receiver/ANTAR domain-containing protein  34.82 
 
 
247 aa  76.3  0.000000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1360  putative PAS/PAC sensor protein  34.82 
 
 
429 aa  75.5  0.000000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00110028  hitchhiker  0.000665614 
 
 
-
 
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