More than 300 homologs were found in PanDaTox collection
for query gene Maqu_2378 on replicon NC_008740
Organism: Marinobacter aquaeolei VT8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008740  Maqu_2378  CRP/FNR family transcriptional regulator  100 
 
 
248 aa  511  1e-144  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  53.02 
 
 
244 aa  256  3e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  53.02 
 
 
244 aa  256  3e-67  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_002947  PP_4265  transcriptional regulator Anr  52.05 
 
 
244 aa  242  3.9999999999999997e-63  Pseudomonas putida KT2440  Bacteria  normal  0.880812  normal 
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  52.05 
 
 
244 aa  242  3.9999999999999997e-63  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  52.05 
 
 
244 aa  242  5e-63  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  52.05 
 
 
244 aa  241  6e-63  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
NC_009439  Pmen_2615  CRP/FNR family transcriptional regulator  49.57 
 
 
244 aa  241  9e-63  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00240538  normal  0.855877 
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  49.57 
 
 
244 aa  238  8e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_007492  Pfl01_1811  Crp/FNR family transcriptional regulator  51.14 
 
 
244 aa  237  2e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0212  putative transcriptional regulator, Crp/Fnr family  49.78 
 
 
254 aa  236  3e-61  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_19910  Fnr-like negative transcriptional regulator of CydAB  52.31 
 
 
244 aa  235  4e-61  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1991  transcriptional activator Anr  50.92 
 
 
244 aa  235  6e-61  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.695719  n/a   
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  47.14 
 
 
253 aa  233  3e-60  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_008340  Mlg_0319  Crp/FNR family transcriptional regulator  46.38 
 
 
262 aa  226  3e-58  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  45 
 
 
250 aa  222  4e-57  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  43.05 
 
 
254 aa  218  6e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  42.6 
 
 
250 aa  218  1e-55  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  42.6 
 
 
250 aa  218  1e-55  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  43.64 
 
 
249 aa  216  2e-55  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  42.15 
 
 
250 aa  216  2.9999999999999998e-55  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_009831  Ssed_2219  fumarate/nitrate reduction transcriptional regulator  41.67 
 
 
249 aa  215  4e-55  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007912  Sde_1464  transcriptional activator Anr  42.48 
 
 
244 aa  214  8e-55  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  42.15 
 
 
250 aa  214  9.999999999999999e-55  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  42.15 
 
 
250 aa  212  3.9999999999999995e-54  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  42.15 
 
 
250 aa  212  3.9999999999999995e-54  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  42.15 
 
 
250 aa  212  3.9999999999999995e-54  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  42.15 
 
 
250 aa  212  3.9999999999999995e-54  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_011663  Sbal223_2222  fumarate/nitrate reduction transcriptional regulator  42.15 
 
 
250 aa  212  3.9999999999999995e-54  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000942023  normal  0.178468 
 
 
-
 
NC_013421  Pecwa_2398  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
248 aa  210  2e-53  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1673  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  209  4e-53  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.0983377 
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  209  4e-53  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
NC_011080  SNSL254_A1783  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  209  4e-53  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.251439 
 
 
-
 
NC_011149  SeAg_B1491  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  209  4e-53  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0202312  n/a   
 
 
-
 
NC_009436  Ent638_1853  fumarate/nitrate reduction transcriptional regulator  41.28 
 
 
250 aa  209  4e-53  Enterobacter sp. 638  Bacteria  normal  normal  0.755428 
 
 
-
 
NC_010506  Swoo_2417  fumarate/nitrate reduction transcriptional regulator  41.82 
 
 
249 aa  209  4e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0646393  decreased coverage  0.000000159166 
 
 
-
 
NC_009783  VIBHAR_02295  fumarate/nitrate reduction transcriptional regulator  42.73 
 
 
248 aa  209  4e-53  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011094  SeSA_A1785  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  209  4e-53  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.377507  normal  0.141635 
 
 
-
 
NC_012917  PC1_2105  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
248 aa  209  4e-53  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0944449  n/a   
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  41.81 
 
 
250 aa  208  5e-53  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  208  5e-53  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  208  5e-53  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  208  5e-53  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_010159  YpAngola_A2293  fumarate/nitrate reduction transcriptional regulator  41.88 
 
 
250 aa  208  5e-53  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  208  5e-53  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  208  5e-53  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003475  fumarate and nitrate reduction regulatory protein  42.27 
 
 
248 aa  208  8e-53  Vibrio sp. Ex25  Bacteria  normal  0.292896  n/a   
 
 
-
 
NC_010465  YPK_1944  fumarate/nitrate reduction transcriptional regulator  41.88 
 
 
250 aa  207  9e-53  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.755264  n/a   
 
 
-
 
NC_009708  YpsIP31758_1833  fumarate/nitrate reduction transcriptional regulator  41.88 
 
 
250 aa  207  9e-53  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1864  fumarate/nitrate reduction transcriptional regulator  41.38 
 
 
250 aa  207  1e-52  Dickeya dadantii Ech703  Bacteria  normal  0.856056  n/a   
 
 
-
 
NC_008345  Sfri_2018  fumarate/nitrate reduction transcriptional regulator  41.36 
 
 
252 aa  207  2e-52  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.831368  n/a   
 
 
-
 
NC_009457  VC0395_A1045  fumarate/nitrate reduction transcriptional regulator  42.59 
 
 
250 aa  207  2e-52  Vibrio cholerae O395  Bacteria  normal  0.18077  n/a   
 
 
-
 
NC_008700  Sama_1799  fumarate/nitrate reduction transcriptional regulator  40.36 
 
 
250 aa  206  2e-52  Shewanella amazonensis SB2B  Bacteria  normal  0.417815  normal  0.180258 
 
 
-
 
NC_011353  ECH74115_1981  fumarate/nitrate reduction transcriptional regulator  41.38 
 
 
250 aa  207  2e-52  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.320226 
 
 
-
 
NC_012912  Dd1591_2081  fumarate/nitrate reduction transcriptional regulator  41.38 
 
 
250 aa  207  2e-52  Dickeya zeae Ech1591  Bacteria  normal  0.0488524  n/a   
 
 
-
 
NC_011312  VSAL_I1571  fumarate/nitrate reduction transcriptional regulator  41.82 
 
 
250 aa  206  3e-52  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.75505  n/a   
 
 
-
 
NC_007963  Csal_0876  Crp/FNR family transcriptional regulator  43.35 
 
 
253 aa  205  5e-52  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.0000121732  n/a   
 
 
-
 
NC_009832  Spro_2582  fumarate/nitrate reduction transcriptional regulator  40.08 
 
 
254 aa  203  2e-51  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1047  cyclic nucleotide-binding: regulatory protein, Crp  42.08 
 
 
247 aa  201  9e-51  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1091  CRP/FNR family transcriptional regulator  41.23 
 
 
247 aa  200  1.9999999999999998e-50  Acidovorax sp. JS42  Bacteria  normal  0.140321  normal 
 
 
-
 
NC_011992  Dtpsy_1007  transcriptional regulator, Crp/Fnr family  40.69 
 
 
242 aa  199  1.9999999999999998e-50  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0878  fumarate/nitrate reduction transcriptional regulator  41.82 
 
 
257 aa  200  1.9999999999999998e-50  Haemophilus somnus 129PT  Bacteria  normal  0.0364978  n/a   
 
 
-
 
NC_007614  Nmul_A1773  Crp/FNR family transcriptional regulator  41.96 
 
 
263 aa  199  3e-50  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  38.64 
 
 
239 aa  198  7e-50  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1843  fumarate/nitrate reduction transcriptional regulator  39.55 
 
 
250 aa  197  1.0000000000000001e-49  Shewanella denitrificans OS217  Bacteria  normal  0.0177159  n/a   
 
 
-
 
NC_013889  TK90_0787  transcriptional regulator, Crp/Fnr family  41.44 
 
 
243 aa  195  5.000000000000001e-49  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_0931  fumarate/nitrate reduction transcriptional regulator  39.46 
 
 
249 aa  195  5.000000000000001e-49  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.896198 
 
 
-
 
NC_002947  PP_3233  Crp/FNR family transcriptional regulator  41.33 
 
 
243 aa  195  6e-49  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1288  transcriptional regulator, Crp/Fnr family  41.23 
 
 
246 aa  194  1e-48  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3775  CRP/FNR family transcriptional regulator  40.35 
 
 
265 aa  194  2e-48  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1530  Crp/FNR family transcriptional regulator  40.79 
 
 
239 aa  194  2e-48  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_2772  Crp/FNR family transcriptional regulator  39.66 
 
 
245 aa  192  4e-48  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00275745 
 
 
-
 
NC_010002  Daci_2782  Crp/FNR family transcriptional regulator  37.11 
 
 
262 aa  190  2e-47  Delftia acidovorans SPH-1  Bacteria  normal  0.0680307  normal  0.414614 
 
 
-
 
NC_007974  Rmet_4521  Crp/Fnr family transcriptional regulator  39.21 
 
 
257 aa  189  2.9999999999999997e-47  Cupriavidus metallidurans CH34  Bacteria  normal  0.0161618  normal  0.0108643 
 
 
-
 
NC_008786  Veis_1163  CRP/FNR family transcriptional regulator  39.65 
 
 
251 aa  189  2.9999999999999997e-47  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2037  Crp/FNR family transcriptional regulator  39.46 
 
 
232 aa  186  3e-46  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.441781 
 
 
-
 
NC_007948  Bpro_1207  Crp/FNR family transcriptional regulator  40.59 
 
 
264 aa  185  7e-46  Polaromonas sp. JS666  Bacteria  normal  0.494469  normal 
 
 
-
 
NC_012856  Rpic12D_1204  transcriptional regulator, Crp/Fnr family  38.57 
 
 
242 aa  184  8e-46  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1111  transcriptional regulator, Crp/Fnr family  38.57 
 
 
242 aa  184  1.0000000000000001e-45  Ralstonia pickettii 12J  Bacteria  normal  0.700786  normal  0.531022 
 
 
-
 
NC_007347  Reut_A2034  cyclic nucleotide-binding: regulatory protein, Crp  39.01 
 
 
232 aa  184  2.0000000000000003e-45  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_3345  Crp/FNR family transcriptional regulator  38.67 
 
 
247 aa  182  4.0000000000000006e-45  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.797997  normal 
 
 
-
 
NC_009512  Pput_2462  CRP/FNR family transcriptional regulator  38.96 
 
 
243 aa  182  5.0000000000000004e-45  Pseudomonas putida F1  Bacteria  normal  0.0261424  normal  0.616621 
 
 
-
 
NC_007347  Reut_A1147  cyclic nucleotide-binding: regulatory protein, Crp  41.12 
 
 
261 aa  181  9.000000000000001e-45  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1217  cyclic nucleotide-binding: regulatory protein, Crp  41.12 
 
 
261 aa  181  9.000000000000001e-45  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1170  Crp/FNR family transcriptional regulator  38.82 
 
 
274 aa  180  2e-44  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2120  Crp/FNR family transcriptional regulator  37.99 
 
 
245 aa  179  4e-44  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1283  putative fumarate and nitrate reduction regulatory transcription regulator protein  38.12 
 
 
242 aa  179  4e-44  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0516193  normal  0.32826 
 
 
-
 
NC_004578  PSPTO_1666  transcriptional regulator, Crp/Fnr family  40.89 
 
 
250 aa  179  4e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0506299  n/a   
 
 
-
 
NC_010625  Bphy_5811  Crp/FNR family transcriptional regulator  38.26 
 
 
266 aa  178  7e-44  Burkholderia phymatum STM815  Bacteria  normal  normal  0.118405 
 
 
-
 
NC_010552  BamMC406_4280  Crp/FNR family transcriptional regulator  36.1 
 
 
257 aa  178  7e-44  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0900166 
 
 
-
 
NC_008825  Mpe_A2471  transcription factor Fnr  40.17 
 
 
269 aa  177  1e-43  Methylibium petroleiphilum PM1  Bacteria  normal  0.366844  normal  0.0435693 
 
 
-
 
NC_010557  BamMC406_6195  Crp/FNR family transcriptional regulator  35.68 
 
 
257 aa  177  2e-43  Burkholderia ambifaria MC40-6  Bacteria  normal  0.107166  normal  0.295507 
 
 
-
 
NC_007650  BTH_II0460  Crp/FNR family transcriptional regulator  37.34 
 
 
260 aa  177  2e-43  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3812  Crp/FNR family transcriptional regulator  35.68 
 
 
257 aa  177  2e-43  Burkholderia ambifaria AMMD  Bacteria  normal  0.279241  normal  0.577974 
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  40 
 
 
248 aa  176  3e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  39.11 
 
 
248 aa  174  9e-43  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4265  Crp/FNR family transcriptional regulator  37.45 
 
 
259 aa  174  9.999999999999999e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.367581  normal  0.892156 
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  39.37 
 
 
248 aa  174  9.999999999999999e-43  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1692  Crp/FNR family transcriptional regulator  37.67 
 
 
244 aa  174  9.999999999999999e-43  Cupriavidus metallidurans CH34  Bacteria  normal  0.816346  normal 
 
 
-
 
NC_007908  Rfer_1937  Crp/FNR family transcriptional regulator  40.76 
 
 
223 aa  173  1.9999999999999998e-42  Rhodoferax ferrireducens T118  Bacteria  normal  0.155753  n/a   
 
 
-
 
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