41 homologs were found in PanDaTox collection
for query gene MCA0780 on replicon NC_002977
Organism: Methylococcus capsulatus str. Bath



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002977  MCA0780  MxaJ protein  100 
 
 
190 aa  393  1e-109  Methylococcus capsulatus str. Bath  Bacteria  normal  0.173014  n/a   
 
 
-
 
NC_007925  RPC_1908  extracellular solute-binding protein  53.41 
 
 
309 aa  197  7e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.365185  normal 
 
 
-
 
NC_010725  Mpop_4631  extracellular solute-binding protein family 3  47.46 
 
 
292 aa  174  5e-43  Methylobacterium populi BJ001  Bacteria  normal  normal  0.548325 
 
 
-
 
NC_011757  Mchl_4517  extracellular solute-binding protein family 3  46.89 
 
 
300 aa  172  2.9999999999999996e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.627659  normal 
 
 
-
 
NC_010172  Mext_4149  extracellular solute-binding protein  46.33 
 
 
296 aa  171  5e-42  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.514926 
 
 
-
 
NC_011887  Mnod_8039  extracellular solute-binding protein family 3  44.32 
 
 
281 aa  159  3e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.465628  n/a   
 
 
-
 
NC_007947  Mfla_2043  extracellular solute-binding protein  42.13 
 
 
280 aa  158  5e-38  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4209  extracellular solute-binding protein  43.43 
 
 
302 aa  155  3e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.352464  normal  0.132236 
 
 
-
 
NC_011666  Msil_0472  extracellular solute-binding protein family 3  43.43 
 
 
285 aa  153  2e-36  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_1828  extracellular solute-binding protein  47.85 
 
 
283 aa  149  3e-35  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.624367 
 
 
-
 
NC_008687  Pden_2994  extracellular solute-binding protein  41.48 
 
 
276 aa  142  2e-33  Paracoccus denitrificans PD1222  Bacteria  normal  0.141592  normal  0.958295 
 
 
-
 
NC_007947  Mfla_2313  extracellular solute-binding protein  32.77 
 
 
305 aa  99  3e-20  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000951817  unclonable  0.000000229382 
 
 
-
 
NC_009484  Acry_2791  extracellular solute-binding protein  34.48 
 
 
289 aa  90.1  2e-17  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1763  extracellular solute-binding protein family 3  28.96 
 
 
284 aa  71.2  0.000000000009  Methylobacterium populi BJ001  Bacteria  normal  0.863479  normal 
 
 
-
 
NC_010172  Mext_1811  extracellular solute-binding protein  28.18 
 
 
284 aa  69.7  0.00000000002  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.893534 
 
 
-
 
NC_011757  Mchl_2147  extracellular solute-binding protein family 3  28.18 
 
 
284 aa  69.7  0.00000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.541175  normal  0.31516 
 
 
-
 
NC_009622  Smed_6352  extracellular solute-binding protein  31.18 
 
 
273 aa  68.6  0.00000000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.756783 
 
 
-
 
NC_010505  Mrad2831_0510  extracellular solute-binding protein  29.71 
 
 
286 aa  68.2  0.00000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0862535  normal 
 
 
-
 
NC_011666  Msil_1585  extracellular solute-binding protein family 3  26.97 
 
 
282 aa  66.2  0.0000000003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0856617 
 
 
-
 
NC_012791  Vapar_0699  extracellular solute-binding protein family 3  29.12 
 
 
282 aa  64.7  0.0000000008  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5979  extracellular solute-binding protein family 3  29.21 
 
 
288 aa  63.2  0.000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.077375  n/a   
 
 
-
 
NC_011894  Mnod_2345  extracellular solute-binding protein family 3  29.31 
 
 
277 aa  61.2  0.000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.366121  n/a   
 
 
-
 
NC_010511  M446_5754  extracellular solute-binding protein  28.41 
 
 
298 aa  61.2  0.000000008  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.707188 
 
 
-
 
NC_010172  Mext_0098  extracellular solute-binding protein  30.34 
 
 
278 aa  60.1  0.00000002  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal 
 
 
-
 
NC_011666  Msil_3148  Ankyrin  30.86 
 
 
581 aa  58.2  0.00000007  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010625  Bphy_6476  extracellular solute-binding protein  22.7 
 
 
304 aa  57.8  0.00000009  Burkholderia phymatum STM815  Bacteria  normal  0.33826  normal  0.119349 
 
 
-
 
NC_010511  M446_2993  extracellular solute-binding protein  30.34 
 
 
287 aa  57.4  0.0000001  Methylobacterium sp. 4-46  Bacteria  normal  0.23641  normal  0.0529683 
 
 
-
 
NC_011666  Msil_3386  extracellular solute-binding protein family 3  27.08 
 
 
272 aa  57  0.0000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_3042  extracellular solute-binding protein family 3  26.09 
 
 
296 aa  57  0.0000001  Variovorax paradoxus S110  Bacteria  normal  0.262852  n/a   
 
 
-
 
NC_002977  MCA0300  MxaJ protein  28.19 
 
 
284 aa  56.6  0.0000002  Methylococcus capsulatus str. Bath  Bacteria  normal  0.579886  n/a   
 
 
-
 
NC_008825  Mpe_A3395  MxaJ protein  27.69 
 
 
291 aa  56.2  0.0000003  Methylibium petroleiphilum PM1  Bacteria  normal  decreased coverage  0.00965407 
 
 
-
 
NC_010524  Lcho_3108  extracellular solute-binding protein  27.66 
 
 
293 aa  53.9  0.000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009485  BBta_5951  putative methanol oxidation protein  25 
 
 
291 aa  53.9  0.000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.834577  normal  0.721299 
 
 
-
 
NC_009620  Smed_3941  extracellular solute-binding protein  27.27 
 
 
285 aa  54.3  0.000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.792832  normal 
 
 
-
 
NC_007952  Bxe_B2425  ABC transporter, periplasmic ligand binding protein  23.37 
 
 
303 aa  53.5  0.000002  Burkholderia xenovorans LB400  Bacteria  normal  0.0414883  normal 
 
 
-
 
NC_008686  Pden_0022  extracellular solute-binding protein  28.82 
 
 
270 aa  52.4  0.000004  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1238  extracellular solute-binding protein  27.27 
 
 
274 aa  51.2  0.000008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.532355 
 
 
-
 
NC_009428  Rsph17025_1943  extracellular solute-binding protein  24.86 
 
 
270 aa  50.1  0.00002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2580  putative methanol oxidation protein  26.7 
 
 
274 aa  49.7  0.00003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0478  extracellular solute-binding protein family 3  24.43 
 
 
282 aa  47.4  0.0001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.648252  normal 
 
 
-
 
NC_009720  Xaut_1779  extracellular solute-binding protein  25.29 
 
 
307 aa  45.8  0.0004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.117507  normal  0.179012 
 
 
-
 
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