More than 300 homologs were found in PanDaTox collection
for query gene M446_5573 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_5573  branched chain amino acid ABC transporter periplasmic ligand-binding protein  100 
 
 
396 aa  818    Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_8044  Extracellular ligand-binding receptor  66.85 
 
 
406 aa  553  1e-156  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3913  Extracellular ligand-binding receptor  58.57 
 
 
404 aa  498  1e-140  Burkholderia phytofirmans PsJN  Bacteria  normal  0.956199  normal 
 
 
-
 
NC_007651  BTH_I3329  branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein  58.23 
 
 
398 aa  496  1e-139  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0019  branched chain amino acid ABC transporter periplasmic ligand-binding protein  58.31 
 
 
404 aa  496  1e-139  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2936  branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein  58.9 
 
 
398 aa  493  9.999999999999999e-139  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1607  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  58.9 
 
 
392 aa  493  9.999999999999999e-139  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0085  branched chain amino acid ABC transporter periplasmic ligand-binding protein  59.41 
 
 
399 aa  491  9.999999999999999e-139  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.56224  normal 
 
 
-
 
NC_007434  BURPS1710b_0198  branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein  58.9 
 
 
398 aa  493  9.999999999999999e-139  Burkholderia pseudomallei 1710b  Bacteria  normal  0.352006  n/a   
 
 
-
 
NC_007510  Bcep18194_A3267  branched chain amino acid ABC transporter periplasmic ligand-binding protein  59.41 
 
 
399 aa  491  9.999999999999999e-139  Burkholderia sp. 383  Bacteria  normal  normal  0.275506 
 
 
-
 
NC_009076  BURPS1106A_4065  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  58.9 
 
 
398 aa  493  9.999999999999999e-139  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3991  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  58.9 
 
 
398 aa  493  9.999999999999999e-139  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3375  putative amino acid uptake ABC transporter, periplasmic amino acid-binding protein  58.9 
 
 
398 aa  493  9.999999999999999e-139  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3211  Extracellular ligand-binding receptor  59.41 
 
 
402 aa  488  1e-137  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3342  putative substrate-binding periplasmic (PBP) ABC transporter protein  56.25 
 
 
402 aa  488  1e-136  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0103  branched chain amino acid ABC transporter periplasmic ligand-binding protein  58.87 
 
 
399 aa  488  1e-136  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.32797  normal 
 
 
-
 
NC_010682  Rpic_3537  putative substrate-binding periplasmic (PBP) ABC transporter protein  59.14 
 
 
402 aa  486  1e-136  Ralstonia pickettii 12J  Bacteria  normal  0.277166  normal  0.0827229 
 
 
-
 
NC_010551  BamMC406_0087  extracellular ligand-binding receptor  58.87 
 
 
399 aa  485  1e-136  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0356646  normal 
 
 
-
 
NC_007973  Rmet_3518  extracellular ligand-binding receptor  56.5 
 
 
402 aa  486  1e-136  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.36456 
 
 
-
 
NC_008060  Bcen_2970  branched chain amino acid ABC transporter periplasmic ligand-binding protein  58.6 
 
 
399 aa  486  1e-136  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0085  branched chain amino acid ABC transporter periplasmic ligand-binding protein  58.6 
 
 
399 aa  486  1e-136  Burkholderia cenocepacia HI2424  Bacteria  normal  0.782241  n/a   
 
 
-
 
NC_010622  Bphy_3047  extracellular ligand-binding receptor  57.11 
 
 
404 aa  482  1e-135  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0076  extracellular ligand-binding receptor  58.6 
 
 
399 aa  483  1e-135  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A3369  extracellular ligand-binding receptor  58.6 
 
 
402 aa  480  1e-134  Ralstonia eutropha JMP134  Bacteria  normal  0.998438  n/a   
 
 
-
 
NC_008825  Mpe_A3756  putative substrate-binding periplasmic (pbp) ABC transporter protein  58.18 
 
 
407 aa  477  1e-133  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.260098 
 
 
-
 
NC_011992  Dtpsy_2466  Extracellular ligand-binding receptor  54.66 
 
 
400 aa  470  1.0000000000000001e-131  Acidovorax ebreus TPSY  Bacteria  normal  0.469696  n/a   
 
 
-
 
NC_008782  Ajs_3120  putative substrate-binding periplasmic (pbp) ABC transporter protein  54.41 
 
 
400 aa  469  1.0000000000000001e-131  Acidovorax sp. JS42  Bacteria  normal  0.347887  normal 
 
 
-
 
NC_008752  Aave_1282  extracellular ligand-binding receptor  54.98 
 
 
406 aa  468  1.0000000000000001e-131  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0780459  normal  0.651455 
 
 
-
 
NC_008782  Ajs_3119  extracellular ligand-binding receptor  55.05 
 
 
398 aa  465  9.999999999999999e-131  Acidovorax sp. JS42  Bacteria  normal  0.125075  normal 
 
 
-
 
NC_011992  Dtpsy_2465  Extracellular ligand-binding receptor  54.8 
 
 
398 aa  462  1e-129  Acidovorax ebreus TPSY  Bacteria  normal  0.357174  n/a   
 
 
-
 
NC_008786  Veis_4075  ABC-type transporter, periplasmic component  53.52 
 
 
404 aa  459  9.999999999999999e-129  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.624367 
 
 
-
 
NC_008752  Aave_1283  putative substrate-binding periplasmic (pbp) ABC transporter protein  55.73 
 
 
401 aa  455  1e-127  Acidovorax citrulli AAC00-1  Bacteria  normal  0.154147  normal 
 
 
-
 
NC_007953  Bxe_C0514  branched chain amino acid ABC transporter periplasmic ligand-binding protein  52.8 
 
 
400 aa  444  1.0000000000000001e-124  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0008  extracellular ligand-binding receptor  53.08 
 
 
400 aa  445  1.0000000000000001e-124  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.0939525  n/a   
 
 
-
 
NC_010002  Daci_2318  putative substrate-binding periplasmic (pbp) ABC transporter protein  53.49 
 
 
403 aa  442  1e-123  Delftia acidovorans SPH-1  Bacteria  normal  0.555979  normal  0.535279 
 
 
-
 
NC_012791  Vapar_3485  Extracellular ligand-binding receptor  54.97 
 
 
398 aa  444  1e-123  Variovorax paradoxus S110  Bacteria  normal  0.381916  n/a   
 
 
-
 
NC_009485  BBta_0682  putative branched chain amino acid binding protein  53.55 
 
 
395 aa  439  9.999999999999999e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.246685  normal  0.442954 
 
 
-
 
NC_007908  Rfer_1077  extracellular ligand-binding receptor  53.62 
 
 
397 aa  441  9.999999999999999e-123  Rhodoferax ferrireducens T118  Bacteria  decreased coverage  0.0000554995  n/a   
 
 
-
 
NC_008781  Pnap_3529  extracellular ligand-binding receptor  54.16 
 
 
397 aa  439  9.999999999999999e-123  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.042782  normal 
 
 
-
 
NC_007948  Bpro_4077  extracellular ligand-binding receptor  50.52 
 
 
397 aa  435  1e-121  Polaromonas sp. JS666  Bacteria  normal  normal  0.406795 
 
 
-
 
NC_010002  Daci_5162  putative substrate-binding periplasmic (pbp) ABC transporter protein  52.91 
 
 
398 aa  433  1e-120  Delftia acidovorans SPH-1  Bacteria  normal  0.15516  normal 
 
 
-
 
NC_007778  RPB_1152  UreA/short-chain amide ABC transporter  53.83 
 
 
415 aa  431  1e-119  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.471291  normal  0.323569 
 
 
-
 
NC_010511  M446_1790  Leu/Ile/Val-binding family protein  53.37 
 
 
417 aa  431  1e-119  Methylobacterium sp. 4-46  Bacteria  normal  0.322977  normal  0.0207356 
 
 
-
 
NC_011004  Rpal_5300  putative periplasmic substrate binding protein  54.96 
 
 
397 aa  428  1e-119  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.401613  n/a   
 
 
-
 
NC_007778  RPB_4690  extracellular ligand-binding receptor  53.33 
 
 
397 aa  426  1e-118  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3887  ureA/short-chain amide ABC transporter  51.05 
 
 
413 aa  422  1e-117  Ralstonia eutropha JMP134  Bacteria  normal  0.0891482  n/a   
 
 
-
 
NC_007925  RPC_0074  putative branched chain amino acid periplasmic binding protein of ABC transporter  51.67 
 
 
399 aa  423  1e-117  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0709  Leu/Ile/Val-binding family protein  51.43 
 
 
406 aa  424  1e-117  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.195015  n/a   
 
 
-
 
NC_007958  RPD_1254  ABC-type branched-chain amino acid transport systems, periplasmic component  53.03 
 
 
427 aa  423  1e-117  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.946675 
 
 
-
 
NC_010505  Mrad2831_3789  Leu/Ile/Val-binding family protein  52.29 
 
 
409 aa  421  1e-117  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.710609 
 
 
-
 
NC_007958  RPD_4400  putative branched chain amino acid periplasmic binding protein of ABC transporter  53.62 
 
 
397 aa  422  1e-117  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1640  putative UreA/short-chain amide ABC transporter  50.53 
 
 
412 aa  419  1e-116  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.000640664  normal 
 
 
-
 
NC_010524  Lcho_3593  putative ABC transporter substrate binding protein  52.28 
 
 
403 aa  419  1e-116  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.636574 
 
 
-
 
NC_004311  BRA0953  branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative  51.83 
 
 
401 aa  415  9.999999999999999e-116  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0894  putative branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein  52.09 
 
 
401 aa  416  9.999999999999999e-116  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1377  ABC transporter substrate-binding protein  50.64 
 
 
404 aa  418  9.999999999999999e-116  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4932  extracellular ligand-binding receptor  49.73 
 
 
409 aa  416  9.999999999999999e-116  Burkholderia phymatum STM815  Bacteria  normal  0.350034  normal 
 
 
-
 
NC_009667  Oant_1402  branched-chain amino acid ABC transporter, periplasmic amino acid- binding protein  52.63 
 
 
401 aa  417  9.999999999999999e-116  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8470  ABC-type branched-chain amino acid transport systems, periplasmic component  49.87 
 
 
411 aa  412  1e-114  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.481667  n/a   
 
 
-
 
NC_007336  Reut_C5957  extracellular ligand-binding receptor  50.27 
 
 
409 aa  410  1e-113  Ralstonia eutropha JMP134  Bacteria  normal  0.0908104  n/a   
 
 
-
 
NC_007958  RPD_2256  extracellular ligand-binding receptor  49.47 
 
 
403 aa  408  1e-113  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.777349  normal  0.277076 
 
 
-
 
NC_007778  RPB_3199  extracellular ligand-binding receptor  48 
 
 
405 aa  408  1.0000000000000001e-112  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.206752  normal  0.636131 
 
 
-
 
NC_011992  Dtpsy_3122  Extracellular ligand-binding receptor  47.83 
 
 
419 aa  407  1.0000000000000001e-112  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_4670  putative ABC transporter, substrate-binding protein  51.04 
 
 
403 aa  406  1.0000000000000001e-112  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6729  Extracellular ligand-binding receptor  50.13 
 
 
401 aa  407  1.0000000000000001e-112  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2487  Extracellular ligand-binding receptor  49.73 
 
 
404 aa  407  1.0000000000000001e-112  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.589907  n/a   
 
 
-
 
NC_011366  Rleg2_5823  putative branched-chain amino acid ABC transporter, substrate-binding protein  49.62 
 
 
401 aa  404  1e-111  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.281514  normal  0.102648 
 
 
-
 
NC_010531  Pnec_0008  Extracellular ligand-binding receptor  52.01 
 
 
408 aa  402  1e-111  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0278078 
 
 
-
 
NC_007760  Adeh_2137  ABC branched-chain amino acid transporter, periplasmic ligand biinding protein  50.4 
 
 
404 aa  400  9.999999999999999e-111  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4079  ABC-type branched-chain amino acid transport system, periplasmic component  49.2 
 
 
405 aa  400  9.999999999999999e-111  Xanthobacter autotrophicus Py2  Bacteria  normal  0.23084  normal 
 
 
-
 
NC_007958  RPD_0275  putative ureA/short-chain amide ABC transporter  50.26 
 
 
401 aa  401  9.999999999999999e-111  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.325884 
 
 
-
 
NC_011004  Rpal_0486  substrate-binding protein  50.12 
 
 
401 aa  399  9.999999999999999e-111  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5091  putative branched-chain amino acid ABC transporter, substrate-binding protein  48.39 
 
 
416 aa  395  1e-109  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.339692  normal  0.603773 
 
 
-
 
NC_010511  M446_3891  extracellular ligand-binding receptor  49.73 
 
 
406 aa  395  1e-109  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0182  extracellular ligand-binding receptor  47.31 
 
 
413 aa  396  1e-109  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2864  putative periplasmic binding ABC transporter protein  46.98 
 
 
401 aa  396  1e-109  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.581336 
 
 
-
 
NC_011891  A2cp1_1820  Extracellular ligand-binding receptor  49.87 
 
 
404 aa  397  1e-109  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1677  ABC branched-chain amino acid transporter, periplasmic ligand biinding protein  49.87 
 
 
404 aa  396  1e-109  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_7539  putative ABC transporter (substrate binding protein)  51.53 
 
 
394 aa  394  1e-108  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3297  ABC branched-chain amino acid transporter, periplasmic binding protein  49.06 
 
 
400 aa  392  1e-108  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.300791  n/a   
 
 
-
 
NC_007778  RPB_0554  ureA/short-chain amide ABC transporter  49.24 
 
 
402 aa  392  1e-108  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.930825  normal  0.0786148 
 
 
-
 
NC_011894  Mnod_3421  ABC transporter substrate-binding protein  49.49 
 
 
406 aa  393  1e-108  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_4029  ABC branched-chain amino acid transporter, periplasmic binding protein  49.06 
 
 
400 aa  390  1e-107  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7057  Extracellular ligand-binding receptor  50.94 
 
 
420 aa  389  1e-107  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3119  Extracellular ligand-binding receptor  48.74 
 
 
403 aa  390  1e-107  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.741733  n/a   
 
 
-
 
NC_009720  Xaut_1437  extracellular ligand-binding receptor  49.5 
 
 
401 aa  389  1e-107  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.694305 
 
 
-
 
NC_007964  Nham_1674  ABC transporter substrate-binding protein  51.99 
 
 
409 aa  386  1e-106  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5117  putative UreA/short-chain amide ABC transporter  50.75 
 
 
404 aa  386  1e-106  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3849  putative UreA/short-chain amide ABC transporter  48.77 
 
 
392 aa  384  1e-105  Acidovorax sp. JS42  Bacteria  normal  0.375619  normal 
 
 
-
 
NC_010511  M446_6250  ABC transporter substrate-binding protein  50 
 
 
413 aa  384  1e-105  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0435582 
 
 
-
 
NC_009485  BBta_6215  putative ABC branched-chain amino transporter, periplasmic binding protein  47.93 
 
 
403 aa  383  1e-105  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.947625  normal 
 
 
-
 
NC_008686  Pden_1717  ABC branched-chain amino acid transporter, periplasmic binding protein  47.1 
 
 
399 aa  382  1e-105  Paracoccus denitrificans PD1222  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_009429  Rsph17025_3292  hypothetical protein  47.17 
 
 
400 aa  380  1e-104  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.406168  normal 
 
 
-
 
NC_009485  BBta_3757  ABC transporter substrate-binding protein  47.77 
 
 
409 aa  379  1e-104  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3348  extracellular ligand-binding receptor  47.74 
 
 
403 aa  376  1e-103  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.164921 
 
 
-
 
NC_010505  Mrad2831_4022  extracellular ligand-binding receptor  48.92 
 
 
404 aa  375  1e-103  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.339015  normal  0.405471 
 
 
-
 
NC_007643  Rru_A3303  amide-urea binding protein  47.31 
 
 
404 aa  375  1e-103  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.219547  n/a   
 
 
-
 
NC_010511  M446_1336  extracellular ligand-binding receptor  49.34 
 
 
400 aa  375  1e-103  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.116449 
 
 
-
 
NC_011894  Mnod_3282  Extracellular ligand-binding receptor  50 
 
 
408 aa  376  1e-103  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0100489  n/a   
 
 
-
 
NC_009717  Xaut_5024  extracellular ligand-binding receptor  47.69 
 
 
400 aa  376  1e-103  Xanthobacter autotrophicus Py2  Bacteria  normal  0.151241  normal 
 
 
-
 
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