34 homologs were found in PanDaTox collection
for query gene M446_1724 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_1724  CRISPR-associated Cas5 family protein  100 
 
 
218 aa  442  1e-123  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1629  CRISPR-associated protein Cas5 family  68.1 
 
 
223 aa  285  2.9999999999999996e-76  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.122898  normal  0.364818 
 
 
-
 
NC_012560  Avin_31620  CRISPR-associated protein Cas5d  63.98 
 
 
224 aa  249  3e-65  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0602  CRISPR-associated Cas5d family protein  60.58 
 
 
225 aa  246  2e-64  Methylobacillus flagellatus KT  Bacteria  normal  0.133599  normal  0.212171 
 
 
-
 
NC_007643  Rru_A0829  CRISPR-associated RAMP Csd5d family protein  61.06 
 
 
221 aa  243  9.999999999999999e-64  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1003  CRISPR-associated Cas5 family protein  55.77 
 
 
221 aa  220  9.999999999999999e-57  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_02700  crispr-associated protein Cas5, dvulg subtype  61.03 
 
 
204 aa  219  1.9999999999999999e-56  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.417483  n/a   
 
 
-
 
NC_007406  Nwi_1940  CRISPR-associated Csd1 family protein  54.88 
 
 
230 aa  214  9.999999999999999e-55  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1972  CRISPR-associated protein Cas5 family  54.81 
 
 
221 aa  207  9e-53  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008346  Swol_0476  hypothetical protein  53.37 
 
 
220 aa  207  1e-52  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1477  CRISPR-associated protein Cas5 family  50.48 
 
 
218 aa  206  3e-52  Clostridium cellulolyticum H10  Bacteria  normal  0.540758  n/a   
 
 
-
 
NC_008741  Dvul_2977  CRISPR-associated Cas5 family protein  55.34 
 
 
227 aa  204  8e-52  Desulfovibrio vulgaris DP4  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1658  CRISPR-associated protein Cas5 family  52.88 
 
 
211 aa  203  2e-51  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0656  CRISPR-associated Csd1 family protein  52.4 
 
 
222 aa  192  3e-48  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1160  CRISPR-associated Cas5 family protein  49.52 
 
 
218 aa  188  7e-47  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013422  Hneap_0825  CRISPR-associated protein Cas5 family  52.15 
 
 
221 aa  186  2e-46  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1978  CRISPR-associated protein Cas5 family  50.24 
 
 
220 aa  186  3e-46  Eggerthella lenta DSM 2243  Bacteria  normal  0.0116209  normal 
 
 
-
 
NC_007517  Gmet_1065  CRISPR-associated Csd1 family protein  48.42 
 
 
227 aa  173  1.9999999999999998e-42  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0551157 
 
 
-
 
NC_008639  Cpha266_1435  CRISPR-associated Cas5 family protein  44.83 
 
 
237 aa  165  5e-40  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_1296  CRISPR-associated Csd1 family protein  45.69 
 
 
237 aa  165  5.9999999999999996e-40  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0497  CRISPR-associated Csd1 family protein  47.14 
 
 
233 aa  155  3e-37  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3581  Cas5 family CRISPR-associated protein  41.06 
 
 
231 aa  138  7.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3342  hypothetical protein  40.58 
 
 
221 aa  125  3e-28  Frankia sp. CcI3  Bacteria  decreased coverage  0.00560307  normal  0.552399 
 
 
-
 
NC_013946  Mrub_1488  Cas5 family CRISPR-associated protein  38.3 
 
 
247 aa  122  4e-27  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.107953 
 
 
-
 
NC_014213  Mesil_3384  hypothetical protein  38.3 
 
 
248 aa  113  2.0000000000000002e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  0.773092  normal 
 
 
-
 
NC_008025  Dgeo_0238  CRISPR-associated Cas5d family protein  35.98 
 
 
251 aa  112  5e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4334  CRISPR-associated Cas5 family protein  31.19 
 
 
242 aa  84.7  9e-16  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00683979  normal  0.0386207 
 
 
-
 
NC_007514  Cag_1009  CRISPR-associated Csd1 family protein  27.27 
 
 
238 aa  71.6  0.000000000008  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3902  CRISPR-associated Cas5d family protein  28.17 
 
 
237 aa  69.7  0.00000000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3650  CRISPR-associated protein Cas5 family  27.93 
 
 
233 aa  68.2  0.0000000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008942  Mlab_0849  hypothetical protein  27.56 
 
 
237 aa  66.2  0.0000000004  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_011830  Dhaf_2183  CRISPR-associated protein Cas5  28.18 
 
 
224 aa  63.9  0.000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3520  CRISPR-associated Cas5 family protein  29.49 
 
 
240 aa  58.9  0.00000005  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_0797  CRISPR-associated protein Cas5  32.69 
 
 
211 aa  55.5  0.0000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.441473  n/a   
 
 
-
 
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