More than 300 homologs were found in PanDaTox collection
for query gene M446_0844 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_0844  short-chain dehydrogenase/reductase SDR  100 
 
 
286 aa  588  1e-167  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1379  short-chain dehydrogenase/reductase SDR  94.41 
 
 
286 aa  561  1.0000000000000001e-159  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.268463  n/a   
 
 
-
 
NC_010505  Mrad2831_2460  short-chain dehydrogenase/reductase SDR  82.17 
 
 
286 aa  498  1e-140  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.239121  normal 
 
 
-
 
NC_010725  Mpop_1330  short-chain dehydrogenase/reductase SDR  76.92 
 
 
285 aa  458  9.999999999999999e-129  Methylobacterium populi BJ001  Bacteria  normal  normal  0.359984 
 
 
-
 
NC_011757  Mchl_0766  short-chain dehydrogenase/reductase SDR  75.52 
 
 
285 aa  453  1.0000000000000001e-126  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.717925 
 
 
-
 
NC_010172  Mext_1018  short-chain dehydrogenase/reductase SDR  75.52 
 
 
285 aa  453  1.0000000000000001e-126  Methylobacterium extorquens PA1  Bacteria  normal  0.136189  normal 
 
 
-
 
NC_009428  Rsph17025_2997  short-chain dehydrogenase/reductase SDR  73.43 
 
 
285 aa  440  9.999999999999999e-123  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.402229  normal  0.230445 
 
 
-
 
NC_011988  Avi_5588  dehydrogenase  71.68 
 
 
285 aa  431  1e-120  Agrobacterium vitis S4  Bacteria  normal  0.861783  n/a   
 
 
-
 
NC_009049  Rsph17029_2578  short-chain dehydrogenase/reductase SDR  71.68 
 
 
285 aa  431  1e-120  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.319892  normal  0.963036 
 
 
-
 
NC_007493  RSP_0919  Short-chain dehydrogenase/reductase SDR  71.33 
 
 
285 aa  429  1e-119  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1317  Short-chain dehydrogenase  71.99 
 
 
288 aa  428  1e-119  Burkholderia xenovorans LB400  Bacteria  normal  0.169913  normal  0.0434292 
 
 
-
 
NC_012858  Rleg_6701  short-chain dehydrogenase/reductase SDR  68.18 
 
 
285 aa  418  1e-116  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.539155  normal  0.142405 
 
 
-
 
NC_011366  Rleg2_5800  short-chain dehydrogenase/reductase SDR  68.88 
 
 
285 aa  420  1e-116  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0775551 
 
 
-
 
NC_010681  Bphyt_2025  short-chain dehydrogenase/reductase SDR  70.21 
 
 
288 aa  417  9.999999999999999e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  hitchhiker  0.000209901 
 
 
-
 
NC_007406  Nwi_2662  short-chain dehydrogenase/reductase SDR  69.01 
 
 
286 aa  410  1e-114  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.392241  normal 
 
 
-
 
NC_009620  Smed_4064  short-chain dehydrogenase/reductase SDR  69.23 
 
 
285 aa  412  1e-114  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1505  Short-chain dehydrogenase/reductase SDR  68.2 
 
 
286 aa  409  1e-113  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.412824 
 
 
-
 
NC_007925  RPC_1231  short-chain dehydrogenase/reductase SDR  66.08 
 
 
285 aa  408  1e-113  Rhodopseudomonas palustris BisB18  Bacteria  normal  hitchhiker  0.0000245222 
 
 
-
 
NC_011004  Rpal_2362  short-chain dehydrogenase/reductase SDR  65.72 
 
 
286 aa  396  1e-109  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.453828  n/a   
 
 
-
 
NC_010581  Bind_2992  short-chain dehydrogenase/reductase SDR  64.69 
 
 
285 aa  388  1e-107  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4750  short-chain dehydrogenase/reductase SDR  64.21 
 
 
288 aa  390  1e-107  Burkholderia phymatum STM815  Bacteria  normal  0.306467  normal  0.765133 
 
 
-
 
NC_008752  Aave_4486  short-chain dehydrogenase/reductase SDR  64.66 
 
 
292 aa  387  1e-107  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0684702 
 
 
-
 
NC_013730  Slin_5292  short-chain dehydrogenase/reductase SDR  67.04 
 
 
300 aa  387  1e-106  Spirosoma linguale DSM 74  Bacteria  normal  0.319997  normal  0.350002 
 
 
-
 
NC_009668  Oant_4304  short-chain dehydrogenase/reductase SDR  63.6 
 
 
311 aa  384  1e-106  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2695  Short-chain dehydrogenase/reductase SDR  61.89 
 
 
285 aa  379  1e-104  Pseudomonas fluorescens Pf0-1  Bacteria  normal  hitchhiker  0.00727931 
 
 
-
 
NC_014210  Ndas_1784  short-chain dehydrogenase/reductase SDR  66.79 
 
 
280 aa  375  1e-103  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.348942  normal  0.531836 
 
 
-
 
NC_007005  Psyr_2411  Short-chain dehydrogenase/reductase SDR  61.97 
 
 
286 aa  373  1e-102  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_1134  short-chain dehydrogenase/reductase SDR  62.94 
 
 
285 aa  370  1e-101  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2677  oxidoreductase, short chain dehydrogenase/reductase family  61.27 
 
 
286 aa  366  1e-100  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.822958  n/a   
 
 
-
 
NC_013757  Gobs_3064  short-chain dehydrogenase/reductase SDR  62.41 
 
 
285 aa  362  3e-99  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.638488  n/a   
 
 
-
 
NC_010322  PputGB1_3001  short-chain dehydrogenase/reductase SDR  60.14 
 
 
285 aa  362  5.0000000000000005e-99  Pseudomonas putida GB-1  Bacteria  normal  0.798039  normal 
 
 
-
 
NC_009512  Pput_3031  short-chain dehydrogenase/reductase SDR  60.14 
 
 
285 aa  359  3e-98  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2723  short chain dehydrogenase/reductase family oxidoreductase  59.79 
 
 
285 aa  358  5e-98  Pseudomonas putida KT2440  Bacteria  normal  0.612253  normal 
 
 
-
 
NC_013061  Phep_2635  short-chain dehydrogenase/reductase SDR  60.28 
 
 
298 aa  349  3e-95  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.795136 
 
 
-
 
NC_012853  Rleg_5613  short-chain dehydrogenase/reductase SDR  59.57 
 
 
288 aa  347  1e-94  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.207761 
 
 
-
 
NC_010501  PputW619_2859  short-chain dehydrogenase/reductase SDR  58.04 
 
 
285 aa  340  2e-92  Pseudomonas putida W619  Bacteria  normal  0.170147  normal  0.262214 
 
 
-
 
NC_011145  AnaeK_2906  short-chain dehydrogenase/reductase SDR  59.79 
 
 
295 aa  338  9e-92  Anaeromyxobacter sp. K  Bacteria  normal  0.0346785  n/a   
 
 
-
 
NC_007760  Adeh_2818  short-chain dehydrogenase/reductase SDR  59.79 
 
 
295 aa  337  9.999999999999999e-92  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3986  short-chain dehydrogenase/reductase SDR  59.72 
 
 
297 aa  335  3.9999999999999995e-91  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3000  short-chain dehydrogenase/reductase SDR  59.07 
 
 
295 aa  333  2e-90  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.546475  n/a   
 
 
-
 
NC_009675  Anae109_2764  short-chain dehydrogenase/reductase SDR  57.65 
 
 
293 aa  332  3e-90  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.133433  normal 
 
 
-
 
NC_009664  Krad_2810  short-chain dehydrogenase/reductase SDR  57.86 
 
 
298 aa  332  4e-90  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4720  short-chain dehydrogenase/reductase SDR  54.01 
 
 
290 aa  325  6e-88  Methylobacterium populi BJ001  Bacteria  normal  decreased coverage  0.00355451 
 
 
-
 
NC_011757  Mchl_4573  short-chain dehydrogenase/reductase SDR  53.66 
 
 
290 aa  321  7e-87  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0102101 
 
 
-
 
NC_010172  Mext_4203  short-chain dehydrogenase/reductase SDR  53.66 
 
 
290 aa  320  9.999999999999999e-87  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.424888 
 
 
-
 
NC_008541  Arth_1065  short-chain dehydrogenase/reductase SDR  56.58 
 
 
297 aa  319  3e-86  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0060  short-chain dehydrogenase/reductase SDR  56.99 
 
 
293 aa  319  3.9999999999999996e-86  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.116516  normal  0.834143 
 
 
-
 
NC_010505  Mrad2831_1999  short-chain dehydrogenase/reductase SDR  53.17 
 
 
291 aa  317  1e-85  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.791141  normal  0.178884 
 
 
-
 
NC_010505  Mrad2831_3745  short-chain dehydrogenase/reductase SDR  54.06 
 
 
292 aa  315  4e-85  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.082877 
 
 
-
 
NC_014151  Cfla_3237  short-chain dehydrogenase/reductase SDR  55.52 
 
 
308 aa  310  2e-83  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.278854  normal  0.143787 
 
 
-
 
NC_007413  Ava_2428  Short-chain dehydrogenase/reductase SDR  54.89 
 
 
285 aa  310  2.9999999999999997e-83  Anabaena variabilis ATCC 29413  Bacteria  normal  hitchhiker  0.00441007 
 
 
-
 
NC_013172  Bfae_19840  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like  55.79 
 
 
297 aa  308  5.9999999999999995e-83  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_4034  short-chain dehydrogenase/reductase SDR  54.45 
 
 
335 aa  306  4.0000000000000004e-82  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.0000556089  normal 
 
 
-
 
NC_009972  Haur_2365  short-chain dehydrogenase/reductase SDR  53.24 
 
 
288 aa  305  5.0000000000000004e-82  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000784864  n/a   
 
 
-
 
NC_010087  Bmul_5540  short-chain dehydrogenase/reductase SDR  56.23 
 
 
333 aa  305  8.000000000000001e-82  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.752467  normal  0.0103168 
 
 
-
 
NC_010512  Bcenmc03_6190  short-chain dehydrogenase/reductase SDR  55.87 
 
 
335 aa  302  5.000000000000001e-81  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4376  Short-chain dehydrogenase/reductase SDR  53.07 
 
 
285 aa  301  7.000000000000001e-81  Ralstonia eutropha JMP134  Bacteria  normal  0.896027  n/a   
 
 
-
 
NC_012853  Rleg_5903  short-chain dehydrogenase/reductase SDR  52.67 
 
 
333 aa  300  2e-80  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.828162  normal 
 
 
-
 
NC_011729  PCC7424_1059  short-chain dehydrogenase/reductase SDR  53.58 
 
 
284 aa  300  2e-80  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.102631 
 
 
-
 
NC_013132  Cpin_3131  short-chain dehydrogenase/reductase SDR  51.96 
 
 
340 aa  299  4e-80  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.395332  normal  0.413116 
 
 
-
 
NC_007614  Nmul_A1180  Short-chain dehydrogenase/reductase SDR  51.43 
 
 
293 aa  298  5e-80  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0727781  n/a   
 
 
-
 
NC_009441  Fjoh_2643  short-chain dehydrogenase/reductase SDR  50.35 
 
 
334 aa  296  2e-79  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_2288  short-chain dehydrogenase/reductase SDR  54.09 
 
 
306 aa  295  6e-79  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1246  short-chain dehydrogenase/reductase SDR  56.77 
 
 
335 aa  294  1e-78  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.927114  n/a   
 
 
-
 
NC_008544  Bcen2424_6586  short-chain dehydrogenase/reductase SDR  56.77 
 
 
335 aa  294  1e-78  Burkholderia cenocepacia HI2424  Bacteria  normal  0.830153  normal 
 
 
-
 
NC_013132  Cpin_0994  short-chain dehydrogenase/reductase SDR  54.14 
 
 
288 aa  293  3e-78  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_17140  dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein  53.74 
 
 
307 aa  292  5e-78  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.391545  normal 
 
 
-
 
NC_007484  Noc_0460  short chain dehydrogenase  51.07 
 
 
291 aa  292  5e-78  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0632  short chain dehydrogenase  50 
 
 
288 aa  292  5e-78  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.000000680928  n/a   
 
 
-
 
NC_012803  Mlut_22650  short-chain alcohol dehydrogenase like protein  52.94 
 
 
306 aa  291  8e-78  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1292  Short-chain dehydrogenase/reductase SDR  51.25 
 
 
339 aa  290  3e-77  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2307  short-chain dehydrogenase/reductase SDR  52.31 
 
 
292 aa  289  3e-77  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.381228  normal 
 
 
-
 
NC_013411  GYMC61_1520  short-chain dehydrogenase/reductase SDR  50 
 
 
287 aa  288  8e-77  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012857  Rpic12D_3818  short-chain dehydrogenase/reductase SDR  51.44 
 
 
286 aa  288  9e-77  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4895  short-chain dehydrogenase/reductase SDR  51.44 
 
 
286 aa  288  9e-77  Ralstonia pickettii 12J  Bacteria  normal  normal  0.317832 
 
 
-
 
NC_008146  Mmcs_1277  short-chain dehydrogenase/reductase SDR  53.31 
 
 
285 aa  288  1e-76  Mycobacterium sp. MCS  Bacteria  normal  0.716847  n/a   
 
 
-
 
NC_011884  Cyan7425_3474  short-chain dehydrogenase/reductase SDR  51.5 
 
 
285 aa  288  1e-76  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.345409 
 
 
-
 
NC_008705  Mkms_1294  short-chain dehydrogenase/reductase SDR  53.31 
 
 
285 aa  288  1e-76  Mycobacterium sp. KMS  Bacteria  normal  normal  0.110576 
 
 
-
 
NC_013730  Slin_5467  short-chain dehydrogenase/reductase SDR  50.56 
 
 
305 aa  286  2e-76  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0121  short-chain dehydrogenase/reductase SDR  52.45 
 
 
286 aa  286  2e-76  Geobacter sp. M21  Bacteria  n/a    normal  0.984934 
 
 
-
 
NC_011146  Gbem_0138  short-chain dehydrogenase/reductase SDR  52.45 
 
 
286 aa  286  4e-76  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0756  twin-arginine translocation pathway signal  51.6 
 
 
328 aa  285  5.999999999999999e-76  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.98283  n/a   
 
 
-
 
NC_008542  Bcen2424_1237  short-chain dehydrogenase/reductase SDR  51.6 
 
 
328 aa  285  5.999999999999999e-76  Burkholderia cenocepacia HI2424  Bacteria  normal  0.688283  n/a   
 
 
-
 
NC_009485  BBta_3897  oxidoreductase NAD(P)-binding subunit  50.71 
 
 
294 aa  285  5.999999999999999e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0706  short-chain dehydrogenase/reductase SDR  50 
 
 
287 aa  285  7e-76  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_11090  Short-chain dehydrogenase/reductase  51.7 
 
 
286 aa  285  7e-76  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1210  short-chain dehydrogenase/reductase SDR  51.6 
 
 
337 aa  285  8e-76  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5938  oxidoreductase NAD(P)-binding subunit  70.27 
 
 
206 aa  285  8e-76  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_36870  putative short-chain dehydrogenase  52.08 
 
 
286 aa  284  9e-76  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1306  short-chain dehydrogenase/reductase SDR  52.57 
 
 
285 aa  284  1.0000000000000001e-75  Mycobacterium sp. JLS  Bacteria  normal  0.603842  normal 
 
 
-
 
NC_011886  Achl_0243  short-chain dehydrogenase/reductase SDR  50.9 
 
 
304 aa  284  1.0000000000000001e-75  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_008726  Mvan_4753  short-chain dehydrogenase/reductase SDR  51.84 
 
 
284 aa  284  1.0000000000000001e-75  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.163262  normal  0.97721 
 
 
-
 
NC_008228  Patl_0912  short-chain dehydrogenase/reductase SDR  50.37 
 
 
299 aa  283  2.0000000000000002e-75  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0261  short-chain dehydrogenase/reductase SDR  50 
 
 
285 aa  281  9e-75  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.566144  normal 
 
 
-
 
NC_006274  BCZK0655  short chain dehydrogenase  49.81 
 
 
288 aa  280  2e-74  Bacillus cereus E33L  Bacteria  hitchhiker  0.000332724  n/a   
 
 
-
 
NC_009664  Krad_0828  short-chain dehydrogenase/reductase SDR  51.09 
 
 
297 aa  280  2e-74  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1963  short-chain dehydrogenase/reductase SDR  52.21 
 
 
284 aa  280  2e-74  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.757824  normal  0.126466 
 
 
-
 
NC_009621  Smed_5297  short chain dehydrogenase  49.29 
 
 
317 aa  279  3e-74  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.460339 
 
 
-
 
NC_003909  BCE_0818  short chain dehydrogenase  48.68 
 
 
288 aa  278  6e-74  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2744  short chain dehydrogenase  51.08 
 
 
334 aa  278  6e-74  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.972914  normal  0.0520687 
 
 
-
 
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