179 homologs were found in PanDaTox collection
for query gene Lreu_1681 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009513  Lreu_1681  branched-chain amino acid transport system II carrier protein  100 
 
 
450 aa  896    Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0050  branched-chain amino acid permease  48.09 
 
 
454 aa  427  1e-118  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.0000000000377191  normal 
 
 
-
 
NC_008530  LGAS_0948  branched-chain amino acid permease  50 
 
 
475 aa  422  1e-117  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_009513  Lreu_1811  branched-chain amino acid transport system II carrier protein  47.99 
 
 
461 aa  412  1e-114  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000000231514  n/a   
 
 
-
 
NC_009487  SaurJH9_0171  branched-chain amino acid transport system II carrier protein  42.12 
 
 
449 aa  348  2e-94  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0176  branched-chain amino acid transport system II carrier protein  42.12 
 
 
449 aa  348  2e-94  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0443  branched-chain amino acid permease  39.2 
 
 
482 aa  323  3e-87  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2363  branched-chain amino acid transport system II carrier protein  40.22 
 
 
452 aa  323  4e-87  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1440  branched-chain amino acid permease  40.67 
 
 
450 aa  316  4e-85  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_008527  LACR_0712  branched-chain amino acid permease  42.08 
 
 
449 aa  310  4e-83  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.0751355  n/a   
 
 
-
 
NC_005957  BT9727_1751  branched-chain amino acid transport system carrier protein  38.1 
 
 
452 aa  289  6e-77  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  1.04073e-17  n/a   
 
 
-
 
NC_006274  BCZK1729  branched-chain amino acid transport system carrier protein  38.1 
 
 
452 aa  288  1e-76  Bacillus cereus E33L  Bacteria  hitchhiker  0.0000468898  n/a   
 
 
-
 
NC_012803  Mlut_15150  branched-chain amino acid uptake carrier  39.91 
 
 
464 aa  287  2e-76  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0196  branched-chain amino acid transport system II carrier protein  37.24 
 
 
523 aa  284  2.0000000000000002e-75  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_1994  branched-chain amino acid transport system II carrier protein  39.23 
 
 
452 aa  282  9e-75  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000216802  n/a   
 
 
-
 
NC_011725  BCB4264_A1915  branched-chain amino acid transport system II carrier protein  38.18 
 
 
452 aa  281  2e-74  Bacillus cereus B4264  Bacteria  normal  0.0189448  n/a   
 
 
-
 
NC_011658  BCAH187_A2016  branched-chain amino acid transport system II carrier protein  39.23 
 
 
452 aa  281  2e-74  Bacillus cereus AH187  Bacteria  unclonable  0.0000000186213  n/a   
 
 
-
 
NC_011773  BCAH820_1945  branched-chain amino acid transport system II carrier protein  38.1 
 
 
452 aa  280  3e-74  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.15478e-28 
 
 
-
 
NC_011772  BCG9842_B3429  branched-chain amino acid transport system II carrier protein  39.23 
 
 
452 aa  280  3e-74  Bacillus cereus G9842  Bacteria  hitchhiker  0.000169589  hitchhiker  0.000000128434 
 
 
-
 
NC_010184  BcerKBAB4_1773  branched-chain amino acid transport system II carrier protein  39.2 
 
 
452 aa  279  6e-74  Bacillus weihenstephanensis KBAB4  Bacteria  unclonable  0.00000130057  n/a   
 
 
-
 
NC_013169  Ksed_14620  branched-chain amino acid uptake carrier  37.92 
 
 
461 aa  274  2.0000000000000002e-72  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.72122  normal  0.302193 
 
 
-
 
NC_005945  BAS2920  branched-chain amino acid transport system II carrier protein  35.73 
 
 
450 aa  255  1.0000000000000001e-66  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3142  branched chain amino acid ABC transporter carrier protein  35.73 
 
 
450 aa  255  1.0000000000000001e-66  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.569946  n/a   
 
 
-
 
NC_009674  Bcer98_1161  branched-chain amino acid transport system II carrier protein  36.53 
 
 
451 aa  253  4.0000000000000004e-66  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.328055  n/a   
 
 
-
 
NC_011773  BCAH820_3153  branched-chain amino acid transport system II carrier protein  35.49 
 
 
450 aa  251  1e-65  Bacillus cereus AH820  Bacteria  n/a    normal  0.611345 
 
 
-
 
NC_005957  BT9727_2898  branched-chain amino acid transport system carrier protein  35.25 
 
 
450 aa  245  9.999999999999999e-64  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  0.00345664  n/a   
 
 
-
 
NC_009714  CHAB381_1182  branched-chain amino acid transport system II carrier protein  34.69 
 
 
440 aa  238  2e-61  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3254  branched-chain amino acid transport system II carrier protein  33.85 
 
 
450 aa  236  7e-61  Bacillus cereus G9842  Bacteria  normal  0.104949  normal  0.486135 
 
 
-
 
NC_005957  BT9727_1324  branched-chain amino acid transport protein  37.76 
 
 
451 aa  233  4.0000000000000004e-60  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000172075  n/a   
 
 
-
 
NC_011725  BCB4264_A2053  branched-chain amino acid transport system II carrier protein  34.07 
 
 
450 aa  233  4.0000000000000004e-60  Bacillus cereus B4264  Bacteria  normal  0.087988  n/a   
 
 
-
 
NC_011658  BCAH187_A1603  branched-chain amino acid transport system II carrier protein  37.53 
 
 
451 aa  232  1e-59  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000188549  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1913  branched-chain amino acid transport system II carrier protein  34.85 
 
 
450 aa  232  1e-59  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0827616  n/a   
 
 
-
 
NC_011658  BCAH187_A2163  branched-chain amino acid transport system II carrier protein  32.6 
 
 
450 aa  231  1e-59  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1533  branched-chain amino acid transport system II carrier protein  37.53 
 
 
451 aa  231  1e-59  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.93507e-19 
 
 
-
 
NC_005945  BAS1350  branched-chain amino acid transport system II carrier protein  37.53 
 
 
451 aa  231  2e-59  Bacillus anthracis str. Sterne  Bacteria  normal  0.0128918  n/a   
 
 
-
 
NC_006274  BCZK1323  branched-chain amino acid transport protein  37.53 
 
 
451 aa  231  2e-59  Bacillus cereus E33L  Bacteria  decreased coverage  0.00120773  n/a   
 
 
-
 
NC_007530  GBAA_1459  branched chain amino acid ABC transporter carrier protein  37.53 
 
 
451 aa  231  2e-59  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.210353  n/a   
 
 
-
 
NC_009674  Bcer98_1551  branched-chain amino acid transport system II carrier protein  33.11 
 
 
465 aa  230  4e-59  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.818102  n/a   
 
 
-
 
NC_003909  BCE_1565  branched-chain amino acid transport system II carrier protein  37.53 
 
 
451 aa  230  5e-59  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00000310033  n/a   
 
 
-
 
NC_008599  CFF8240_1152  branched-chain amino acid transport system II carrier protein  32.35 
 
 
434 aa  229  5e-59  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.291372  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1365  branched-chain amino acid transport system II carrier protein  36.83 
 
 
451 aa  228  1e-58  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00132143  n/a   
 
 
-
 
NC_011725  BCB4264_A1497  branched-chain amino acid transport system II carrier protein  37.38 
 
 
451 aa  228  2e-58  Bacillus cereus B4264  Bacteria  unclonable  0.0000870089  n/a   
 
 
-
 
NC_009656  PSPA7_3684  branched chain amino acid ABC transporter  40.05 
 
 
548 aa  228  2e-58  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1869  branched-chain amino acid transport system carrier protein  33.04 
 
 
448 aa  227  3e-58  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3847  branched-chain amino acid transport system II carrier protein  37.06 
 
 
448 aa  226  5.0000000000000005e-58  Bacillus cereus G9842  Bacteria  hitchhiker  0.00000203183  hitchhiker  0.00000000239284 
 
 
-
 
NC_008261  CPF_0392  branched-chain amino acid transport system II carrier protein  34.52 
 
 
445 aa  226  5.0000000000000005e-58  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1916  branched-chain amino acid transport system II carrier protein  33.04 
 
 
448 aa  226  7e-58  Bacillus anthracis str. Sterne  Bacteria  normal  0.377142  n/a   
 
 
-
 
NC_005957  BT9727_1878  branched-chain amino acid transport system carrier protein  33.04 
 
 
448 aa  225  1e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.343185  n/a   
 
 
-
 
NC_011773  BCAH820_2095  branched-chain amino acid transport system II carrier protein  33.04 
 
 
450 aa  225  1e-57  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008262  CPR_0388  branched-chain amino acid transport system II carrier protein  34.04 
 
 
445 aa  224  3e-57  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2270  branched-chain amino acid transport system II carrier protein  34.32 
 
 
437 aa  224  3e-57  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000000000730131  n/a   
 
 
-
 
NC_012793  GWCH70_3188  branched-chain amino acid transport system II carrier protein  33.33 
 
 
436 aa  224  4e-57  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.00000000414074  n/a   
 
 
-
 
NC_008463  PA14_43920  branched chain amino acid transporter  39.51 
 
 
437 aa  222  9.999999999999999e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_2063  branched chain amino acid ABC transporter carrier protein  32.82 
 
 
445 aa  221  1.9999999999999999e-56  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0560  branched chain amino acid transport system II carrier protein  32.94 
 
 
437 aa  220  5e-56  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG1636  branched-chain amino acid transport system II carrier protein  33.33 
 
 
455 aa  218  2e-55  Streptococcus agalactiae 2603V/R  Bacteria  unclonable  0.000213191  n/a   
 
 
-
 
NC_003909  BCE_2133  branched-chain amino acid transport system II carrier protein  35.18 
 
 
360 aa  214  1.9999999999999998e-54  Bacillus cereus ATCC 10987  Bacteria  normal  0.773417  n/a   
 
 
-
 
NC_009457  VC0395_A0193  branched chain amino acid transport system II carrier protein  32.88 
 
 
437 aa  213  4.9999999999999996e-54  Vibrio cholerae O395  Bacteria  normal  0.820087  n/a   
 
 
-
 
NC_009783  VIBHAR_00954  hypothetical protein  31.33 
 
 
473 aa  212  1e-53  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0856  branched-chain amino acid transport system II carrier protein  34.03 
 
 
438 aa  210  3e-53  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1435  branched-chain amino acid transport system II carrier protein  34.86 
 
 
420 aa  211  3e-53  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000424202  n/a   
 
 
-
 
NC_013456  VEA_004443  branched-chain amino acid transport system carrier protein  33.73 
 
 
436 aa  211  3e-53  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1589  branched-chain amino acid transport system II carrier protein  32.87 
 
 
447 aa  210  5e-53  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0715  branched-chain amino acid transport system II carrier protein  34.07 
 
 
438 aa  210  5e-53  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000614247  n/a   
 
 
-
 
NC_011658  BCAH187_A0966  branched-chain amino acid transport system II carrier protein  34.49 
 
 
438 aa  209  7e-53  Bacillus cereus AH187  Bacteria  unclonable  0.0000000062732  n/a   
 
 
-
 
NC_009656  PSPA7_3325  branched-chain amino acid transport system II carrier protein  33.33 
 
 
437 aa  209  8e-53  Pseudomonas aeruginosa PA7  Bacteria  normal  0.106259  n/a   
 
 
-
 
NC_009439  Pmen_2498  branched-chain amino acid transport system II carrier protein  37.73 
 
 
437 aa  208  1e-52  Pseudomonas mendocina ymp  Bacteria  normal  0.331302  normal  0.203368 
 
 
-
 
NC_009674  Bcer98_3237  branched-chain amino acid transport system II carrier protein  34.07 
 
 
443 aa  207  3e-52  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.188718  n/a   
 
 
-
 
NC_006274  BCZK0700  branched-chain amino acid transport protein  34.26 
 
 
438 aa  206  5e-52  Bacillus cereus E33L  Bacteria  hitchhiker  0.000173599  n/a   
 
 
-
 
NC_012917  PC1_1012  branched-chain amino acid transport system II carrier protein  33.26 
 
 
439 aa  206  5e-52  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_39050  branched-chain amino acid transport carrier  33.33 
 
 
437 aa  206  6e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.379222  normal  0.362487 
 
 
-
 
NC_007492  Pfl01_1619  branched chain amino acid ABC transporter carrier protein  32.96 
 
 
437 aa  206  9e-52  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.758971  normal  0.0622571 
 
 
-
 
NC_005957  BT9727_0713  branched-chain amino acid transport protein  34.66 
 
 
438 aa  204  2e-51  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  unclonable  2.39316e-17  n/a   
 
 
-
 
NC_012912  Dd1591_3102  branched-chain amino acid transport system II carrier protein  32.65 
 
 
440 aa  205  2e-51  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4673  branched-chain amino acid transport system II carrier protein  34.32 
 
 
441 aa  204  3e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4480  branched-chain amino acid transport system II carrier protein  34.38 
 
 
438 aa  203  4e-51  Bacillus cereus G9842  Bacteria  normal  normal  0.137842 
 
 
-
 
NC_003909  BCE_0894  branched-chain amino acid transport system II carrier protein  33.96 
 
 
438 aa  203  6e-51  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000586309  n/a   
 
 
-
 
NC_004116  SAG1556  branched-chain amino acid transport system II carrier protein  36.13 
 
 
445 aa  202  7e-51  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.752618  n/a   
 
 
-
 
NC_012880  Dd703_2911  branched-chain amino acid transport system II carrier protein  32.56 
 
 
439 aa  202  7e-51  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0842  branched-chain amino acid transport system II carrier protein  32.06 
 
 
466 aa  202  8e-51  Shewanella baltica OS155  Bacteria  normal  0.809943  n/a   
 
 
-
 
NC_005945  BAS0765  branched-chain amino acid transport system II carrier protein  35.43 
 
 
438 aa  202  9.999999999999999e-51  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000513379  n/a   
 
 
-
 
NC_007530  GBAA_0802  branched chain amino acid ABC transporter carrier protein  35.43 
 
 
438 aa  202  9.999999999999999e-51  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00000000325233  n/a   
 
 
-
 
NC_011663  Sbal223_3450  branched-chain amino acid transport system II carrier protein  32.53 
 
 
470 aa  202  9.999999999999999e-51  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_0898  branched-chain amino acid transport system II carrier protein  35 
 
 
438 aa  202  9.999999999999999e-51  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.00389e-42 
 
 
-
 
NC_009997  Sbal195_3644  branched-chain amino acid transport system II carrier protein  32.53 
 
 
470 aa  201  1.9999999999999998e-50  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3298  branched-chain amino acid transport system II carrier protein  33.72 
 
 
439 aa  201  1.9999999999999998e-50  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3525  branched-chain amino acid transport system II carrier protein  32.53 
 
 
470 aa  201  1.9999999999999998e-50  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_1461  branched-chain amino acid transport system II carrier protein  31.44 
 
 
435 aa  201  1.9999999999999998e-50  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_0662  branched-chain amino acid transport system II carrier protein  32.51 
 
 
438 aa  201  3e-50  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0432  branched-chain amino acid transport system II carrier protein  33.03 
 
 
439 aa  199  6e-50  Escherichia coli SMS-3-5  Bacteria  normal  0.922576  normal 
 
 
-
 
NC_009092  Shew_0769  branched-chain amino acid transport system II carrier protein  31.07 
 
 
443 aa  199  7.999999999999999e-50  Shewanella loihica PV-4  Bacteria  normal  0.949455  normal  0.0746903 
 
 
-
 
CP001509  ECD_00349  predicted branched chain amino acid transporter (LIV-II)  32.8 
 
 
439 aa  199  9e-50  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3208  branched-chain amino acid transport system II carrier protein  32.8 
 
 
439 aa  199  9e-50  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0478  branched-chain amino acid transport system II carrier protein  32.8 
 
 
439 aa  199  9e-50  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.709941  normal 
 
 
-
 
NC_010658  SbBS512_E0320  branched-chain amino acid transport system II carrier protein  32.8 
 
 
439 aa  199  9e-50  Shigella boydii CDC 3083-94  Bacteria  normal  0.259108  n/a   
 
 
-
 
NC_012892  B21_00353  hypothetical protein  32.8 
 
 
439 aa  199  9e-50  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3232  branched-chain amino acid transport system II carrier protein  32.8 
 
 
439 aa  199  9e-50  Escherichia coli ATCC 8739  Bacteria  normal  0.686325  unclonable  0.0000000117832 
 
 
-
 
NC_009800  EcHS_A0471  branched-chain amino acid transport system II carrier protein  32.8 
 
 
439 aa  199  9e-50  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0431  branched-chain amino acid transport system II carrier protein  32.8 
 
 
439 aa  199  9e-50  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1045  branched-chain amino acid transport system II carrier protein  32.97 
 
 
439 aa  199  1.0000000000000001e-49  Serratia proteamaculans 568  Bacteria  normal  0.864553  normal  0.21687 
 
 
-
 
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