More than 300 homologs were found in PanDaTox collection
for query gene Lferr_2621 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011761  AFE_3014  oxidoreductase, short-chain dehydrogenase/reductase family  99.55 
 
 
257 aa  458  9.999999999999999e-129  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.698047  n/a   
 
 
-
 
NC_011206  Lferr_2621  short-chain dehydrogenase/reductase SDR  100 
 
 
223 aa  457  9.999999999999999e-129  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3914  short-chain dehydrogenase/reductase SDR  57.92 
 
 
258 aa  261  4e-69  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2618  short-chain dehydrogenase/reductase SDR  54.5 
 
 
260 aa  248  6e-65  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1537  short-chain dehydrogenase/reductase SDR  48.2 
 
 
255 aa  211  5.999999999999999e-54  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I1339  short chain dehydrogenase/reductase family oxidoreductase  42.47 
 
 
261 aa  177  1e-43  Burkholderia thailandensis E264  Bacteria  normal  0.789963  n/a   
 
 
-
 
NC_006348  BMA2291  short chain dehydrogenase/reductase family oxidoreductase  39.82 
 
 
262 aa  176  3e-43  Burkholderia mallei ATCC 23344  Bacteria  normal  0.448302  n/a   
 
 
-
 
NC_009080  BMA10247_2168  short chain dehydrogenase/reductase family oxidoreductase  39.82 
 
 
262 aa  176  3e-43  Burkholderia mallei NCTC 10247  Bacteria  normal  0.408948  n/a   
 
 
-
 
NC_007434  BURPS1710b_3288  short chain dehydrogenase/reductase family oxidoreductase  39.82 
 
 
262 aa  176  3e-43  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3273  short chain dehydrogenase/reductase family oxidoreductase  39.82 
 
 
262 aa  176  3e-43  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0537  short chain dehydrogenase/reductase family oxidoreductase  39.82 
 
 
262 aa  176  3e-43  Burkholderia mallei SAVP1  Bacteria  normal  0.618923  n/a   
 
 
-
 
NC_008836  BMA10229_A1063  short chain dehydrogenase/reductase family oxidoreductase  39.82 
 
 
262 aa  176  3e-43  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3237  short chain dehydrogenase/reductase family oxidoreductase  39.37 
 
 
262 aa  172  1.9999999999999998e-42  Burkholderia pseudomallei 668  Bacteria  normal  0.85457  n/a   
 
 
-
 
NC_010508  Bcenmc03_0749  short-chain dehydrogenase/reductase SDR  39.27 
 
 
261 aa  169  3e-41  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0780  short-chain dehydrogenase/reductase SDR  38.46 
 
 
251 aa  167  1e-40  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008060  Bcen_0297  short-chain dehydrogenase/reductase SDR  38.46 
 
 
236 aa  167  2e-40  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.450899  n/a   
 
 
-
 
NC_010682  Rpic_1148  short-chain dehydrogenase/reductase SDR  38.36 
 
 
261 aa  159  2e-38  Ralstonia pickettii 12J  Bacteria  normal  0.0372396  normal 
 
 
-
 
NC_007510  Bcep18194_A3871  Short-chain dehydrogenase/reductase SDR  38.38 
 
 
263 aa  154  1e-36  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0427  Short-chain dehydrogenase/reductase SDR  41.67 
 
 
256 aa  150  2e-35  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0286  short-chain dehydrogenase/reductase SDR  36.61 
 
 
267 aa  146  3e-34  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0946  short-chain dehydrogenase/reductase SDR  41.78 
 
 
255 aa  143  2e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.841301 
 
 
-
 
NC_011666  Msil_1220  short-chain dehydrogenase/reductase SDR  35.62 
 
 
267 aa  135  4e-31  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0396452 
 
 
-
 
NC_010725  Mpop_2467  short-chain dehydrogenase/reductase SDR  37.95 
 
 
255 aa  112  4.0000000000000004e-24  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0928322 
 
 
-
 
NC_011757  Mchl_2762  short-chain dehydrogenase/reductase SDR  40 
 
 
255 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.836425  normal  0.228083 
 
 
-
 
NC_010172  Mext_2539  short-chain dehydrogenase/reductase SDR  38.97 
 
 
275 aa  107  1e-22  Methylobacterium extorquens PA1  Bacteria  normal  0.0247795  normal 
 
 
-
 
NC_011365  Gdia_3539  short-chain dehydrogenase/reductase SDR  34.9 
 
 
271 aa  107  1e-22  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0320  short-chain dehydrogenase/reductase SDR  41.18 
 
 
257 aa  105  7e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.25395  normal 
 
 
-
 
NC_011894  Mnod_1942  short-chain dehydrogenase/reductase SDR  40.23 
 
 
255 aa  104  8e-22  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.678089  n/a   
 
 
-
 
NC_011365  Gdia_1844  short-chain dehydrogenase/reductase SDR  35.81 
 
 
279 aa  103  2e-21  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.649512  normal 
 
 
-
 
NC_007575  Suden_1903  Short-chain dehydrogenase/reductase SDR  26.94 
 
 
242 aa  96.7  2e-19  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0085  gluconate 5-dehydrogenase  32.81 
 
 
256 aa  96.7  3e-19  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1398  short-chain dehydrogenase/reductase SDR  32.58 
 
 
249 aa  96.3  3e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.646056  n/a   
 
 
-
 
NC_009484  Acry_1727  short-chain dehydrogenase/reductase SDR  36.65 
 
 
265 aa  95.1  7e-19  Acidiphilium cryptum JF-5  Bacteria  normal  0.218017  n/a   
 
 
-
 
NC_007614  Nmul_A2453  short chain dehydrogenase  32.42 
 
 
261 aa  91.3  1e-17  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6048  short chain dehydrogenase  35.47 
 
 
266 aa  89.4  4e-17  Delftia acidovorans SPH-1  Bacteria  normal  0.549002  normal 
 
 
-
 
NC_007643  Rru_A0729  Short-chain dehydrogenase/reductase SDR  30.85 
 
 
259 aa  88.2  1e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.503076  n/a   
 
 
-
 
NC_007802  Jann_4017  short-chain dehydrogenase/reductase SDR  30.09 
 
 
245 aa  88.2  1e-16  Jannaschia sp. CCS1  Bacteria  normal  0.980517  normal 
 
 
-
 
NC_010505  Mrad2831_5451  short-chain dehydrogenase/reductase SDR  36.52 
 
 
281 aa  87  2e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.255746 
 
 
-
 
NC_008782  Ajs_4129  short chain dehydrogenase  34.5 
 
 
270 aa  85.9  4e-16  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3487  short chain dehydrogenase  34.5 
 
 
270 aa  85.5  6e-16  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_5291  short chain dehydrogenase  34.32 
 
 
260 aa  85.1  8e-16  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4895  short chain dehydrogenase  34.5 
 
 
258 aa  84.3  0.000000000000001  Polaromonas sp. JS666  Bacteria  hitchhiker  0.000739396  normal 
 
 
-
 
NC_008044  TM1040_0408  short-chain dehydrogenase/reductase SDR  33.79 
 
 
240 aa  84.7  0.000000000000001  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0959  Short-chain dehydrogenase/reductase SDR  33.89 
 
 
262 aa  82.4  0.000000000000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2754  short-chain dehydrogenase/reductase SDR  28.63 
 
 
275 aa  80.9  0.00000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.433019  n/a   
 
 
-
 
NC_008786  Veis_0151  short chain dehydrogenase  32.07 
 
 
261 aa  80.9  0.00000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10962  short chain dehydrogenase  32.3 
 
 
253 aa  80.1  0.00000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.247015 
 
 
-
 
NC_009636  Smed_1362  short-chain dehydrogenase/reductase SDR  31.79 
 
 
282 aa  80.5  0.00000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.390824  normal 
 
 
-
 
NC_007492  Pfl01_4738  Short-chain dehydrogenase/reductase SDR  33.17 
 
 
260 aa  79.7  0.00000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.9226  normal  0.284155 
 
 
-
 
NC_010622  Bphy_0185  short chain dehydrogenase  30.37 
 
 
256 aa  79.7  0.00000000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3371  short-chain dehydrogenase/reductase SDR  30 
 
 
239 aa  79.3  0.00000000000004  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3806  short chain dehydrogenase  30.4 
 
 
260 aa  79.3  0.00000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.187681 
 
 
-
 
NC_010506  Swoo_2775  short-chain dehydrogenase/reductase SDR  29.3 
 
 
238 aa  79  0.00000000000005  Shewanella woodyi ATCC 51908  Bacteria  normal  0.88847  normal  0.739494 
 
 
-
 
NC_008025  Dgeo_0458  short-chain dehydrogenase/reductase SDR  31.96 
 
 
257 aa  79  0.00000000000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.706164 
 
 
-
 
NC_012850  Rleg_1619  short-chain dehydrogenase/reductase SDR  40 
 
 
277 aa  78.6  0.00000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.44916 
 
 
-
 
NC_004578  PSPTO_1119  oxidoreductase, short chain dehydrogenase/reductase family  30.24 
 
 
262 aa  78.6  0.00000000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2964  short-chain dehydrogenase/reductase SDR  31.55 
 
 
260 aa  78.2  0.00000000000009  Acidovorax sp. JS42  Bacteria  normal  normal  0.166977 
 
 
-
 
NC_007908  Rfer_3312  short-chain dehydrogenase/reductase SDR  27.59 
 
 
260 aa  78.2  0.00000000000009  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2391  short-chain dehydrogenase/reductase SDR  31.55 
 
 
260 aa  77.8  0.0000000000001  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1059  short-chain dehydrogenase/reductase SDR  33.53 
 
 
300 aa  78.2  0.0000000000001  Thauera sp. MZ1T  Bacteria  normal  0.261261  n/a   
 
 
-
 
NC_009943  Dole_1249  short-chain dehydrogenase/reductase SDR  31.1 
 
 
273 aa  77.8  0.0000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0626824  n/a   
 
 
-
 
NC_010622  Bphy_2273  short chain dehydrogenase  28.32 
 
 
246 aa  77.8  0.0000000000001  Burkholderia phymatum STM815  Bacteria  normal  0.869936  normal  0.452458 
 
 
-
 
NC_007951  Bxe_A4248  short chain dehydrogenase  33.12 
 
 
259 aa  77.4  0.0000000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.215124 
 
 
-
 
NC_013131  Caci_3549  short-chain dehydrogenase/reductase SDR  29.3 
 
 
261 aa  77.4  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.32556  normal 
 
 
-
 
NC_008789  Hhal_1550  short-chain dehydrogenase/reductase SDR  31.05 
 
 
248 aa  76.6  0.0000000000002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1440  short-chain dehydrogenase/reductase SDR  40 
 
 
277 aa  77.4  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.313918 
 
 
-
 
NC_011761  AFE_3307  short chain dehydrogenase  33.65 
 
 
261 aa  76.3  0.0000000000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0864591  n/a   
 
 
-
 
NC_009668  Oant_2951  short chain dehydrogenase  25.21 
 
 
276 aa  76.6  0.0000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010085  Nmar_0044  short-chain dehydrogenase/reductase SDR  25.81 
 
 
264 aa  76.6  0.0000000000003  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal 
 
 
-
 
NC_011206  Lferr_2904  short chain dehydrogenase  33.65 
 
 
261 aa  76.3  0.0000000000003  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.000166666  decreased coverage  0.000436169 
 
 
-
 
NC_008740  Maqu_1484  short-chain dehydrogenase/reductase SDR  31.35 
 
 
260 aa  76.6  0.0000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.591298  n/a   
 
 
-
 
NC_008700  Sama_0813  short chain dehydrogenase/reductase family oxidoreductase  31.34 
 
 
253 aa  76.3  0.0000000000003  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1000  short-chain dehydrogenase/reductase SDR  30.66 
 
 
240 aa  76.3  0.0000000000003  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
BN001308  ANIA_09347  conserved hypothetical protein  36.96 
 
 
296 aa  76.3  0.0000000000004  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.395404 
 
 
-
 
NC_011679  PHATR_36881  2-deoxy-D-gluconate 3-dehydrogenase  30.46 
 
 
308 aa  76.3  0.0000000000004  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.804236  n/a   
 
 
-
 
NC_007348  Reut_B5157  Short-chain dehydrogenase/reductase SDR  28.57 
 
 
271 aa  76.3  0.0000000000004  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2941  short-chain dehydrogenase/reductase SDR  29.33 
 
 
245 aa  75.9  0.0000000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.19024  normal  0.201158 
 
 
-
 
NC_009439  Pmen_1069  short-chain dehydrogenase/reductase SDR  33.71 
 
 
251 aa  75.9  0.0000000000005  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1220  short chain dehydrogenase  28.64 
 
 
254 aa  75.9  0.0000000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0140677 
 
 
-
 
NC_008532  STER_1192  oxidoreductase, short chain dehydrogenase/reductase family  27.18 
 
 
255 aa  75.9  0.0000000000005  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_3063  short-chain dehydrogenase/reductase SDR  32.32 
 
 
248 aa  75.9  0.0000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.172179  normal  0.840489 
 
 
-
 
NC_011369  Rleg2_4295  short-chain dehydrogenase/reductase SDR  30.72 
 
 
244 aa  75.5  0.0000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0352  short chain dehydrogenase  32.34 
 
 
259 aa  75.1  0.0000000000007  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1974  short-chain dehydrogenase/reductase SDR  31.95 
 
 
258 aa  75.1  0.0000000000007  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2201  short-chain dehydrogenase/reductase SDR  32.16 
 
 
264 aa  75.1  0.0000000000008  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00796111  normal  0.121922 
 
 
-
 
NC_006348  BMA0087  short chain dehydrogenase  32.34 
 
 
259 aa  74.3  0.000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_15900  3-oxoacyl-(acyl-carrier-protein) reductase  33.61 
 
 
241 aa  74.3  0.000000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.166031  n/a   
 
 
-
 
NC_007434  BURPS1710b_0589  short chain dehydrogenase  32.34 
 
 
259 aa  74.3  0.000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_1087  short-chain dehydrogenase/reductase family protein  30.67 
 
 
245 aa  74.3  0.000000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.3765  n/a   
 
 
-
 
NC_013037  Dfer_3922  short-chain dehydrogenase/reductase SDR  30 
 
 
250 aa  74.3  0.000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1608  short-chain dehydrogenase/reductase SDR  39.82 
 
 
270 aa  74.7  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0626864  n/a   
 
 
-
 
NC_011071  Smal_1039  short-chain dehydrogenase/reductase SDR  32.33 
 
 
242 aa  74.3  0.000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.967418  normal 
 
 
-
 
NC_009074  BURPS668_0407  short chain dehydrogenase  32.34 
 
 
259 aa  74.3  0.000000000001  Burkholderia pseudomallei 668  Bacteria  normal  0.317505  n/a   
 
 
-
 
NC_009049  Rsph17029_2750  short-chain dehydrogenase/reductase SDR  30.67 
 
 
245 aa  74.3  0.000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0379321  normal 
 
 
-
 
NC_008836  BMA10229_A2000  short chain dehydrogenase  32.34 
 
 
259 aa  74.3  0.000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_0727  short-chain dehydrogenase/reductase SDR  28.07 
 
 
245 aa  74.7  0.000000000001  Psychrobacter cryohalolentis K5  Bacteria  decreased coverage  0.00978147  normal 
 
 
-
 
NC_008254  Meso_1768  3-ketoacyl-(acyl-carrier-protein) reductase NodG  32.1 
 
 
245 aa  74.7  0.000000000001  Chelativorans sp. BNC1  Bacteria  normal  0.323162  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3096  short chain dehydrogenase  32.34 
 
 
259 aa  74.3  0.000000000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2288  short chain dehydrogenase  32.34 
 
 
259 aa  74.3  0.000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4421  short chain dehydrogenase  28.43 
 
 
249 aa  73.9  0.000000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.794825 
 
 
-
 
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