17 homologs were found in PanDaTox collection
for query gene Lferr_2505 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_2505  transcriptional modulator of MazE/toxin, MazF  100 
 
 
102 aa  213  5e-55  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2885  PemK family protein  100 
 
 
127 aa  212  9.999999999999999e-55  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.670266  n/a   
 
 
-
 
NC_009483  Gura_1479  transcriptional modulator of MazE/toxin, MazF  73.2 
 
 
133 aa  152  1e-36  Geobacter uraniireducens Rf4  Bacteria  normal  0.937669  n/a   
 
 
-
 
NC_012918  GM21_2583  transcriptional modulator of MazE/toxin, MazF  69 
 
 
134 aa  150  7e-36  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009436  Ent638_2067  toxin ChpA  42.42 
 
 
108 aa  48.1  0.00004  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010488  EcSMS35_A0164  stable plasmid inheritance protein PemK  31.52 
 
 
121 aa  46.6  0.0001  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000268925  normal 
 
 
-
 
NC_007514  Cag_0429  transcriptional modulator of MazE/toxin, MazF  34.78 
 
 
116 aa  45.8  0.0002  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1107  transcriptional modulator of MazE/toxin, MazF  39.71 
 
 
113 aa  46.2  0.0002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1021  transcriptional modulator of MazE/toxin, MazF  41.18 
 
 
115 aa  45.4  0.0003  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000310459  unclonable  0.00000000357935 
 
 
-
 
NC_010338  Caul_3898  toxin ChpA  34.41 
 
 
110 aa  43.5  0.001  Caulobacter sp. K31  Bacteria  normal  0.363948  normal  0.172464 
 
 
-
 
NC_011989  Avi_3503  plasmid stable inheritance protein K  31.52 
 
 
103 aa  43.5  0.001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_0785  transcriptional modulator of MazE/toxin, MazF  39.44 
 
 
123 aa  42.4  0.002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0655537 
 
 
-
 
NC_011060  Ppha_0265  transcriptional modulator of MazE/toxin, MazF  30.61 
 
 
111 aa  41.6  0.003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4869  transcriptional modulator of MazE/toxin, MazF  30.77 
 
 
148 aa  42  0.003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.536474  unclonable  0.0000000999645 
 
 
-
 
NC_013165  Shel_12680  growth inhibitor  33.8 
 
 
124 aa  40.4  0.008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009471  Acry_3598  transcriptional modulator of MazE/toxin, MazF  39.44 
 
 
108 aa  40.4  0.009  Acidiphilium cryptum JF-5  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5124  transcriptional modulator of MazE/toxin, MazF  37.21 
 
 
108 aa  40.4  0.009  Ralstonia pickettii 12D  Bacteria  normal  normal  0.067207 
 
 
-
 
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