6 homologs were found in PanDaTox collection
for query gene Lferr_2204 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_2204  hypothetical protein  100 
 
 
490 aa  980    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.0054085  normal  0.0499119 
 
 
-
 
NC_011761  AFE_2574  hypothetical protein  100 
 
 
490 aa  980    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0316091  n/a   
 
 
-
 
NC_011206  Lferr_2518  hypothetical protein  46.94 
 
 
318 aa  79.3  0.0000000000001  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2900  hypothetical protein  46.94 
 
 
318 aa  79.3  0.0000000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_1730  Tfp pilus assembly protein FimV-like protein  26.67 
 
 
731 aa  45.4  0.002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0317233  hitchhiker  0.00941699 
 
 
-
 
NC_011761  AFE_2072  hypothetical protein  26.67 
 
 
722 aa  45.4  0.002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.813162  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>